BLASTX nr result

ID: Papaver23_contig00031450 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Papaver23_contig00031450
         (493 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002317780.1| predicted protein [Populus trichocarpa] gi|2...    59   3e-09
ref|XP_003526715.1| PREDICTED: pentatricopeptide repeat-containi...    60   4e-09
gb|ADN33740.1| pentatricopeptide repeat-containing protein [Cucu...    61   6e-09
ref|XP_004146221.1| PREDICTED: pentatricopeptide repeat-containi...    61   6e-09
ref|XP_003602247.1| Pentatricopeptide repeat-containing protein ...    62   7e-09

>ref|XP_002317780.1| predicted protein [Populus trichocarpa] gi|222858453|gb|EEE96000.1|
           predicted protein [Populus trichocarpa]
          Length = 590

 Score = 58.5 bits (140), Expect(2) = 3e-09
 Identities = 26/54 (48%), Positives = 39/54 (72%)
 Frame = +3

Query: 3   LIEAGKIDEAKLCFDQMVERLSPDVSCFESMLKTLCEAGKLDEVLKTIDGMLSD 164
           L++ GKIDEAK  +D MV++L  D   ++ M+KT+ + GKLDEVLK  +G++ D
Sbjct: 472 LVKVGKIDEAKSFYDMMVKKLKMDDESYKFMMKTMSDVGKLDEVLKMAEGIIDD 525



 Score = 27.3 bits (59), Expect(2) = 3e-09
 Identities = 12/25 (48%), Positives = 19/25 (76%)
 Frame = +2

Query: 179 SSEMKEYVFNKLGK*GREDELVQLI 253
           S E++E+V  +L K GRE+EL +L+
Sbjct: 531 SEELQEFVKGELRKDGREEELTKLL 555


>ref|XP_003526715.1| PREDICTED: pentatricopeptide repeat-containing protein
           At3g49240-like [Glycine max]
          Length = 632

 Score = 59.7 bits (143), Expect(2) = 4e-09
 Identities = 27/57 (47%), Positives = 42/57 (73%)
 Frame = +3

Query: 3   LIEAGKIDEAKLCFDQMVERLSPDVSCFESMLKTLCEAGKLDEVLKTIDGMLSDGGV 173
           L++ GKIDEAK  F+ MV++L  DV+ ++ M+K L + G+LDE+L+ +D +L D GV
Sbjct: 461 LVKVGKIDEAKGFFELMVKKLKMDVASYQFMMKVLSDEGRLDEMLQIVDTLLDDNGV 517



 Score = 25.8 bits (55), Expect(2) = 4e-09
 Identities = 12/23 (52%), Positives = 17/23 (73%)
 Frame = +2

Query: 185 EMKEYVFNKLGK*GREDELVQLI 253
           E +E+V  +L K GRE+EL +LI
Sbjct: 522 EFQEFVKGELRKEGREEELTKLI 544


>gb|ADN33740.1| pentatricopeptide repeat-containing protein [Cucumis melo subsp.
           melo]
          Length = 624

 Score = 61.2 bits (147), Expect(2) = 6e-09
 Identities = 27/57 (47%), Positives = 41/57 (71%)
 Frame = +3

Query: 3   LIEAGKIDEAKLCFDQMVERLSPDVSCFESMLKTLCEAGKLDEVLKTIDGMLSDGGV 173
           L++ GK+DEAK  FD MV++L  D S ++ ++K L E+GK+DEVL  +D +L D G+
Sbjct: 470 LVKLGKVDEAKSFFDLMVKKLKMDASNYQFIMKALSESGKMDEVLNVVDTLLDDDGI 526



 Score = 23.9 bits (50), Expect(2) = 6e-09
 Identities = 10/25 (40%), Positives = 18/25 (72%)
 Frame = +2

Query: 179 SSEMKEYVFNKLGK*GREDELVQLI 253
           S E++E+V  +L K  RE++L +L+
Sbjct: 529 SEELQEFVRGELRKEDREEDLAKLV 553


>ref|XP_004146221.1| PREDICTED: pentatricopeptide repeat-containing protein
           At3g49240-like [Cucumis sativus]
           gi|449511036|ref|XP_004163845.1| PREDICTED:
           pentatricopeptide repeat-containing protein
           At3g49240-like [Cucumis sativus]
          Length = 624

 Score = 60.8 bits (146), Expect(2) = 6e-09
 Identities = 26/57 (45%), Positives = 41/57 (71%)
 Frame = +3

Query: 3   LIEAGKIDEAKLCFDQMVERLSPDVSCFESMLKTLCEAGKLDEVLKTIDGMLSDGGV 173
           L++ GKID+AK  FD MV++L  D S ++ ++K L E+GK+DE+L  +D +L D G+
Sbjct: 470 LVKLGKIDDAKSFFDLMVKKLKMDASSYQFIMKALSESGKMDEILNVVDTLLDDDGI 526



 Score = 24.3 bits (51), Expect(2) = 6e-09
 Identities = 10/25 (40%), Positives = 18/25 (72%)
 Frame = +2

Query: 179 SSEMKEYVFNKLGK*GREDELVQLI 253
           S E++E+V  +L K  RE++L +L+
Sbjct: 529 SEELQEFVRGELRKENREEDLAKLV 553


>ref|XP_003602247.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
           gi|355491295|gb|AES72498.1| Pentatricopeptide
           repeat-containing protein [Medicago truncatula]
          Length = 704

 Score = 62.4 bits (150), Expect(2) = 7e-09
 Identities = 28/57 (49%), Positives = 43/57 (75%)
 Frame = +3

Query: 3   LIEAGKIDEAKLCFDQMVERLSPDVSCFESMLKTLCEAGKLDEVLKTIDGMLSDGGV 173
           L++ GKID+AK  FD MV++L  DV+ ++ M+K L EAG+LD+VL+ ++ +L D GV
Sbjct: 468 LVKVGKIDDAKFFFDLMVKKLKMDVASYQFMMKVLSEAGRLDDVLQIVNMLLDDNGV 524



 Score = 22.3 bits (46), Expect(2) = 7e-09
 Identities = 10/23 (43%), Positives = 17/23 (73%)
 Frame = +2

Query: 185 EMKEYVFNKLGK*GREDELVQLI 253
           E +E+V  +L K GRE++L +L+
Sbjct: 529 EFQEFVKVELRKEGREEDLAKLM 551


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