BLASTX nr result

ID: Papaver23_contig00031678 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Papaver23_contig00031678
         (781 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002523056.1| DNA mismatch repair protein pms2, putative [...   423   e-116
ref|XP_002321013.1| predicted protein [Populus trichocarpa] gi|2...   411   e-113
emb|CBI36837.3| unnamed protein product [Vitis vinifera]              405   e-111
ref|XP_002267393.1| PREDICTED: mismatch repair endonuclease PMS2...   405   e-111
ref|XP_003536886.1| PREDICTED: mismatch repair endonuclease PMS2...   404   e-110

>ref|XP_002523056.1| DNA mismatch repair protein pms2, putative [Ricinus communis]
           gi|223537618|gb|EEF39241.1| DNA mismatch repair protein
           pms2, putative [Ricinus communis]
          Length = 924

 Score =  423 bits (1087), Expect = e-116
 Identities = 208/251 (82%), Positives = 235/251 (93%)
 Frame = -1

Query: 754 VPNEAMIKPINKSVVHRICSGQVILDLSSAVKELVENSLDAGATSIEISLKDYGEESFKI 575
           + N  +IKPINK VVHRIC+GQVILDLSSAVKELVENSLDAGATSIEISLKDYGE+SF++
Sbjct: 3   ISNSPIIKPINKGVVHRICAGQVILDLSSAVKELVENSLDAGATSIEISLKDYGEDSFQV 62

Query: 574 IDNGCGISPNNFKVLALKHHTSKIADFPDLQSLTTFGFRGEALSSLCALGKLTVETRTKH 395
           IDNGCG+SPNNFKVLALKHHTSK+ADFPDLQSLTTFGFRGEALSSLCALG+LTVETRTK+
Sbjct: 63  IDNGCGVSPNNFKVLALKHHTSKLADFPDLQSLTTFGFRGEALSSLCALGELTVETRTKN 122

Query: 394 ESVASHLTFDHSGLLTCEKKTARPIGTTVTVEKLFSTLPVRGKEFSRNIRREYGKLISLL 215
           ESVA+HL++D SGLLT EKKTAR IGTTVTV+KLFS LPVR KEFSRNIR+EYGKLISLL
Sbjct: 123 ESVATHLSYDRSGLLTAEKKTARQIGTTVTVKKLFSNLPVRSKEFSRNIRKEYGKLISLL 182

Query: 214 NAYALIAKGVRIVCTNTTGKNTKSVAIKTQGSNSMKDNIITVFGNNIFTCLEPLSISISD 35
           NAYALIAKGVR++CTNTTG+N K V +KTQG++S+KDNIITVFG + F+CLEP+SI ISD
Sbjct: 183 NAYALIAKGVRLLCTNTTGRNAKIVVLKTQGTDSLKDNIITVFGMSTFSCLEPVSICISD 242

Query: 34  SCEVEGFLSKP 2
            C+V+GFLSKP
Sbjct: 243 CCKVDGFLSKP 253


>ref|XP_002321013.1| predicted protein [Populus trichocarpa] gi|222861786|gb|EEE99328.1|
           predicted protein [Populus trichocarpa]
          Length = 915

 Score =  411 bits (1056), Expect = e-113
 Identities = 204/244 (83%), Positives = 227/244 (93%)
 Frame = -1

Query: 736 IKPINKSVVHRICSGQVILDLSSAVKELVENSLDAGATSIEISLKDYGEESFKIIDNGCG 557
           I+PINK+ VHRIC+GQVILDLSSAVKELVENSLDAGATSIEISLKDYG ESF++IDNGCG
Sbjct: 8   IRPINKAAVHRICAGQVILDLSSAVKELVENSLDAGATSIEISLKDYGLESFQVIDNGCG 67

Query: 556 ISPNNFKVLALKHHTSKIADFPDLQSLTTFGFRGEALSSLCALGKLTVETRTKHESVASH 377
           +SPNNFKVLALKHHTSK+ DF DLQSLTTFGFRGEALSSLC LG LTVETRTK+E VA+H
Sbjct: 68  VSPNNFKVLALKHHTSKLGDFHDLQSLTTFGFRGEALSSLCVLGDLTVETRTKNEPVATH 127

