BLASTX nr result

ID: Papaver23_contig00031196 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Papaver23_contig00031196
         (714 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002270318.1| PREDICTED: gamma-tubulin complex component 4...   102   1e-29
ref|XP_002523094.1| gamma-tubulin complex component, putative [R...    91   3e-27
ref|XP_002320339.1| tubulin gamma complex-associated protein [Po...    95   2e-25
ref|XP_003536108.1| PREDICTED: gamma-tubulin complex component 4...    89   4e-23
ref|XP_003518990.1| PREDICTED: gamma-tubulin complex component 4...    89   2e-22

>ref|XP_002270318.1| PREDICTED: gamma-tubulin complex component 4 homolog [Vitis
           vinifera] gi|297743902|emb|CBI36872.3| unnamed protein
           product [Vitis vinifera]
          Length = 743

 Score =  102 bits (253), Expect(2) = 1e-29
 Identities = 49/68 (72%), Positives = 54/68 (79%), Gaps = 5/68 (7%)
 Frame = +1

Query: 397 HQVMYNQLASWMIYVIIQDQHGEFFIRRQEDME-----SPSENFGKSVQKSPDDASLTDW 561
           HQVMYNQLASWM+Y I+QDQHGEFFIRRQED +     SPS+   K  + S DDASLTDW
Sbjct: 206 HQVMYNQLASWMVYGILQDQHGEFFIRRQEDRDVEHEASPSDMVEKLARMSTDDASLTDW 265

Query: 562 HLGFHIFL 585
           HLGFHIFL
Sbjct: 266 HLGFHIFL 273



 Score = 53.9 bits (128), Expect(2) = 1e-29
 Identities = 22/43 (51%), Positives = 32/43 (74%)
 Frame = +3

Query: 585 ESILLSSKAVRVIRNPGPSFKCQDAISHQPVSRGPQKVQGFTG 713
           ESIL + KA+RV+RNP  +F+ QD ++HQ + +G  +VQG TG
Sbjct: 286 ESILFAGKAIRVLRNPSSAFRFQDTLNHQQIPKGSHRVQGLTG 328


>ref|XP_002523094.1| gamma-tubulin complex component, putative [Ricinus communis]
           gi|223537656|gb|EEF39279.1| gamma-tubulin complex
           component, putative [Ricinus communis]
          Length = 756

 Score = 90.9 bits (224), Expect(2) = 3e-27
 Identities = 44/68 (64%), Positives = 50/68 (73%), Gaps = 5/68 (7%)
 Frame = +1

Query: 397 HQVMYNQLASWMIYVIIQDQHGEFFIRRQEDME-----SPSENFGKSVQKSPDDASLTDW 561
           HQVMYNQLASWM+Y I+QDQHGEFFI RQED +     +  +   K  + S DD SLTDW
Sbjct: 207 HQVMYNQLASWMVYGILQDQHGEFFITRQEDRDLVNSSAQPDMSEKLARLSTDDISLTDW 266

Query: 562 HLGFHIFL 585
           HLGFHIFL
Sbjct: 267 HLGFHIFL 274



 Score = 57.0 bits (136), Expect(2) = 3e-27
 Identities = 22/43 (51%), Positives = 34/43 (79%)
 Frame = +3

Query: 585 ESILLSSKAVRVIRNPGPSFKCQDAISHQPVSRGPQKVQGFTG 713
           ES+L + KA+RV+RNP P+F+C+D++ +Q V +G Q +QGF G
Sbjct: 287 ESVLFAGKAIRVLRNPSPAFQCKDSLHNQQVPKGGQNIQGFVG 329


>ref|XP_002320339.1| tubulin gamma complex-associated protein [Populus trichocarpa]
           gi|222861112|gb|EEE98654.1| tubulin gamma
           complex-associated protein [Populus trichocarpa]
          Length = 728

 Score = 94.7 bits (234), Expect(2) = 2e-25
 Identities = 46/68 (67%), Positives = 52/68 (76%), Gaps = 5/68 (7%)
 Frame = +1

