BLASTX nr result

ID: Papaver23_contig00031669 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Papaver23_contig00031669
         (438 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

emb|CBI25132.3| unnamed protein product [Vitis vinifera]               64   2e-08
ref|XP_002271957.1| PREDICTED: ribosomal RNA small subunit methy...    64   2e-08
emb|CAN83371.1| hypothetical protein VITISV_034944 [Vitis vinifera]    64   2e-08
ref|XP_002300283.1| predicted protein [Populus trichocarpa] gi|2...    62   6e-08
ref|XP_003555302.1| PREDICTED: ribosomal RNA small subunit methy...    61   1e-07

>emb|CBI25132.3| unnamed protein product [Vitis vinifera]
          Length = 410

 Score = 63.5 bits (153), Expect = 2e-08
 Identities = 30/39 (76%), Positives = 33/39 (84%)
 Frame = +3

Query: 6   MMTEAGAIPVGLGPHRLRVETATMALPTTVMLWSDSQHP 122
           MM EAGA  VGLGPHRLRVETAT+AL  T+MLWSDS+ P
Sbjct: 369 MMREAGATAVGLGPHRLRVETATIALLATLMLWSDSERP 407


>ref|XP_002271957.1| PREDICTED: ribosomal RNA small subunit methyltransferase E-like
           [Vitis vinifera]
          Length = 287

 Score = 63.5 bits (153), Expect = 2e-08
 Identities = 30/39 (76%), Positives = 33/39 (84%)
 Frame = +3

Query: 6   MMTEAGAIPVGLGPHRLRVETATMALPTTVMLWSDSQHP 122
           MM EAGA  VGLGPHRLRVETAT+AL  T+MLWSDS+ P
Sbjct: 246 MMREAGATAVGLGPHRLRVETATIALLATLMLWSDSERP 284


>emb|CAN83371.1| hypothetical protein VITISV_034944 [Vitis vinifera]
          Length = 259

 Score = 63.5 bits (153), Expect = 2e-08
 Identities = 30/39 (76%), Positives = 33/39 (84%)
 Frame = +3

Query: 6   MMTEAGAIPVGLGPHRLRVETATMALPTTVMLWSDSQHP 122
           MM EAGA  VGLGPHRLRVETAT+AL  T+MLWSDS+ P
Sbjct: 218 MMREAGATAVGLGPHRLRVETATIALLATLMLWSDSERP 256


>ref|XP_002300283.1| predicted protein [Populus trichocarpa] gi|222847541|gb|EEE85088.1|
           predicted protein [Populus trichocarpa]
          Length = 212

 Score = 61.6 bits (148), Expect = 6e-08
 Identities = 30/37 (81%), Positives = 32/37 (86%)
 Frame = +3

Query: 6   MMTEAGAIPVGLGPHRLRVETATMALPTTVMLWSDSQ 116
           MM +AGA  VGLGPHRLRVETATMAL  T+MLWSDSQ
Sbjct: 176 MMMKAGASAVGLGPHRLRVETATMALLATLMLWSDSQ 212


>ref|XP_003555302.1| PREDICTED: ribosomal RNA small subunit methyltransferase E-like
           [Glycine max]
          Length = 281

 Score = 60.8 bits (146), Expect = 1e-07
 Identities = 30/37 (81%), Positives = 31/37 (83%)
 Frame = +3

Query: 6   MMTEAGAIPVGLGPHRLRVETATMALPTTVMLWSDSQ 116
           MM EAGA  V LGPHRLRVETAT+AL  TVMLWSDSQ
Sbjct: 222 MMMEAGATAVSLGPHRLRVETATIALLATVMLWSDSQ 258


Top