BLASTX nr result
ID: Papaver23_contig00030363
seq
BLASTX 2.2.25 [Feb-01-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= Papaver23_contig00030363
(548 letters)
Database: ./nr
23,641,837 sequences; 8,123,359,852 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
gb|AAD29058.1| putative non-LTR retroelement reverse transcripta... 64 1e-20
ref|XP_002438569.1| hypothetical protein SORBIDRAFT_10g022040 [S... 82 2e-19
emb|CCA66040.1| hypothetical protein [Beta vulgaris subsp. vulga... 67 3e-19
pir||T00833 RNA-directed DNA polymerase homolog T13L16.7 - Arabi... 76 2e-18
gb|AFP55557.1| non-ltr retroelement reverse transcriptase [Rosa ... 69 1e-17
>gb|AAD29058.1| putative non-LTR retroelement reverse transcriptase [Arabidopsis
thaliana]
Length = 1229
Score = 63.9 bits (154), Expect(3) = 1e-20
Identities = 30/79 (37%), Positives = 47/79 (59%)
Frame = +3
Query: 312 P*WFSTSFFKEHWDIVKNDVINLVQDFFRKKYLLK*INYTYITHIPKSQNPSNPSDFRPI 491
P F+ F+ +W I+ DV ++ FF K + +N T+I IPK P +D+RPI
Sbjct: 343 PDGFTAGFYHSYWHIISTDVGREIRLFFTSKNFPRRMNETHIRLIPKDLGPRKVADYRPI 402
Query: 492 SLSNTTYKIISKILTNRLK 548
+L N YKI++KI+T R++
Sbjct: 403 ALCNIFYKIVAKIMTKRMQ 421
Score = 48.5 bits (114), Expect(3) = 1e-20
Identities = 19/40 (47%), Positives = 29/40 (72%)
Frame = +1
Query: 205 IEPCISHNDNTMLNKMPDETEIKNTLFNINPWGSPGPDGF 324
IEP +S DN L ++P++ E+K+ +F+IN +PGPDGF
Sbjct: 307 IEPMVSQGDNDFLTRIPNDEEVKDAVFSINASKAPGPDGF 346
Score = 32.0 bits (71), Expect(3) = 1e-20
Identities = 15/51 (29%), Positives = 26/51 (50%)
Frame = +2
Query: 17 DKNTFFLHQTANNRRRVNYIHTLRDDMGMWIDDSSQMHNMLIKHFKNISTS 169
D+NT + H NRR N + + D G+ + Q+ ++ +F+ I TS
Sbjct: 244 DRNTGYFHAVTRNRRTQNRLTVMEDINGVAQHEEHQISQIISGYFQQIFTS 294
>ref|XP_002438569.1| hypothetical protein SORBIDRAFT_10g022040 [Sorghum bicolor]
gi|241916792|gb|EER89936.1| hypothetical protein
SORBIDRAFT_10g022040 [Sorghum bicolor]
Length = 1088
Score = 82.4 bits (202), Expect(3) = 2e-19
Identities = 39/79 (49%), Positives = 49/79 (62%)
Frame = +3
Query: 312 P*WFSTSFFKEHWDIVKNDVINLVQDFFRKKYLLK*INYTYITHIPKSQNPSNPSDFRPI 491
P + F+K W+ DV+NLV DF+ YL IN TYI IPK NP+ P D+RPI
Sbjct: 455 PDGLNAEFYKSSWEWTGKDVVNLVTDFYNNNYLHPDINKTYIAMIPKVNNPNTPRDYRPI 514
Query: 492 SLSNTTYKIISKILTNRLK 548
SL N YKII+K L +R+K
Sbjct: 515 SLCNVVYKIIAKSLVDRIK 533
Score = 31.6 bits (70), Expect(3) = 2e-19
Identities = 20/52 (38%), Positives = 27/52 (51%), Gaps = 1/52 (1%)
Frame = +2
Query: 17 DKNTFFLHQTANNRRRVNYI-HTLRDDMGMWIDDSSQMHNMLIKHFKNISTS 169
D+NT F HQ R R N I H ++ D G + SQ+ + +FK I TS
Sbjct: 354 DRNTKFFHQAILKRARRNTISHFIKPD-GSYATTQSQLAKVANNYFKEIFTS 404
Score = 26.9 bits (58), Expect(3) = 2e-19
Identities = 11/30 (36%), Positives = 17/30 (56%)
Frame = +1
Query: 232 NTMLNKMPDETEIKNTLFNINPWGSPGPDG 321
N + +PD +EI + N+ +PGPDG
Sbjct: 428 NPFTDSVPDSSEILAIIKNMRSNAAPGPDG 457
>emb|CCA66040.1| hypothetical protein [Beta vulgaris subsp. vulgaris]
Length = 1362
Score = 67.4 bits (163), Expect(3) = 3e-19
Identities = 35/72 (48%), Positives = 46/72 (63%)
