BLASTX nr result

ID: Papaver23_contig00030414 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Papaver23_contig00030414
         (554 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002263835.2| PREDICTED: DNA-directed RNA polymerase I sub...   305   2e-81
emb|CBI35100.3| unnamed protein product [Vitis vinifera]              305   2e-81
ref|XP_002529996.1| DNA-directed RNA polymerase I subunit, putat...   294   6e-78
ref|XP_004163996.1| PREDICTED: probable DNA-directed RNA polymer...   287   9e-76
ref|XP_004146776.1| PREDICTED: DNA-directed RNA polymerase I sub...   287   9e-76

>ref|XP_002263835.2| PREDICTED: DNA-directed RNA polymerase I subunit RPA2 [Vitis
            vinifera]
          Length = 1142

 Score =  305 bits (782), Expect = 2e-81
 Identities = 146/184 (79%), Positives = 162/184 (88%)
 Frame = -1

Query: 554  PVHTPDGEPCGLLNHLTSTCRITSYFDSNGTVKDFLKIRKSIVSVLTGIGMIPSLPKLVR 375
            PVHTPDGEPCGLLNH+ STCRITSYFDS G  +DF KIR SI+SVL GIGM P+LPKLV+
Sbjct: 464  PVHTPDGEPCGLLNHMASTCRITSYFDSRGNTRDFFKIRMSILSVLIGIGMTPALPKLVQ 523

Query: 374  AGPPEVVFVLLDGCVVGSISSNIVEKAVEHIRRLKLSPYSGIPDDLEIGYVPLTMGGAYP 195
            AGPPEV+ V+LDG VVGSI S+ VE AV H+RRLK+S  S IPDDLE+GY+PL+MGGAYP
Sbjct: 524  AGPPEVLSVILDGRVVGSIPSSEVETAVNHLRRLKVSAISVIPDDLEVGYIPLSMGGAYP 583

Query: 194  GLYLFTSPSRFVRPVRNISIPSEENQNIELIGPFEQVYMEIRCADGGEGGRKNNFPATHE 15
            GLYLFTSPSRFVRPVRNISIPSEE  +IELIGPFEQVYMEIRC DG +GGR+N FPATHE
Sbjct: 584  GLYLFTSPSRFVRPVRNISIPSEEGHDIELIGPFEQVYMEIRCPDGSDGGRRNIFPATHE 643

Query: 14   EIHP 3
            EIHP
Sbjct: 644  EIHP 647


>emb|CBI35100.3| unnamed protein product [Vitis vinifera]
          Length = 1113

 Score =  305 bits (782), Expect = 2e-81
 Identities = 146/184 (79%), Positives = 162/184 (88%)
 Frame = -1

Query: 554  PVHTPDGEPCGLLNHLTSTCRITSYFDSNGTVKDFLKIRKSIVSVLTGIGMIPSLPKLVR 375
            PVHTPDGEPCGLLNH+ STCRITSYFDS G  +DF KIR SI+SVL GIGM P+LPKLV+
Sbjct: 457  PVHTPDGEPCGLLNHMASTCRITSYFDSRGNTRDFFKIRMSILSVLIGIGMTPALPKLVQ 516

Query: 374  AGPPEVVFVLLDGCVVGSISSNIVEKAVEHIRRLKLSPYSGIPDDLEIGYVPLTMGGAYP 195
            AGPPEV+ V+LDG VVGSI S+ VE AV H+RRLK+S  S IPDDLE+GY+PL+MGGAYP
Sbjct: 517  AGPPEVLSVILDGRVVGSIPSSEVETAVNHLRRLKVSAISVIPDDLEVGYIPLSMGGAYP 576

Query: 194  GLYLFTSPSRFVRPVRNISIPSEENQNIELIGPFEQVYMEIRCADGGEGGRKNNFPATHE 15
            GLYLFTSPSRFVRPVRNISIPSEE  +IELIGPFEQVYMEIRC DG +GGR+N FPATHE
Sbjct: 577  GLYLFTSPSRFVRPVRNISIPSEEGHDIELIGPFEQVYMEIRCPDGSDGGRRNIFPATHE 636

Query: 14   EIHP 3
            EIHP
Sbjct: 637  EIHP 640


>ref|XP_002529996.1| DNA-directed RNA polymerase I subunit, putative [Ricinus communis]
            gi|223530519|gb|EEF32401.1| DNA-directed RNA polymerase I
            subunit, putative [Ricinus communis]
          Length = 1159

 Score =  294 bits (753), Expect = 6e-78
 Identities = 140/184 (76%), Positives = 160/184 (86%)
 Frame = -1

Query: 554  PVHTPDGEPCGLLNHLTSTCRITSYFDSNGTVKDFLKIRKSIVSVLTGIGMIPSLPKLVR 375
            PVHTPDGEPCGLLNH+T +CRITSYFDS G VKDF  IRKSI+ VLT +GM  SLPKLV+
Sbjct: 480  PVHTPDGEPCGLLNHMTRSCRITSYFDSQGAVKDFFDIRKSILGVLTSLGMTSSLPKLVQ 539

