BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Papaver23_contig00031060
         (464 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002271258.1| PREDICTED: exosome complex component rrp4-li...   113   2e-23
ref|XP_002889455.1| ATRRP4 [Arabidopsis lyrata subsp. lyrata] gi...   101   5e-20
ref|NP_171835.1| exosome complex component RRP4 [Arabidopsis tha...   101   5e-20
emb|CBI32318.3| unnamed protein product [Vitis vinifera]               99   4e-19
ref|XP_003609733.1| Exosome complex exonuclease RRP4 [Medicago t...    97   1e-18

>ref|XP_002271258.1| PREDICTED: exosome complex component rrp4-like [Vitis vinifera]
          Length = 330

 Score =  113 bits (282), Expect = 2e-23
 Identities = 58/102 (56%), Positives = 75/102 (73%)
 Frame = -2

Query: 463 VWVGEHVEVRDDMITDDQENKPELQQTSKFNIKSMSLGEQEQTYTPPETRQNICRIANAI 284
           +WVGEHVE +  +I +DQ +K E   T   +   MSL EQE+TYT  ETRQNICRIANA+
Sbjct: 215 IWVGEHVEAKGILI-EDQTDKAEQLNTKSSSSTFMSLEEQERTYTSLETRQNICRIANAV 273

Query: 283 RVLTSLGITLTVDVIIATVEMSKALYFDVHEMVGAEFYVQVA 158
           RVL +LG ++TV+VI  TV +S +L  D+HEM+G+EFYV VA
Sbjct: 274 RVLANLGFSVTVEVIKETVNLSSSLNLDIHEMLGSEFYVLVA 315


>ref|XP_002889455.1| ATRRP4 [Arabidopsis lyrata subsp. lyrata]
           gi|297335297|gb|EFH65714.1| ATRRP4 [Arabidopsis lyrata
           subsp. lyrata]
          Length = 322

 Score =  101 bits (252), Expect = 5e-20
 Identities = 53/102 (51%), Positives = 71/102 (69%)
 Frame = -2

Query: 463 VWVGEHVEVRDDMITDDQENKPELQQTSKFNIKSMSLGEQEQTYTPPETRQNICRIANAI 284
           +WVGEHVEVRD M  DDQ+++          I S S G+ EQ + PPETRQ ICRI N I
Sbjct: 217 IWVGEHVEVRDPMAIDDQKDEEM--------ISSSSTGK-EQNHIPPETRQTICRIGNVI 267

Query: 283 RVLTSLGITLTVDVIIATVEMSKALYFDVHEMVGAEFYVQVA 158
           RVL++LG T+T++VII TV +S +   D+ +M+G+EF+V VA
Sbjct: 268 RVLSNLGFTVTLEVIIETVNLSNSKNIDIQDMLGSEFHVVVA 309


>ref|NP_171835.1| exosome complex component RRP4 [Arabidopsis thaliana]
           gi|3850568|gb|AAC72108.1| Similar to hypothetical
           protein SPAC2F7.14c gi|1052797 from Schizosaccharomyces
           pombe cosmid gb|Z50142 [Arabidopsis thaliana]
           gi|34365689|gb|AAQ65156.1| At1g03360 [Arabidopsis
           thaliana] gi|51970606|dbj|BAD43995.1| hypothetical
           protein [Arabidopsis thaliana]
           gi|332189442|gb|AEE27563.1| exosome complex component
           RRP4 [Arabidopsis thaliana]
          Length = 322

 Score =  101 bits (252), Expect = 5e-20
 Identities = 53/102 (51%), Positives = 73/102 (71%)
 Frame = -2

Query: 463 VWVGEHVEVRDDMITDDQENKPELQQTSKFNIKSMSLGEQEQTYTPPETRQNICRIANAI 284
           +WVGEHVEVRD M  DDQ+++          I S S G+ EQ++ P ETRQ ICRI NAI
Sbjct: 217 IWVGEHVEVRDPMAIDDQKDEEM--------ISSSSTGK-EQSHIPLETRQTICRIGNAI 267

Query: 283 RVLTSLGITLTVDVIIATVEMSKALYFDVHEMVGAEFYVQVA 158
           RVL++LG T+T++VI+ TV +S +   D+H+M+G+EF+V VA
Sbjct: 268 RVLSNLGFTVTLEVIMETVNLSNSKNIDIHDMLGSEFHVVVA 309


>emb|CBI32318.3| unnamed protein product [Vitis vinifera]
          Length = 320

 Score = 99.0 bits (245), Expect = 4e-19
 Identities = 54/102 (52%), Positives = 72/102 (70%)
 Frame = -2

Query: 463 VWVGEHVEVRDDMITDDQENKPELQQTSKFNIKSMSLGEQEQTYTPPETRQNICRIANAI 284
           +WVGEHVE +  +I +DQ +K E     + N KS      ++TYT  ETRQNICRIANA+
Sbjct: 215 IWVGEHVEAKGILI-EDQTDKAE-----QLNTKS-----SKRTYTSLETRQNICRIANAV 263

Query: 283 RVLTSLGITLTVDVIIATVEMSKALYFDVHEMVGAEFYVQVA 158
           RVL +LG ++TV+VI  TV +S +L  D+HEM+G+EFYV VA
Sbjct: 264 RVLANLGFSVTVEVIKETVNLSSSLNLDIHEMLGSEFYVLVA 305


>ref|XP_003609733.1| Exosome complex exonuclease RRP4 [Medicago truncatula]
           gi|217074186|gb|ACJ85453.1| unknown [Medicago
           truncatula] gi|355510788|gb|AES91930.1| Exosome complex
           exonuclease RRP4 [Medicago truncatula]
           gi|388516977|gb|AFK46550.1| unknown [Medicago
           truncatula]
          Length = 327

 Score = 97.1 bits (240), Expect = 1e-18
 Identities = 50/102 (49%), Positives = 73/102 (71%)
 Frame = -2

Query: 463 VWVGEHVEVRDDMITDDQENKPELQQTSKFNIKSMSLGEQEQTYTPPETRQNICRIANAI 284
           +WVGEHVEVRDDM+ +DQ N+ + Q  +  N  S+SL EQE+ YT  ETR+ ICR ANA+
Sbjct: 214 IWVGEHVEVRDDMV-EDQVNQSDPQVLTP-NKNSVSLEEQEKKYTALETRKYICRAANAV 271

Query: 283 RVLTSLGITLTVDVIIATVEMSKALYFDVHEMVGAEFYVQVA 158
           R L++LG  +T ++I   +++S +   D+H+M+G+EF V VA
Sbjct: 272 RGLSTLGFIITSEIIKGVIDLSLSANLDIHDMLGSEFCVLVA 313