BLASTX nr result

ID: Papaver23_contig00032011 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Papaver23_contig00032011
         (560 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_003607639.1| F-box/LRR-repeat protein [Medicago truncatul...    86   3e-15
emb|CAN74740.1| hypothetical protein VITISV_040899 [Vitis vinifera]    79   4e-13
ref|XP_003599874.1| F-box family-3 [Medicago truncatula] gi|3554...    77   2e-12
emb|CBI32913.3| unnamed protein product [Vitis vinifera]               72   5e-11
ref|NP_001154750.1| RNI-like/FBD-like domain-containing protein ...    64   2e-08

>ref|XP_003607639.1| F-box/LRR-repeat protein [Medicago truncatula]
           gi|355508694|gb|AES89836.1| F-box/LRR-repeat protein
           [Medicago truncatula]
          Length = 467

 Score = 86.3 bits (212), Expect = 3e-15
 Identities = 59/178 (33%), Positives = 94/178 (52%)
 Frame = -3

Query: 555 PRLKHLELHEVVFSDEHNNEQLFSDCPVLEELMLENCYWSSMKNLCISAPALRILKIWGV 376
           P LK L    V F++E + ++LFS CPVL++L  E CYW ++ N+ ++ P L+ L     
Sbjct: 171 PSLKILSFAHVTFTNEKSAQRLFSGCPVLQDLSFEKCYWVNI-NISVAIPTLKKL----- 224

Query: 375 DDCYRWDNSNGLQGCGLKIDAPNLVSLSY*CDLAKEQAISSFQALVDADLDFNFDKHVGD 196
            D +   +S     C  KIDA NL+SLSY  +      + +  ++VDA++D  F     +
Sbjct: 225 -DIFFRSSSLDRNSCMFKIDAVNLLSLSYKSNPTINCFLVNSTSIVDANIDLGFFCVQNN 283

Query: 195 AIRRLYVIDFGAVASRFFQALSHVKCLSISDRVLRALSCVKDLKNHLPTFHHLKQLNV 22
               L+V  F   A   F  L  V+ L +SD+ ++ L+  K   + LP+F +L +L V
Sbjct: 284 ---ELHVAVF---AIELFSRLGSVESLRLSDQTIQCLNYAKSALHLLPSFKNLTRLEV 335


>emb|CAN74740.1| hypothetical protein VITISV_040899 [Vitis vinifera]
          Length = 607

 Score = 79.3 bits (194), Expect = 4e-13
 Identities = 58/177 (32%), Positives = 91/177 (51%), Gaps = 1/177 (0%)
 Frame = -3

Query: 555 PRLKHLELHEVVFSDEHNNEQLFSDCPVLEELMLENCYWSSMKNLCISAPALRILKIWGV 376
           P LK L L  V +SD+ + ++L S CPVLEEL++E     +   + +S P+L+IL+I+  
Sbjct: 163 PSLKALHLKSVEYSDDDSIQKLLSGCPVLEELVIEREERDNQWVVNVSNPSLKILRIFFF 222

Query: 375 DDCYRWDNSNGLQGCGLKIDAPNLVSLSY*CDLAKEQAISSFQALVDADLDFNFDKHVGD 196
            D +        Q   + +DAPNL  LS    L+K+  +    +LV A +D   D    +
Sbjct: 223 TDGFAHPYEQEDQDYKVVVDAPNLEYLSITDYLSKDYFVKDLPSLVKAFIDVEQDSEEFE 282

Query: 195 AIRRLYVIDFGAVASRFFQALSHVKCLSISDRVLRALS-CVKDLKNHLPTFHHLKQL 28
                  I +          +S+VKCLS++   L +LS  + D K  LPTFH++ +L
Sbjct: 283 ESPHNGGISYHGPIYELLGRISNVKCLSLTGVTLDSLSGTIGDYK--LPTFHNMTRL 337


>ref|XP_003599874.1| F-box family-3 [Medicago truncatula] gi|355488922|gb|AES70125.1|
           F-box family-3 [Medicago truncatula]
          Length = 642

 Score = 76.6 bits (187), Expect = 2e-12
 Identities = 63/185 (34%), Positives = 94/185 (50%), Gaps = 7/185 (3%)
 Frame = -3