Query: 376 LTFDHSGLLTCEKKTARPIGTTVTVEKLFSTLPVRGKEFSRNIRREYGKLISLLNAYALI 197
           LTF+HSGLLT E+KTAR +GTTVTV+KLFS+LPVR KEFSRNIR+EYGKLISLLNAYALI
Sbjct: 128 LTFNHSGLLTAERKTARQVGTTVTVKKLFSSLPVRSKEFSRNIRKEYGKLISLLNAYALI 187

Query: 196 AKGVRIVCTNTTGKNTKSVAIKTQGSNSMKDNIITVFGNNIFTCLEPLSISISDSCEVEG 17
           +KGVRIVC+NTTGKN KSV +KTQGS+S+KDNIITVFG N F+CLEP+ I IS SC+VEG
Sbjct: 188 SKGVRIVCSNTTGKNAKSVVLKTQGSDSLKDNIITVFGVNTFSCLEPVDIDISGSCKVEG 247

Query: 16  FLSK 5
           FLSK
Sbjct: 248 FLSK 251


>emb|CBI36837.3| unnamed protein product [Vitis vinifera]
          Length = 854

 Score =  405 bits (1042), Expect = e-111
 Identities = 204/254 (80%), Positives = 226/254 (88%)
 Frame = -1

Query: 766 KGGGVPNEAMIKPINKSVVHRICSGQVILDLSSAVKELVENSLDAGATSIEISLKDYGEE 587
           +G        I+ INK  VHRICSGQVILDLSSAVKELVENSLDAGATSIEI+LK+YG+E
Sbjct: 2   EGAAQSESPTIRAINKGAVHRICSGQVILDLSSAVKELVENSLDAGATSIEIALKEYGQE 61

Query: 586 SFKIIDNGCGISPNNFKVLALKHHTSKIADFPDLQSLTTFGFRGEALSSLCALGKLTVET 407
            F++IDNGCGISPNNFKVLALKHHTSK+ DFPDLQSLTTFGFRGEALSSLCALG LTVET
Sbjct: 62  WFQVIDNGCGISPNNFKVLALKHHTSKLIDFPDLQSLTTFGFRGEALSSLCALGNLTVET 121

Query: 406 RTKHESVASHLTFDHSGLLTCEKKTARPIGTTVTVEKLFSTLPVRGKEFSRNIRREYGKL 227
           RTK+ESVA+HLTFDHSGLL  EKKTAR IGTTVTV+KLFS LPVR KEFSRNIR+EYGKL
Sbjct: 122 RTKNESVATHLTFDHSGLLRDEKKTARQIGTTVTVKKLFSNLPVRSKEFSRNIRKEYGKL 181

Query: 226 ISLLNAYALIAKGVRIVCTNTTGKNTKSVAIKTQGSNSMKDNIITVFGNNIFTCLEPLSI 47
           ISLL+AYALIA GVR+VCTNTTGKN KS+ +KTQGS S+KDNIITVFG N F CLEPL+I
Sbjct: 182 ISLLSAYALIAGGVRLVCTNTTGKNVKSMVLKTQGSGSLKDNIITVFGMNTFNCLEPLNI 241

Query: 46  SISDSCEVEGFLSK 5
            +SDS +V+GF+SK
Sbjct: 242 CLSDSSKVDGFVSK 255


>ref|XP_002267393.1| PREDICTED: mismatch repair endonuclease PMS2-like [Vitis vinifera]
          Length = 937

 Score =  405 bits (1042), Expect = e-111
 Identities = 204/254 (80%), Positives = 226/254 (88%)
 Frame = -1

Query: 766 KGGGVPNEAMIKPINKSVVHRICSGQVILDLSSAVKELVENSLDAGATSIEISLKDYGEE 587
           +G        I+ INK  VHRICSGQVILDLSSAVKELVENSLDAGATSIEI+LK+YG+E
Sbjct: 2   EGAAQSESPTIRAINKGAVHRICSGQVILDLSSAVKELVENSLDAGATSIEIALKEYGQE 61

