BLASTX nr result

ID: Papaver23_contig00031683 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Papaver23_contig00031683
         (548 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002283769.2| PREDICTED: uncharacterized protein LOC100245...    77   1e-12
ref|XP_002894510.1| hypothetical protein ARALYDRAFT_337635 [Arab...    74   1e-11
ref|NP_001117499.2| Nuclear pore complex protein [Arabidopsis th...    71   1e-10
ref|NP_564694.2| Nuclear pore complex protein [Arabidopsis thali...    71   1e-10
gb|AAD10642.1| Hypothetical protein [Arabidopsis thaliana]             71   1e-10

>ref|XP_002283769.2| PREDICTED: uncharacterized protein LOC100245011 [Vitis vinifera]
          Length = 1696

 Score = 77.4 bits (189), Expect = 1e-12
 Identities = 49/110 (44%), Positives = 59/110 (53%), Gaps = 5/110 (4%)
 Frame = -2

Query: 535  KSNTFGGLFGNSRESNAGNPS--PYTLTQPAGQLFRPASFSINTSQPAQP---TNPAPFS 371
            K   FGG FG    +   NP+  P+T+T P+G+LFRPASF+  + QP+QP   TN   FS
Sbjct: 1485 KPTPFGGPFGGQFVNAGTNPASTPFTMTVPSGELFRPASFNFQSPQPSQPPQSTNLGAFS 1544

Query: 370  GGAFTXXXXXXXXXXXGFXXXXXXXXXXXXXGSVLGSFGQSRQFGTGLPG 221
            GG              GF             GSVLG+FGQSRQFG GLPG
Sbjct: 1545 GG-INAGITAQAPARSGFGQLAQIGAGQQALGSVLGAFGQSRQFGAGLPG 1593


>ref|XP_002894510.1| hypothetical protein ARALYDRAFT_337635 [Arabidopsis lyrata subsp.
            lyrata] gi|297340352|gb|EFH70769.1| hypothetical protein
            ARALYDRAFT_337635 [Arabidopsis lyrata subsp. lyrata]
          Length = 1825

 Score = 73.9 bits (180), Expect = 1e-11
 Identities = 45/105 (42%), Positives = 54/105 (51%)
 Frame = -2

Query: 535  KSNTFGGLFGNSRESNAGNPSPYTLTQPAGQLFRPASFSINTSQPAQPTNPAPFSGGAFT 356
            KSN FGG FGN+  +   NP  + +T P+G+LF+PASF+    QP+QP     FS     
Sbjct: 1580 KSNPFGGPFGNATTTTTSNP--FNMTVPSGELFKPASFNFQNPQPSQPAGFGAFS----- 1632

Query: 355  XXXXXXXXXXXGFXXXXXXXXXXXXXGSVLGSFGQSRQFGTGLPG 221
                       GF             GSVLGSFGQSRQ G GLPG
Sbjct: 1633 -VTPSQTPAQSGFGQPSQIGGGQQALGSVLGSFGQSRQIGAGLPG 1676


>ref|NP_001117499.2| Nuclear pore complex protein [Arabidopsis thaliana]
            gi|332195142|gb|AEE33263.1| Nuclear pore complex protein
            [Arabidopsis thaliana]
          Length = 1819

 Score = 70.9 bits (172), Expect = 1e-10
 Identities = 43/105 (40%), Positives = 55/105 (52%)
 Frame = -2

Query: 535  KSNTFGGLFGNSRESNAGNPSPYTLTQPAGQLFRPASFSINTSQPAQPTNPAPFSGGAFT 356
            K+N FGG FGN+  + +   +P+ +T P+G+LF+PASF+    QP+QP     FS     
Sbjct: 1574 KTNPFGGPFGNATTTTS---NPFNMTVPSGELFKPASFNFQNPQPSQPAGFGSFS----- 1625

Query: 355  XXXXXXXXXXXGFXXXXXXXXXXXXXGSVLGSFGQSRQFGTGLPG 221
                       GF             GSVLGSFGQSRQ G GLPG
Sbjct: 1626 -VTPSQTPAQSGFGQPSQIGGGQQALGSVLGSFGQSRQIGAGLPG 1669


>ref|NP_564694.2| Nuclear pore complex protein [Arabidopsis thaliana]
            gi|332195141|gb|AEE33262.1| Nuclear pore complex protein
            [Arabidopsis thaliana]
          Length = 1816

 Score = 70.9 bits (172), Expect = 1e-10
 Identities = 43/105 (40%), Positives = 55/105 (52%)
 Frame = -2

Query: 535  KSNTFGGLFGNSRESNAGNPSPYTLTQPAGQLFRPASFSINTSQPAQPTNPAPFSGGAFT 356
            K+N FGG FGN+  + +   +P+ +T P+G+LF+PASF+    QP+QP     FS     
Sbjct: 1571 KTNPFGGPFGNATTTTS---NPFNMTVPSGELFKPASFNFQNPQPSQPAGFGSFS----- 1622

Query: 355  XXXXXXXXXXXGFXXXXXXXXXXXXXGSVLGSFGQSRQFGTGLPG 221
                       GF             GSVLGSFGQSRQ G GLPG
Sbjct: 1623 -VTPSQTPAQSGFGQPSQIGGGQQALGSVLGSFGQSRQIGAGLPG 1666


>gb|AAD10642.1| Hypothetical protein [Arabidopsis thaliana]
          Length = 1804

 Score = 70.9 bits (172), Expect = 1e-10
 Identities = 43/105 (40%), Positives = 55/105 (52%)
 Frame = -2

Query: 535  KSNTFGGLFGNSRESNAGNPSPYTLTQPAGQLFRPASFSINTSQPAQPTNPAPFSGGAFT 356
            K+N FGG FGN+  + +   +P+ +T P+G+LF+PASF+    QP+QP     FS     
Sbjct: 1559 KTNPFGGPFGNATTTTS---NPFNMTVPSGELFKPASFNFQNPQPSQPAGFGSFS----- 1610

Query: 355  XXXXXXXXXXXGFXXXXXXXXXXXXXGSVLGSFGQSRQFGTGLPG 221
                       GF             GSVLGSFGQSRQ G GLPG
Sbjct: 1611 -VTPSQTPAQSGFGQPSQIGGGQQALGSVLGSFGQSRQIGAGLPG 1654


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