BLASTX nr result

ID: Papaver23_contig00031510 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Papaver23_contig00031510
         (718 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002283769.2| PREDICTED: uncharacterized protein LOC100245...    71   3e-10
ref|XP_002894510.1| hypothetical protein ARALYDRAFT_337635 [Arab...    69   1e-09
ref|NP_001117499.2| Nuclear pore complex protein [Arabidopsis th...    67   5e-09
ref|NP_564694.2| Nuclear pore complex protein [Arabidopsis thali...    67   5e-09
gb|AAD10642.1| Hypothetical protein [Arabidopsis thaliana]             67   5e-09

>ref|XP_002283769.2| PREDICTED: uncharacterized protein LOC100245011 [Vitis vinifera]
          Length = 1696

 Score = 70.9 bits (172), Expect = 3e-10
 Identities = 46/106 (43%), Positives = 53/106 (50%), Gaps = 6/106 (5%)
 Frame = +2

Query: 14   KSNPFGGPFGNSTEANAGN---SSPFTLSQPTEQLFRPASFNISTSQPAQP---TNPAPF 175
            K  PFGGPFG     NAG    S+PFT++ P+ +LFRPASFN  + QP+QP   TN   F
Sbjct: 1485 KPTPFGGPFGGQF-VNAGTNPASTPFTMTVPSGELFRPASFNFQSPQPSQPPQSTNLGAF 1543

Query: 176  SGGAFTXXXXXXXXXXXXXXXXXXXXXXXXXXXSVLGTFGQSRQFG 313
            SGG                              SVLG FGQSRQFG
Sbjct: 1544 SGG-INAGITAQAPARSGFGQLAQIGAGQQALGSVLGAFGQSRQFG 1588


>ref|XP_002894510.1| hypothetical protein ARALYDRAFT_337635 [Arabidopsis lyrata subsp.
            lyrata] gi|297340352|gb|EFH70769.1| hypothetical protein
            ARALYDRAFT_337635 [Arabidopsis lyrata subsp. lyrata]
          Length = 1825

 Score = 68.6 bits (166), Expect = 1e-09
 Identities = 40/100 (40%), Positives = 48/100 (48%)
 Frame = +2

Query: 14   KSNPFGGPFGNSTEANAGNSSPFTLSQPTEQLFRPASFNISTSQPAQPTNPAPFSGGAFT 193
            KSNPFGGPFGN+T     N  PF ++ P+ +LF+PASFN    QP+QP     FS     
Sbjct: 1580 KSNPFGGPFGNATTTTTSN--PFNMTVPSGELFKPASFNFQNPQPSQPAGFGAFS----- 1632

Query: 194  XXXXXXXXXXXXXXXXXXXXXXXXXXXSVLGTFGQSRQFG 313
                                       SVLG+FGQSRQ G
Sbjct: 1633 -VTPSQTPAQSGFGQPSQIGGGQQALGSVLGSFGQSRQIG 1671


>ref|NP_001117499.2| Nuclear pore complex protein [Arabidopsis thaliana]
            gi|332195142|gb|AEE33263.1| Nuclear pore complex protein
            [Arabidopsis thaliana]
          Length = 1819

 Score = 66.6 bits (161), Expect = 5e-09
 Identities = 39/100 (39%), Positives = 49/100 (49%)
 Frame = +2

Query: 14   KSNPFGGPFGNSTEANAGNSSPFTLSQPTEQLFRPASFNISTSQPAQPTNPAPFSGGAFT 193
            K+NPFGGPFGN+T      S+PF ++ P+ +LF+PASFN    QP+QP     FS     
Sbjct: 1574 KTNPFGGPFGNATTTT---SNPFNMTVPSGELFKPASFNFQNPQPSQPAGFGSFS----- 1625

Query: 194  XXXXXXXXXXXXXXXXXXXXXXXXXXXSVLGTFGQSRQFG 313
                                       SVLG+FGQSRQ G
Sbjct: 1626 -VTPSQTPAQSGFGQPSQIGGGQQALGSVLGSFGQSRQIG 1664


>ref|NP_564694.2| Nuclear pore complex protein [Arabidopsis thaliana]
            gi|332195141|gb|AEE33262.1| Nuclear pore complex protein
            [Arabidopsis thaliana]
          Length = 1816

 Score = 66.6 bits (161), Expect = 5e-09
 Identities = 39/100 (39%), Positives = 49/100 (49%)
 Frame = +2

Query: 14   KSNPFGGPFGNSTEANAGNSSPFTLSQPTEQLFRPASFNISTSQPAQPTNPAPFSGGAFT 193
            K+NPFGGPFGN+T      S+PF ++ P+ +LF+PASFN    QP+QP     FS     
Sbjct: 1571 KTNPFGGPFGNATTTT---SNPFNMTVPSGELFKPASFNFQNPQPSQPAGFGSFS----- 1622

Query: 194  XXXXXXXXXXXXXXXXXXXXXXXXXXXSVLGTFGQSRQFG 313
                                       SVLG+FGQSRQ G
Sbjct: 1623 -VTPSQTPAQSGFGQPSQIGGGQQALGSVLGSFGQSRQIG 1661


>gb|AAD10642.1| Hypothetical protein [Arabidopsis thaliana]
          Length = 1804

 Score = 66.6 bits (161), Expect = 5e-09
 Identities = 39/100 (39%), Positives = 49/100 (49%)
 Frame = +2

Query: 14   KSNPFGGPFGNSTEANAGNSSPFTLSQPTEQLFRPASFNISTSQPAQPTNPAPFSGGAFT 193
            K+NPFGGPFGN+T      S+PF ++ P+ +LF+PASFN    QP+QP     FS     
Sbjct: 1559 KTNPFGGPFGNATTTT---SNPFNMTVPSGELFKPASFNFQNPQPSQPAGFGSFS----- 1610

Query: 194  XXXXXXXXXXXXXXXXXXXXXXXXXXXSVLGTFGQSRQFG 313
                                       SVLG+FGQSRQ G
Sbjct: 1611 -VTPSQTPAQSGFGQPSQIGGGQQALGSVLGSFGQSRQIG 1649


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