Query: 397 HQVMYNQLASWMIYVIIQDQHGEFFIRRQEDME-----SPSENFGKSVQKSPDDASLTDW 561
           HQVMYNQLASW++Y I+QDQHGEFFIRRQED +     S  +   K  + S DDASLTDW
Sbjct: 197 HQVMYNQLASWVVYGILQDQHGEFFIRRQEDRDVEHGSSNQDMSEKLARLSTDDASLTDW 256

Query: 562 HLGFHIFL 585
           HLGFHIFL
Sbjct: 257 HLGFHIFL 264



 Score = 47.4 bits (111), Expect(2) = 2e-25
 Identities = 21/43 (48%), Positives = 31/43 (72%)
 Frame = +3

Query: 585 ESILLSSKAVRVIRNPGPSFKCQDAISHQPVSRGPQKVQGFTG 713
           ESIL + KA+RV+RNP P+F+ +D + +Q + +G QK Q  TG
Sbjct: 277 ESILFAGKAIRVLRNPSPAFQFKDPVYNQQIPKGAQKNQVSTG 319


>ref|XP_003536108.1| PREDICTED: gamma-tubulin complex component 4 homolog [Glycine max]
          Length = 732

 Score = 89.0 bits (219), Expect(2) = 4e-23
 Identities = 44/68 (64%), Positives = 51/68 (75%), Gaps = 5/68 (7%)
 Frame = +1

Query: 397 HQVMYNQLASWMIYVIIQDQHGEFFIRRQEDME-----SPSENFGKSVQKSPDDASLTDW 561
           HQVMYNQLASW++Y I+QDQ+GEFFIRRQED +     S  +   K  + S DDASLTDW
Sbjct: 191 HQVMYNQLASWIVYGILQDQYGEFFIRRQEDRDVENSSSHPDISEKLARMSTDDASLTDW 250

Query: 562 HLGFHIFL 585
           HLGFHI L
Sbjct: 251 HLGFHISL 258



 Score = 45.1 bits (105), Expect(2) = 4e-23
 Identities = 22/43 (51%), Positives = 29/43 (67%)
 Frame = +3

Query: 585 ESILLSSKAVRVIRNPGPSFKCQDAISHQPVSRGPQKVQGFTG 713
           ESIL + KAVRV+RNP PSF+  DA+ H  + +  QK+ G  G
Sbjct: 271 ESILFAGKAVRVLRNPSPSFQSGDAV-HPQMPKSFQKIHGLAG 312


>ref|XP_003518990.1| PREDICTED: gamma-tubulin complex component 4 homolog [Glycine max]
          Length = 733

 Score = 88.6 bits (218), Expect(2) = 2e-22
 Identities = 42/68 (61%), Positives = 51/68 (75%), Gaps = 5/68 (7%)
 Frame = +1

Query: 397 HQVMYNQLASWMIYVIIQDQHGEFFIRRQEDMESPSENFGKSVQK-----SPDDASLTDW 561
           HQVMYNQLASW++Y I+QDQ+GEFFIRRQED +  + +    + +     S DDASLTDW
Sbjct: 191 HQVMYNQLASWIVYGILQDQYGEFFIRRQEDRDVENSSSHPDISEKLACMSTDDASLTDW 250

Query: 562 HLGFHIFL 585
           HLGFHI L
Sbjct: 251 HLGFHISL 258



 Score = 43.5 bits (101), Expect(2) = 2e-22
 Identities = 21/43 (48%), Positives = 29/43 (67%)
 Frame = +3

Query: 585 ESILLSSKAVRVIRNPGPSFKCQDAISHQPVSRGPQKVQGFTG 713
           ESIL + KAV+V+RNP PSF+  DA+ H  + +  QK+ G  G
Sbjct: 271 ESILFAGKAVQVLRNPSPSFQSGDAV-HPQMPKSFQKIHGLAG 312


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