BLASTX nr result

ID: Papaver23_contig00030382 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Papaver23_contig00030382
         (887 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

emb|CAB39638.1| RNA-directed DNA polymerase-like protein [Arabid...    84   4e-14
gb|EEC71228.1| hypothetical protein OsI_03168 [Oryza sativa Indi...    81   3e-13
gb|EEE55133.1| hypothetical protein OsJ_02920 [Oryza sativa Japo...    80   8e-13
gb|AAB82639.1| putative non-LTR retroelement reverse transcripta...    80   8e-13
ref|XP_002454941.1| hypothetical protein SORBIDRAFT_03g001780 [S...    79   2e-12

>emb|CAB39638.1| RNA-directed DNA polymerase-like protein [Arabidopsis thaliana]
           gi|7267666|emb|CAB78094.1| RNA-directed DNA
           polymerase-like protein [Arabidopsis thaliana]
          Length = 1274

 Score = 84.0 bits (206), Expect = 4e-14
 Identities = 42/89 (47%), Positives = 55/89 (61%)
 Frame = +1

Query: 616 RWIRTLCYLVRLF*RIFLAESGSQGKHFIPTREIRQGDPLSPYLFILCMEALSRYLLLAQ 795
           +WIR +   V      FL     QG   +P+R +RQGDPLSPYLFILC E LS     AQ
Sbjct: 542 KWIRWVMQCVCTVSYSFLINGSPQGS-VVPSRGLRQGDPLSPYLFILCTEVLSGLCRKAQ 600

Query: 796 KKGLIHGIKITKNGPPINHLMFLDDCMIF 882
           +KG++ GI++ +  P +NHL+F DD M F
Sbjct: 601 EKGVMVGIRVARGSPQVNHLLFADDTMFF 629


>gb|EEC71228.1| hypothetical protein OsI_03168 [Oryza sativa Indica Group]
          Length = 995

 Score = 81.3 bits (199), Expect = 3e-13
 Identities = 40/91 (43%), Positives = 58/91 (63%)
 Frame = +1

Query: 610 ILRWIRTLCYLVRLF*RIFLAESGSQGKHFIPTREIRQGDPLSPYLFILCMEALSRYLLL 789
           ++R + ++ Y VR+        +G   +  IP+R IRQGDP+SPYLF+LC+E LS  L  
Sbjct: 345 VMRCVTSVRYAVRI--------NGELTRPVIPSRGIRQGDPVSPYLFLLCIEGLSYLLQR 396

Query: 790 AQKKGLIHGIKITKNGPPINHLMFLDDCMIF 882
            +  GL+HGI+    GPPI+HL+F DD + F
Sbjct: 397 KESLGLLHGIRNGHQGPPISHLLFADDSIFF 427


>gb|EEE55133.1| hypothetical protein OsJ_02920 [Oryza sativa Japonica Group]
          Length = 1049

 Score = 79.7 bits (195), Expect = 8e-13
 Identities = 40/91 (43%), Positives = 57/91 (62%)
 Frame = +1

Query: 610 ILRWIRTLCYLVRLF*RIFLAESGSQGKHFIPTREIRQGDPLSPYLFILCMEALSRYLLL 789
           ++R + ++ Y VR+        +G   +  IP+R IRQGDP+SPYLF+LC E LS  L  
Sbjct: 345 VMRCVTSVRYAVRI--------NGELTRLVIPSRGIRQGDPVSPYLFLLCTEGLSCLLQR 396

Query: 790 AQKKGLIHGIKITKNGPPINHLMFLDDCMIF 882
            +  GL+HGI+    GPPI+HL+F DD + F
Sbjct: 397 KESLGLLHGIRNGHQGPPISHLLFADDSIFF 427


>gb|AAB82639.1| putative non-LTR retroelement reverse transcriptase [Arabidopsis
           thaliana]
          Length = 1374

 Score = 79.7 bits (195), Expect = 8e-13
 Identities = 42/104 (40%), Positives = 61/104 (58%), Gaps = 7/104 (6%)
 Frame = +1

Query: 592 WM*LPKILR-------WIRTLCYLVRLF*RIFLAESGSQGKHFIPTREIRQGDPLSPYLF 750
           W  L K +R       WIR +   V+   R  +  +G+     IP+R +RQGDPLSPYLF
Sbjct: 586 WPFLEKAMRGLGFADHWIRLIMECVKSV-RYQVLINGTPHGEIIPSRGLRQGDPLSPYLF 644

Query: 751 ILCMEALSRYLLLAQKKGLIHGIKITKNGPPINHLMFLDDCMIF 882
           ++C E L + L  A++K  I G+K+ +  PPI+HL+F DD M +
Sbjct: 645 VICTEMLVKMLQSAEQKNQITGLKVARGAPPISHLLFADDSMFY 688


>ref|XP_002454941.1| hypothetical protein SORBIDRAFT_03g001780 [Sorghum bicolor]
           gi|241926916|gb|EES00061.1| hypothetical protein
           SORBIDRAFT_03g001780 [Sorghum bicolor]
          Length = 631

 Score = 78.6 bits (192), Expect = 2e-12
 Identities = 39/90 (43%), Positives = 55/90 (61%)
 Frame = +1

Query: 610 ILRWIRTLCYLVRLF*RIFLAESGSQGKHFIPTREIRQGDPLSPYLFILCMEALSRYLLL 789
           I++ + T+ Y +++        + S  +   P R +RQGDPLSPYLFI+C E LS  L  
Sbjct: 187 IMKCVTTVTYKIKV--------NDSYTQKIFPQRGLRQGDPLSPYLFIICAEGLSAMLQK 238

Query: 790 AQKKGLIHGIKITKNGPPINHLMFLDDCMI 879
           A++KG I GIKI +  P +NHL F DD +I
Sbjct: 239 AEQKGKIEGIKICRGAPKVNHLFFADDSLI 268


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