BLASTX nr result

ID: Papaver23_contig00030480 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Papaver23_contig00030480
         (485 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_003621561.1| F-box protein [Medicago truncatula] gi|87241...    67   2e-09
ref|XP_003621564.1| F-box protein [Medicago truncatula] gi|12436...    67   2e-09
ref|XP_002297705.1| predicted protein [Populus trichocarpa] gi|2...    62   6e-08
ref|XP_003621555.1| F-box protein [Medicago truncatula] gi|35549...    61   8e-08
gb|ABD33336.2| Cyclin-like F-box; F-box protein interaction doma...    61   8e-08

>ref|XP_003621561.1| F-box protein [Medicago truncatula] gi|87241468|gb|ABD33326.1|
           Cyclin-like F-box; F-box protein interaction domain
           [Medicago truncatula] gi|124361053|gb|ABN09025.1|
           Cyclin-like F-box; F-box protein interaction domain
           [Medicago truncatula] gi|355496576|gb|AES77779.1| F-box
           protein [Medicago truncatula]
          Length = 398

 Score = 66.6 bits (161), Expect = 2e-09
 Identities = 35/113 (30%), Positives = 61/113 (53%), Gaps = 7/113 (6%)
 Frame = -3

Query: 474 TLYGFCYSPVLDDYKIVRADMIYVASDW-------ICYGCEVEVYSLRSNSWKKIPYDIP 316
           T +GF Y  + D+YK++R  M    SD        + Y    E+YSLRSNSW+++  D+P
Sbjct: 171 TRHGFGYVSIADEYKLIRQVMYNPKSDTDDSSLEDVSYDLFWEIYSLRSNSWRELHSDVP 230

Query: 315 YDFFLGGKAIKPVSYNGALQWLGSSSVSLKEGWELSITESIVIISFDIETDSF 157
           YD+   G     +  +G   WLG      ++G+++   + + ++SFD+  ++F
Sbjct: 231 YDYREDG-----ICLDGMCHWLG------EDGYDIDRVDEVYLLSFDLSKEAF 272


>ref|XP_003621564.1| F-box protein [Medicago truncatula] gi|124361057|gb|ABN09029.1|
           Cyclin-like F-box; F-box protein interaction domain
           [Medicago truncatula] gi|355496579|gb|AES77782.1| F-box
           protein [Medicago truncatula]
          Length = 410

 Score = 66.6 bits (161), Expect = 2e-09
 Identities = 35/113 (30%), Positives = 61/113 (53%), Gaps = 7/113 (6%)
 Frame = -3

Query: 474 TLYGFCYSPVLDDYKIVRADMIYVASDW-------ICYGCEVEVYSLRSNSWKKIPYDIP 316
           T +GF Y  + D+YK++R  M    SD        + Y    E+YSLRSNSW+++  D+P
Sbjct: 171 TRHGFGYVSIADEYKLIRQVMYNPKSDTDDSSLEDVSYDLFWEIYSLRSNSWRELHSDVP 230

Query: 315 YDFFLGGKAIKPVSYNGALQWLGSSSVSLKEGWELSITESIVIISFDIETDSF 157
           YD+   G     +  +G   WLG      ++G+++   + + ++SFD+  ++F
Sbjct: 231 YDYREDG-----ICLDGMCHWLG------EDGYDIDRVDEVYLLSFDLSKEAF 272


>ref|XP_002297705.1| predicted protein [Populus trichocarpa] gi|222844963|gb|EEE82510.1|
           predicted protein [Populus trichocarpa]
          Length = 408

 Score = 61.6 bits (148), Expect = 6e-08
 Identities = 41/112 (36%), Positives = 59/112 (52%), Gaps = 7/112 (6%)
 Frame = -3

Query: 468 YGFCYSPVLDDYKIVRADMIYVASDWICYGCEVEVYSLRSNSWKKI---PYD----IPYD 310
           YGF + P+ +DYK+VR    Y  S    + CEV+VYSL+SNSWK+I   PYD    +P D
Sbjct: 146 YGFGHDPINEDYKVVRFIHFYGDSPDGFFHCEVKVYSLKSNSWKRIDDYPYDLRFILPPD 205

Query: 309 FFLGGKAIKPVSYNGALQWLGSSSVSLKEGWELSITESIVIISFDIETDSFK 154
           +    +    V  N A+ W  +     KE        S +I++FD+  + FK
Sbjct: 206 YHPRCRRGYGVFANSAVHWKATVVGKGKE------NGSDLIVAFDLGAEEFK 251


>ref|XP_003621555.1| F-box protein [Medicago truncatula] gi|355496570|gb|AES77773.1|
           F-box protein [Medicago truncatula]
          Length = 399

 Score = 61.2 bits (147), Expect = 8e-08
 Identities = 40/111 (36%), Positives = 54/111 (48%), Gaps = 7/111 (6%)
 Frame = -3

Query: 468 YGFCYSPVLDDYKIVRADMIYVASDWICYGCEV-------EVYSLRSNSWKKIPYDIPYD 310
           +GF Y  V +DYKI+R  M Y   D   Y  E        E+YSLRSNSW+K+ YDIP +
Sbjct: 168 HGFGYDCVTNDYKIIRQVMCYHKIDIDVYLLEDIDNDHFWEIYSLRSNSWRKLEYDIPIN 227

Query: 309 FFLGGKAIKPVSYNGALQWLGSSSVSLKEGWELSITESIVIISFDIETDSF 157
               G     V  +G + W   S     E  E    +   ++SFD+ T+ F
Sbjct: 228 HKESG-----VCLDGMVHWWNQSDDIGDEDDEDDDDDEAYLLSFDLRTEEF 273


>gb|ABD33336.2| Cyclin-like F-box; F-box protein interaction domain; Galactose
           oxidase, central [Medicago truncatula]
          Length = 401

 Score = 61.2 bits (147), Expect = 8e-08
 Identities = 40/111 (36%), Positives = 54/111 (48%), Gaps = 7/111 (6%)
 Frame = -3

Query: 468 YGFCYSPVLDDYKIVRADMIYVASDWICYGCEV-------EVYSLRSNSWKKIPYDIPYD 310
           +GF Y  V +DYKI+R  M Y   D   Y  E        E+YSLRSNSW+K+ YDIP +
Sbjct: 170 HGFGYDCVTNDYKIIRQVMCYHKIDIDVYLLEDIDNDHFWEIYSLRSNSWRKLEYDIPIN 229

Query: 309 FFLGGKAIKPVSYNGALQWLGSSSVSLKEGWELSITESIVIISFDIETDSF 157
               G     V  +G + W   S     E  E    +   ++SFD+ T+ F
Sbjct: 230 HKESG-----VCLDGMVHWWNQSDDIGDEDDEDDDDDEAYLLSFDLRTEEF 275


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