Query: 374  AGPPEVVFVLLDGCVVGSISSNIVEKAVEHIRRLKLSPYSGIPDDLEIGYVPLTMGGAYP 195
            AGPP+V+ VLLDG VVGSI S+ VEK V H+RRLK++  S IPDDLE+GYVPL+MGGA+P
Sbjct: 540  AGPPQVLSVLLDGRVVGSIPSSQVEKVVVHLRRLKVAASSVIPDDLEVGYVPLSMGGAFP 599

Query: 194  GLYLFTSPSRFVRPVRNISIPSEENQNIELIGPFEQVYMEIRCADGGEGGRKNNFPATHE 15
            GLYLFTSPSRF+RPV+NISIP+ E +NIELIGPFEQV+MEIRC DGG GGR + FPATHE
Sbjct: 600  GLYLFTSPSRFIRPVKNISIPAGEGENIELIGPFEQVFMEIRCPDGGNGGRSDAFPATHE 659

Query: 14   EIHP 3
            EIHP
Sbjct: 660  EIHP 663


>ref|XP_004163996.1| PREDICTED: probable DNA-directed RNA polymerase I subunit RPA2-like,
            partial [Cucumis sativus]
          Length = 948

 Score =  287 bits (734), Expect = 9e-76
 Identities = 138/184 (75%), Positives = 158/184 (85%)
 Frame = -1

Query: 554  PVHTPDGEPCGLLNHLTSTCRITSYFDSNGTVKDFLKIRKSIVSVLTGIGMIPSLPKLVR 375
            PVHTPDGEPCGLLNHLTSTCRITS+F+S G V+DF KIR SI+SVL  +GMIPSLPKLV+
Sbjct: 495  PVHTPDGEPCGLLNHLTSTCRITSHFNSQGKVRDFYKIRTSILSVLIAVGMIPSLPKLVQ 554

Query: 374  AGPPEVVFVLLDGCVVGSISSNIVEKAVEHIRRLKLSPYSGIPDDLEIGYVPLTMGGAYP 195
             G P+ + VLLDG +VG ISSN VEK V H+RRLK+     IPDDLE+GYVPL++ GAYP
Sbjct: 555  MGLPDFLNVLLDGRIVGYISSNEVEKIVAHLRRLKVLSPHVIPDDLEVGYVPLSISGAYP 614

Query: 194  GLYLFTSPSRFVRPVRNISIPSEENQNIELIGPFEQVYMEIRCADGGEGGRKNNFPATHE 15
            GLYLFTSPSRFVRPV+N+SI  E+N NIELIGPFEQV+MEIRC DGG+GGRK+ FPATHE
Sbjct: 615  GLYLFTSPSRFVRPVKNLSISPEDNHNIELIGPFEQVFMEIRCPDGGDGGRKDEFPATHE 674

Query: 14   EIHP 3
            EIHP
Sbjct: 675  EIHP 678


>ref|XP_004146776.1| PREDICTED: DNA-directed RNA polymerase I subunit RPA2-like [Cucumis
            sativus]
          Length = 1173

 Score =  287 bits (734), Expect = 9e-76
 Identities = 138/184 (75%), Positives = 158/184 (85%)
 Frame = -1

Query: 554  PVHTPDGEPCGLLNHLTSTCRITSYFDSNGTVKDFLKIRKSIVSVLTGIGMIPSLPKLVR 375
            PVHTPDGEPCGLLNHLTSTCRITS+F+S G V+DF KIR SI+SVL  +GMIPSLPKLV+
Sbjct: 495  PVHTPDGEPCGLLNHLTSTCRITSHFNSQGKVRDFYKIRTSILSVLIAVGMIPSLPKLVQ 554

Query: 374  AGPPEVVFVLLDGCVVGSISSNIVEKAVEHIRRLKLSPYSGIPDDLEIGYVPLTMGGAYP 195
             G P+ + VLLDG +VG ISSN VEK V H+RRLK+     IPDDLE+GYVPL++ GAYP
Sbjct: 555  MGLPDFLNVLLDGRIVGYISSNEVEKIVAHLRRLKVLSPHVIPDDLEVGYVPLSISGAYP 614

Query: 194  GLYLFTSPSRFVRPVRNISIPSEENQNIELIGPFEQVYMEIRCADGGEGGRKNNFPATHE 15
            GLYLFTSPSRFVRPV+N+SI  E+N NIELIGPFEQV+MEIRC DGG+GGRK+ FPATHE
Sbjct: 615  GLYLFTSPSRFVRPVKNLSISPEDNHNIELIGPFEQVFMEIRCPDGGDGGRKDEFPATHE 674

Query: 14   EIHP 3
            EIHP
Sbjct: 675  EIHP 678


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