Query: 586 SFKIIDNGCGISPNNFKVLALKHHTSKIADFPDLQSLTTFGFRGEALSSLCALGKLTVET 407
            F++IDNGCGISPNNFKVLALKHHTSK+ DFPDLQSLTTFGFRGEALSSLCALG LTVET
Sbjct: 62  WFQVIDNGCGISPNNFKVLALKHHTSKLIDFPDLQSLTTFGFRGEALSSLCALGNLTVET 121

Query: 406 RTKHESVASHLTFDHSGLLTCEKKTARPIGTTVTVEKLFSTLPVRGKEFSRNIRREYGKL 227
           RTK+ESVA+HLTFDHSGLL  EKKTAR IGTTVTV+KLFS LPVR KEFSRNIR+EYGKL
Sbjct: 122 RTKNESVATHLTFDHSGLLRDEKKTARQIGTTVTVKKLFSNLPVRSKEFSRNIRKEYGKL 181

Query: 226 ISLLNAYALIAKGVRIVCTNTTGKNTKSVAIKTQGSNSMKDNIITVFGNNIFTCLEPLSI 47
           ISLL+AYALIA GVR+VCTNTTGKN KS+ +KTQGS S+KDNIITVFG N F CLEPL+I
Sbjct: 182 ISLLSAYALIAGGVRLVCTNTTGKNVKSMVLKTQGSGSLKDNIITVFGMNTFNCLEPLNI 241

Query: 46  SISDSCEVEGFLSK 5
            +SDS +V+GF+SK
Sbjct: 242 CLSDSSKVDGFVSK 255


>ref|XP_003536886.1| PREDICTED: mismatch repair endonuclease PMS2-like [Glycine max]
          Length = 944

 Score =  404 bits (1037), Expect = e-110
 Identities = 201/245 (82%), Positives = 224/245 (91%)
 Frame = -1

Query: 739 MIKPINKSVVHRICSGQVILDLSSAVKELVENSLDAGATSIEISLKDYGEESFKIIDNGC 560
           +IKPI K +VHRIC+GQVILDLSSAVKELVENSLDAGATSIEISLKD+GE+ F++IDNGC
Sbjct: 7   IIKPIGKGIVHRICAGQVILDLSSAVKELVENSLDAGATSIEISLKDFGEQWFQVIDNGC 66

Query: 559 GISPNNFKVLALKHHTSKIADFPDLQSLTTFGFRGEALSSLCALGKLTVETRTKHESVAS 380
           GISPNNFKVLALKHHTSK+A+F DLQSLTTFGFRGEALSSLCALG LTVETRT  E VA+
Sbjct: 67  GISPNNFKVLALKHHTSKLAEFHDLQSLTTFGFRGEALSSLCALGNLTVETRTASEPVAT 126

Query: 379 HLTFDHSGLLTCEKKTARPIGTTVTVEKLFSTLPVRGKEFSRNIRREYGKLISLLNAYAL 200
           HLTFD SG+L  E+KTAR IGTTV V+KLFS+LPVR KEFSRNIRREYGKL+SLLNAYAL
Sbjct: 127 HLTFDSSGVLVAERKTARQIGTTVMVKKLFSSLPVRSKEFSRNIRREYGKLVSLLNAYAL 186

Query: 199 IAKGVRIVCTNTTGKNTKSVAIKTQGSNSMKDNIITVFGNNIFTCLEPLSISISDSCEVE 20
           IAKGVR VCTNTTGKN +SV +KTQGS S+KDNIITV G N F+CLEP+++SISDSC+VE
Sbjct: 187 IAKGVRFVCTNTTGKNVRSVVLKTQGSGSLKDNIITVLGMNTFSCLEPVTLSISDSCKVE 246

Query: 19  GFLSK 5
           GFLSK
Sbjct: 247 GFLSK 251


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