Query: 555 PRLKHLELHEVVFSDEHNNEQLFSDCPVLEELMLENCYWSSMKNLCISAPALRILKIWGV 376
           P LK L +  V F++E++ +QLFS CPVL+EL L+NCYW  +  + +S   LR L I  +
Sbjct: 336 PILKTLVVTNVTFANENSAQQLFSGCPVLQELELDNCYWEHINQISLSISTLRKLTISYL 395

Query: 375 DDCYRWDNSNGLQGCGLKIDAPNLVSLSY*CDLAKEQAISSFQALVDADLDFNFDKHVGD 196
             C  +D+        LKIDA NL+SL   C+   E    +  +LVDA +   +      
Sbjct: 396 MLCVDYDHI-----MKLKIDAVNLLSLYCICNPIIEVIPVNLTSLVDAFIFLGY------ 444

Query: 195 AIRRLYVID--FGAVAS-RFFQALSHVKCLSISDRVLRAL-SCVKDLKNH---LPTFHHL 37
               +Y  D  + A  S    + L  VK L ++D +L +    + +L  H   LPTF++L
Sbjct: 445 ----VYPHDEPYAAQCSIELLKGLGSVKSLKLNDIILMSFYHTLDNLHLHLLPLPTFYNL 500

Query: 36  KQLNV 22
             L V
Sbjct: 501 THLYV 505


>emb|CBI32913.3| unnamed protein product [Vitis vinifera]
          Length = 348

 Score = 72.4 bits (176), Expect = 5e-11
 Identities = 53/173 (30%), Positives = 84/173 (48%)
 Frame = -3

Query: 555 PRLKHLELHEVVFSDEHNNEQLFSDCPVLEELMLENCYWSSMKNLCISAPALRILKIWGV 376
           P LK L L  V +SD+ + ++L S CPVLEEL++E     +   + +S P+L+IL+I+  
Sbjct: 140 PSLKALHLKSVEYSDDDSIQKLLSGCPVLEELVIEREERDNQWVVNVSNPSLKILRIFFF 199

Query: 375 DDCYRWDNSNGLQGCGLKIDAPNLVSLSY*CDLAKEQAISSFQALVDADLDFNFDKHVGD 196
            D +        Q   + +DAPNL  LS    L+K+  +    +LV A +D   D    +
Sbjct: 200 TDGFAHPYEQEDQDYKVVVDAPNLEYLSITDYLSKDYFVKDLPSLVKAFIDVEQDSEEFE 259

Query: 195 AIRRLYVIDFGAVASRFFQALSHVKCLSISDRVLRALSCVKDLKNHLPTFHHL 37
                  I +          +S+VKCLS++   L        +   LPTFH++
Sbjct: 260 ESPHNGGISYHGPIYELLGRISNVKCLSLTGVTLDVSFLCPPI---LPTFHNM 309


>ref|NP_001154750.1| RNI-like/FBD-like domain-containing protein [Arabidopsis thaliana]
           gi|332006645|gb|AED94028.1| RNI-like/FBD-like
           domain-containing protein [Arabidopsis thaliana]
          Length = 368

 Score = 63.5 bits (153), Expect = 2e-08
 Identities = 55/185 (29%), Positives = 81/185 (43%), Gaps = 13/185 (7%)
 Frame = -3

Query: 555 PRLKHLELHEVVFSDEHNNEQLFSDCPVLEELMLENCYW--SSMKNLC---ISAPALRIL 391
           P+LK L L          N+ L S C  LEEL+L N  W  SS   +C   +S P L+ L
Sbjct: 83  PKLKTLHLDYFKIEPSKFNK-LLSGCHALEELVLINLMWADSSGYKVCPVTVSIPTLKRL 141

Query: 390 KIWGVDDCYR--------WDNSNGLQGCGLKIDAPNLVSLSY*CDLAKEQAISSFQALVD 235
           K    +D Y         +D  N  +G  L  D PNLV L Y   +  +     F +LV+
Sbjct: 142 KFCRSEDFYEGKFHEYEDYDEENIKKGVSLSFDNPNLVYLEYSDVIVDKYKQVRFDSLVE 201

Query: 234 ADLDFNFDKHVGDAIRRLYVIDFGAVASRFFQALSHVKCLSISDRVLRALSCVKDLKNHL 55
           A+L    ++   D I            ++    L +VK L +S+ +L  L+C ++    +
Sbjct: 202 ANLGLRKNQAEPDKIN----------VTKLLMGLHNVKILYLSNDILEVLACCRE---RI 248

Query: 54  PTFHH 40
           P  HH
Sbjct: 249 PGLHH 253


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