BLASTX nr result

ID: Papaver23_contig00031675 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Papaver23_contig00031675
         (519 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_003523172.1| PREDICTED: chaperone protein ClpC, chloropla...    60   2e-07
ref|XP_003532383.1| PREDICTED: chaperone protein ClpC, chloropla...    59   4e-07
ref|XP_003525431.1| PREDICTED: chaperone protein ClpC, chloropla...    59   4e-07
ref|XP_004152900.1| PREDICTED: chaperone protein ClpC, chloropla...    59   5e-07
ref|XP_003526929.1| PREDICTED: chaperone protein ClpC, chloropla...    59   5e-07

>ref|XP_003523172.1| PREDICTED: chaperone protein ClpC, chloroplastic-like isoform 1
           [Glycine max] gi|356508863|ref|XP_003523173.1|
           PREDICTED: chaperone protein ClpC, chloroplastic-like
           isoform 2 [Glycine max]
          Length = 922

 Score = 60.1 bits (144), Expect = 2e-07
 Identities = 47/118 (39%), Positives = 61/118 (51%), Gaps = 13/118 (11%)
 Frame = -1

Query: 462 TLFMKGQELSNAESELGDTVQL*PKLIFHHIVASCLQLSYLRYNT------------LYT 319
           TL  KG+E+S AESE GD   +  +    HIV+S   +   + +T            L+ 
Sbjct: 547 TLVEKGKEMSKAESEAGDASPVVTEADIQHIVSSWTGIPVEKVSTDESDRLLKMEETLHK 606

Query: 318 GVIGQGDAVKATSCAIRRALVALTSKSSP-ASFIVSALALTGKSEFEIATRFLLFIFG 148
            VIGQ +AVKA S AIRRA V L + + P ASFI S     GKS  E+A     + FG
Sbjct: 607 RVIGQDEAVKAISRAIRRARVGLKNPNRPIASFIFSGPTGVGKS--ELAKALAAYYFG 662


>ref|XP_003532383.1| PREDICTED: chaperone protein ClpC, chloroplastic-like [Glycine max]
          Length = 919

 Score = 58.9 bits (141), Expect = 4e-07
 Identities = 46/117 (39%), Positives = 61/117 (52%), Gaps = 13/117 (11%)
 Frame = -1

Query: 459 LFMKGQELSNAESELGDTVQL*PKLIFHHIVASCLQLSYLRYNT------------LYTG 316
           L  KG+E+S AESE GD   +  ++   HIV+S   +   + +T            L+  
Sbjct: 545 LIEKGKEMSKAESEAGDEGPMVTEVDIQHIVSSWTGIPVEKVSTDESDRLLKMEETLHKR 604

Query: 315 VIGQGDAVKATSCAIRRALVALTSKSSP-ASFIVSALALTGKSEFEIATRFLLFIFG 148
           VIGQ +AVKA S AIRRA V L + + P ASFI S     GKS  E+A     + FG
Sbjct: 605 VIGQDEAVKAISRAIRRARVGLKNPNRPIASFIFSGPTGVGKS--ELAKALAAYYFG 659


>ref|XP_003525431.1| PREDICTED: chaperone protein ClpC, chloroplastic-like [Glycine max]
          Length = 919

 Score = 58.9 bits (141), Expect = 4e-07
 Identities = 46/117 (39%), Positives = 61/117 (52%), Gaps = 13/117 (11%)
 Frame = -1

Query: 459 LFMKGQELSNAESELGDTVQL*PKLIFHHIVASCLQLSYLRYNT------------LYTG 316
           L  KG+E+S AESE GD   +  ++   HIV+S   +   + +T            L+  
Sbjct: 545 LIEKGKEMSKAESEAGDEGPMVTEVDIQHIVSSWTGIPVEKVSTDESDRLLKMEETLHKR 604

Query: 315 VIGQGDAVKATSCAIRRALVALTSKSSP-ASFIVSALALTGKSEFEIATRFLLFIFG 148
           VIGQ +AVKA S AIRRA V L + + P ASFI S     GKS  E+A     + FG
Sbjct: 605 VIGQDEAVKAISRAIRRARVGLKNPNRPIASFIFSGPTGVGKS--ELAKALAAYYFG 659


>ref|XP_004152900.1| PREDICTED: chaperone protein ClpC, chloroplastic-like [Cucumis
           sativus] gi|449505877|ref|XP_004162592.1| PREDICTED:
           chaperone protein ClpC, chloroplastic-like [Cucumis
           sativus]
          Length = 924

 Score = 58.5 bits (140), Expect = 5e-07
 Identities = 46/117 (39%), Positives = 61/117 (52%), Gaps = 13/117 (11%)
 Frame = -1

Query: 459 LFMKGQELSNAESELGDTVQL*PKLIFHHIVASCLQLSYLRYNT------------LYTG 316
           L  KG+E+S AESE GD   +  ++   HIV+S   +   + +T            L+  
Sbjct: 549 LIDKGKEMSKAESEAGDVGPVVTEVDIQHIVSSWTGIPVEKVSTDESDRLLKMEETLHRR 608

Query: 315 VIGQGDAVKATSCAIRRALVALTSKSSP-ASFIVSALALTGKSEFEIATRFLLFIFG 148
           VIGQ +AVKA S AIRRA V L + + P ASFI S     GKS  E+A     + FG
Sbjct: 609 VIGQDEAVKAISRAIRRARVGLKNPNRPIASFIFSGPTGVGKS--ELAKALAAYYFG 663


>ref|XP_003526929.1| PREDICTED: chaperone protein ClpC, chloroplastic-like [Glycine max]
          Length = 922

 Score = 58.5 bits (140), Expect = 5e-07
 Identities = 46/118 (38%), Positives = 61/118 (51%), Gaps = 13/118 (11%)
 Frame = -1

Query: 462 TLFMKGQELSNAESELGDTVQL*PKLIFHHIVASCLQLSYLRYNT------------LYT 319
           TL  KG+E+S AE+E GD   +  +    HIV+S   +   + +T            L+ 
Sbjct: 547 TLVEKGKEMSKAETEAGDEGPIVTEADIQHIVSSWTGIPVEKVSTDESDRLLKMEETLHK 606

Query: 318 GVIGQGDAVKATSCAIRRALVALTSKSSP-ASFIVSALALTGKSEFEIATRFLLFIFG 148
            VIGQ +AVKA S AIRRA V L + + P ASFI S     GKS  E+A     + FG
Sbjct: 607 RVIGQDEAVKAISRAIRRARVGLKNPNRPIASFIFSGPTGVGKS--ELAKALAAYYFG 662


Top