BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Papaver23_contig00030472
         (610 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

emb|CBI24961.3| unnamed protein product [Vitis vinifera]              192   5e-47
ref|XP_002272444.1| PREDICTED: RNA polymerase sigma factor rpoD-...   192   5e-47
ref|XP_002517769.1| RNA polymerase sigma factor rpoD, putative [...   164   9e-39
ref|XP_004169825.1| PREDICTED: RNA polymerase sigma factor sigD,...   156   3e-36
ref|XP_004149725.1| PREDICTED: RNA polymerase sigma factor sigD,...   156   3e-36

>emb|CBI24961.3| unnamed protein product [Vitis vinifera]
          Length = 319

 Score =  192 bits (487), Expect = 5e-47
 Identities = 97/139 (69%), Positives = 116/139 (83%)
 Frame = +2

Query: 194 LTAKEEAEFSMDLKEGARLEAARNKLCADTRKEEPTISEWAEAVGMKRSSLERAILRISQ 373
           LT +EEAEF + LKE A LEAAR ++ A+TR+ EPT ++WAEAVG+KRSSL++ +    +
Sbjct: 23  LTPREEAEFCLCLKEEAGLEAARRRI-AETREHEPTSNQWAEAVGIKRSSLDKMLCNGRE 81

Query: 374 SRNRITLSYRRLVVSIATAYQGRGLSLQDLVQEGSIGLLRGAERFDPGKGFKLSTYVYWW 553
           SR RI  SYRRLVVSIA  YQG+GLSLQDL+QEGSIGLLRGAERFDP +G+KLSTYVYWW
Sbjct: 82  SRERINQSYRRLVVSIAARYQGKGLSLQDLIQEGSIGLLRGAERFDPDRGYKLSTYVYWW 141

Query: 554 IKQAIIRAIEQKSRTIRLP 610
           I+QAI+RAI  KSR IRLP
Sbjct: 142 IRQAIVRAIANKSRIIRLP 160


>ref|XP_002272444.1| PREDICTED: RNA polymerase sigma factor rpoD-like [Vitis vinifera]
          Length = 426

 Score =  192 bits (487), Expect = 5e-47
 Identities = 97/139 (69%), Positives = 116/139 (83%)
 Frame = +2

Query: 194 LTAKEEAEFSMDLKEGARLEAARNKLCADTRKEEPTISEWAEAVGMKRSSLERAILRISQ 373
           LT +EEAEF + LKE A LEAAR ++ A+TR+ EPT ++WAEAVG+KRSSL++ +    +
Sbjct: 130 LTPREEAEFCLCLKEEAGLEAARRRI-AETREHEPTSNQWAEAVGIKRSSLDKMLCNGRE 188

Query: 374 SRNRITLSYRRLVVSIATAYQGRGLSLQDLVQEGSIGLLRGAERFDPGKGFKLSTYVYWW 553
           SR RI  SYRRLVVSIA  YQG+GLSLQDL+QEGSIGLLRGAERFDP +G+KLSTYVYWW
Sbjct: 189 SRERINQSYRRLVVSIAARYQGKGLSLQDLIQEGSIGLLRGAERFDPDRGYKLSTYVYWW 248

Query: 554 IKQAIIRAIEQKSRTIRLP 610
           I+QAI+RAI  KSR IRLP
Sbjct: 249 IRQAIVRAIANKSRIIRLP 267


>ref|XP_002517769.1| RNA polymerase sigma factor rpoD, putative [Ricinus communis]
           gi|223543041|gb|EEF44576.1| RNA polymerase sigma factor
           rpoD, putative [Ricinus communis]
          Length = 389

 Score =  164 bits (416), Expect = 9e-39
 Identities = 83/140 (59%), Positives = 112/140 (80%)
 Frame = +2