Frame = +3
Query: 333 FFKEHWDIVKNDVINLVQDFFRKKYLLK*INYTYITHIPKSQNPSNPSDFRPISLSNTTY 512
FF++ W I+ +DVI+ VQ ++R L +N T I IPK +P + DFRPISL Y
Sbjct: 458 FFQKFWHILGSDVISFVQSWWRGMGDLGVVNKTCIVLIPKCDHPQSMKDFRPISLCTVLY 517
Query: 513 KIISKILTNRLK 548
KI+SK L NRLK
Sbjct: 518 KILSKTLANRLK 529
Score = 39.3 bits (90), Expect(3) = 3e-19
Identities = 20/61 (32%), Positives = 36/61 (59%), Gaps = 1/61 (1%)
Frame = +2
Query: 5 IKDCDKNTFFLHQTANNRRRVNYIHTLRDDMGMWIDDSSQMHNMLIKHFKNI-STSCNVS 181
I+D DKNT + H A+ R+R N I+ L D+ G+W ++ ++ +F+ + +T V+
Sbjct: 348 IRDGDKNTKYFHHKASQRKRRNTINELLDENGVWKKGREEICGVVQHYFEGLFATDSPVN 407
Query: 182 M 184
M
Sbjct: 408 M 408
Score = 33.5 bits (75), Expect(3) = 3e-19
Identities = 15/36 (41%), Positives = 22/36 (61%)
Frame = +1
Query: 214 CISHNDNTMLNKMPDETEIKNTLFNINPWGSPGPDG 321
C+S + NT L +P E+K LF ++P +PG DG
Sbjct: 418 CVSTDMNTALLMLPSGDEVKEALFAMHPNKAPGIDG 453
>pir||T00833 RNA-directed DNA polymerase homolog T13L16.7 - Arabidopsis thaliana
(fragment)
Length = 1365
Score = 75.9 bits (185), Expect(3) = 2e-18
Identities = 38/79 (48%), Positives = 51/79 (64%)
Frame = +3
Query: 312 P*WFSTSFFKEHWDIVKNDVINLVQDFFRKKYLLK*INYTYITHIPKSQNPSNPSDFRPI 491
P F+ FF++HWD+VK+ ++ + FF L + N+T+I IPK +P SD RPI
Sbjct: 447 PDGFTALFFQQHWDLVKHQILTEIFGFFETGVLPQDWNHTHICLIPKITSPQRMSDLRPI 506
Query: 492 SLSNTTYKIISKILTNRLK 548
SL + YKIISKILT RLK
Sbjct: 507 SLCSVLYKIISKILTQRLK 525
Score = 32.0 bits (71), Expect(3) = 2e-18
Identities = 16/46 (34%), Positives = 26/46 (56%)
Frame = +1
Query: 187 NRLSTLIEPCISHNDNTMLNKMPDETEIKNTLFNINPWGSPGPDGF 324
N L L S ++ ++ ++ E E+ N +F+IN +PGPDGF
Sbjct: 406 NHLEGLQAKVTSEMNHNLIQEVT-ELEVYNAVFSINKESAPGPDGF 450
Score = 29.6 bits (65), Expect(3) = 2e-18
Identities = 16/51 (31%), Positives = 24/51 (47%)
Frame = +2
Query: 17 DKNTFFLHQTANNRRRVNYIHTLRDDMGMWIDDSSQMHNMLIKHFKNISTS 169
DKNT F H T ++ R N + L D+ +S + F+N+ TS
Sbjct: 348 DKNTGFFHATVHSERLKNELSFLLDENDQEFTRNSDKGKIASSFFENLFTS 398
>gb|AFP55557.1| non-ltr retroelement reverse transcriptase [Rosa rugosa]
Length = 1747
Score = 69.3 bits (168), Expect(3) = 1e-17
Identities = 31/72 (43%), Positives = 47/72 (65%)
Frame = +3
Query: 333 FFKEHWDIVKNDVINLVQDFFRKKYLLK*INYTYITHIPKSQNPSNPSDFRPISLSNTTY 512
FF++ W+I+ NDV+++ F + N++ I IPK QNP +++RPISL N Y
Sbjct: 743 FFQKFWNIIGNDVVDVCLRFLNGDGSIADFNHSLIALIPKVQNPKKVTEYRPISLCNVVY 802
Query: 513 KIISKILTNRLK 548
K++SK+L NRLK
Sbjct: 803 KLVSKVLANRLK 814
Score = 38.5 bits (88), Expect(3) = 1e-17
Identities = 19/56 (33%), Positives = 30/56 (53%)
Frame = +2
Query: 17 DKNTFFLHQTANNRRRVNYIHTLRDDMGMWIDDSSQMHNMLIKHFKNISTSCNVSM 184
D+NT F HQTA R R N I + + W D + + + + +F+N+ T+ SM
Sbjct: 637 DRNTQFFHQTAKQRGRSNRICGILGEDNRWRSDVTDIGCVFVSYFRNLFTAGGGSM 692
Score = 26.9 bits (58), Expect(3) = 1e-17
Identities = 17/46 (36%), Positives = 24/46 (52%), Gaps = 3/46 (6%)
Frame = +1
Query: 199 TLIEPCISHNDNTM---LNKMPDETEIKNTLFNINPWGSPGPDGFP 327
T+ E S D T L+++ EI+ L ++NP SPG DG P
Sbjct: 695 TIFEAVTSRVDATSKKSLDQVYRREEIELALKDMNPSKSPGSDGMP 740