Query: 191 YLTAKEEAEFSMDLKEGARLEAARNKLCADTRKEEPTISEWAEAVGMKRSSLERAILRIS 370
           YL++ EEAEF + LK+ AR+EAAR ++ A+T++ EPT  + AEA+ M++ ++++ + +  
Sbjct: 116 YLSSIEEAEFCLCLKDHARVEAARRRI-AETQEHEPTSKQLAEALRMRKKNVDKILCKGR 174

Query: 371 QSRNRITLSYRRLVVSIATAYQGRGLSLQDLVQEGSIGLLRGAERFDPGKGFKLSTYVYW 550
           QSR RIT +YRRLV+SIA  Y+G+GLSLQDL+QEGSIGLLRGAERFDP +G KLSTYVYW
Sbjct: 175 QSRERITGNYRRLVLSIANRYRGKGLSLQDLIQEGSIGLLRGAERFDPKRGNKLSTYVYW 234

Query: 551 WIKQAIIRAIEQKSRTIRLP 610
           WIK+AII +I   SR +R P
Sbjct: 235 WIKEAIITSISINSRIVRQP 254


>ref|XP_004169825.1| PREDICTED: RNA polymerase sigma factor sigD, chloroplastic-like
           [Cucumis sativus]
          Length = 341

 Score =  156 bits (394), Expect = 3e-36
 Identities = 76/140 (54%), Positives = 104/140 (74%)
 Frame = +2

Query: 191 YLTAKEEAEFSMDLKEGARLEAARNKLCADTRKEEPTISEWAEAVGMKRSSLERAILRIS 370
           YL+ KEEAE  + LKE   LE  + ++  +T++ EPT  + A A+G K   ++R + R  
Sbjct: 44  YLSPKEEAELCLCLKEAVLLENVKTRIM-ETQEHEPTNKQLAIAMGTKSGCIDRILCRAR 102

Query: 371 QSRNRITLSYRRLVVSIATAYQGRGLSLQDLVQEGSIGLLRGAERFDPGKGFKLSTYVYW 550
           +SR+R+   Y +LV+SIA  YQG+GLSLQDL QEG+IGLL+GAERF+P +G KLSTY YW
Sbjct: 103 ESRDRLIRCYSKLVISIAAPYQGKGLSLQDLTQEGNIGLLKGAERFEPNRGHKLSTYAYW 162

Query: 551 WIKQAIIRAIEQKSRTIRLP 610
           WI+QAIIRA+++KSR +RLP
Sbjct: 163 WIRQAIIRALDKKSRLVRLP 182


>ref|XP_004149725.1| PREDICTED: RNA polymerase sigma factor sigD, chloroplastic-like
           [Cucumis sativus]
          Length = 436

 Score =  156 bits (394), Expect = 3e-36
 Identities = 76/140 (54%), Positives = 104/140 (74%)
 Frame = +2

Query: 191 YLTAKEEAEFSMDLKEGARLEAARNKLCADTRKEEPTISEWAEAVGMKRSSLERAILRIS 370
           YL+ KEEAE  + LKE   LE  + ++  +T++ EPT  + A A+G K   ++R + R  
Sbjct: 139 YLSPKEEAELCLCLKEAVLLENVKTRIM-ETQEHEPTNKQLAIAMGTKSGCIDRILCRAR 197

Query: 371 QSRNRITLSYRRLVVSIATAYQGRGLSLQDLVQEGSIGLLRGAERFDPGKGFKLSTYVYW 550
           +SR+R+   Y +LV+SIA  YQG+GLSLQDL QEG+IGLL+GAERF+P +G KLSTY YW
Sbjct: 198 ESRDRLIRCYSKLVISIAAPYQGKGLSLQDLTQEGNIGLLKGAERFEPNRGHKLSTYAYW 257

Query: 551 WIKQAIIRAIEQKSRTIRLP 610
           WI+QAIIRA+++KSR +RLP
Sbjct: 258 WIRQAIIRALDKKSRLVRLP 277