BLASTX nr result

ID: Papaver23_contig00030171 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Papaver23_contig00030171
         (549 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002280099.1| PREDICTED: RNA-dependent RNA polymerase 2 [V...   150   1e-34
ref|XP_004166498.1| PREDICTED: RNA-dependent RNA polymerase 2-li...   137   9e-31
ref|XP_004138117.1| PREDICTED: RNA-dependent RNA polymerase 2-li...   137   9e-31
gb|AAU21243.1| putative RNA-dependent RNA polymerase RdRP2 [Nico...   134   9e-30
gb|ADU04145.1| hypothetical protein [Gossypium hirsutum]              126   2e-27

>ref|XP_002280099.1| PREDICTED: RNA-dependent RNA polymerase 2 [Vitis vinifera]
           gi|297733815|emb|CBI15062.3| unnamed protein product
           [Vitis vinifera]
          Length = 1127

 Score =  150 bits (379), Expect = 1e-34
 Identities = 78/183 (42%), Positives = 109/183 (59%)
 Frame = +1

Query: 1   AKDLLKFFEDILGKDTVYALEIFTERKNWKSKGHGLVQFETIDSVNTINHLSETGKLIFQ 180
           AK+L  F E  LG +T+YALEI TE KNWKS+G G VQFET+ +    + LS  G L+F+
Sbjct: 20  AKELWSFLESKLGPNTIYALEIATEHKNWKSRGFGRVQFETLQAKRAADLLSLQGDLVFR 79

Query: 181 GINLKISPSFKEIIIRPTQSYNRXXXXXXXXXXXXQNDRFYVLESWKSVKVDVLPEKHRV 360
           G +L IS +F +II+RP +  N+            ++D   VLESW+ VK  V+PE++RV
Sbjct: 80  GSSLSISATFDDIIVRPVEPRNQVDSGVLHVGFLVEDDCMLVLESWEGVKTLVMPERNRV 139

Query: 361 EFWVVENGETYKLVVQFGDVISSAGYCLGXXXXXXXXXXXXXXPKIYHKISKPDNSASVG 540
           EFWV ++GE YKL V F DV+ S+  CLG              PKI+ K + P+ ++   
Sbjct: 140 EFWVDKDGERYKLEVPFDDVLESSACCLGGGKVNALLLKLKYAPKIFQKFAGPNIASKFS 199

Query: 541 NNR 549
            +R
Sbjct: 200 ADR 202


>ref|XP_004166498.1| PREDICTED: RNA-dependent RNA polymerase 2-like [Cucumis sativus]
          Length = 1117

 Score =  137 bits (346), Expect = 9e-31
 Identities = 70/183 (38%), Positives = 102/183 (55%)
 Frame = +1

Query: 1   AKDLLKFFEDILGKDTVYALEIFTERKNWKSKGHGLVQFETIDSVNTINHLSETGKLIFQ 180
           A+DLL F    LG D+V+A+EIFTERKNWKS+G G VQF T+++      LS    L+F 
Sbjct: 20  AQDLLNFLNSKLGPDSVFAIEIFTERKNWKSRGSGRVQFTTLEAKAKAMSLSVQNSLVFG 79

Query: 181 GINLKISPSFKEIIIRPTQSYNRXXXXXXXXXXXXQNDRFYVLESWKSVKVDVLPEKHRV 360
             NL+ S    +I++RP  + NR            + +R  VLESW+ VK  ++PE+ R+
Sbjct: 80  TQNLRFSLINDDIVVRPVHATNRTENGVLHVGFMLKEERMSVLESWEGVKAWIMPERRRI 139

Query: 361 EFWVVENGETYKLVVQFGDVISSAGYCLGXXXXXXXXXXXXXXPKIYHKISKPDNSASVG 540
           EFW+    E YKL V F +++ + G+CLG              P+IY KIS  + ++   
Sbjct: 140 EFWIWHEQECYKLEVMFEEILETTGHCLGEEKLNALLLKLKYAPRIYKKISGSNMASRFS 199

Query: 541 NNR 549
           + R
Sbjct: 200 STR 202


>ref|XP_004138117.1| PREDICTED: RNA-dependent RNA polymerase 2-like [Cucumis sativus]
           gi|316989905|gb|ADU77018.1| RNA-dependent RNA polymerase
           2 [Cucumis sativus]
          Length = 1117

 Score =  137 bits (346), Expect = 9e-31
 Identities = 70/183 (38%), Positives = 102/183 (55%)
 Frame = +1

Query: 1   AKDLLKFFEDILGKDTVYALEIFTERKNWKSKGHGLVQFETIDSVNTINHLSETGKLIFQ 180
           A+DLL F    LG D+V+A+EIFTERKNWKS+G G VQF T+++      LS    L+F 
Sbjct: 20  AQDLLNFLNSKLGPDSVFAIEIFTERKNWKSRGSGRVQFTTLEAKAKAMSLSVQNSLVFG 79

Query: 181 GINLKISPSFKEIIIRPTQSYNRXXXXXXXXXXXXQNDRFYVLESWKSVKVDVLPEKHRV 360
             NL+ S    +I++RP  + NR            + +R  VLESW+ VK  ++PE+ R+
Sbjct: 80  TQNLRFSLINDDIVVRPVHATNRTENGVLHVGFMLKEERMSVLESWEGVKAWIMPERRRI 139

Query: 361 EFWVVENGETYKLVVQFGDVISSAGYCLGXXXXXXXXXXXXXXPKIYHKISKPDNSASVG 540
           EFW+    E YKL V F +++ + G+CLG              P+IY KIS  + ++   
Sbjct: 140 EFWIWHEQECYKLEVMFEEILETTGHCLGEEKLNALLLKLKYAPRIYKKISGSNMASRFS 199

Query: 541 NNR 549
           + R
Sbjct: 200 STR 202


>gb|AAU21243.1| putative RNA-dependent RNA polymerase RdRP2 [Nicotiana benthamiana]
          Length = 1120

 Score =  134 bits (337), Expect = 9e-30
 Identities = 74/184 (40%), Positives = 104/184 (56%), Gaps = 1/184 (0%)
 Frame = +1

Query: 1   AKDLLKFFEDILGKDTVYALEIFTERKNWKSKGHGLVQFETIDSVNTINHLSETGKLIFQ 180
           AK L  FFE  +GK +V+A +IF+E KNWKS+GHG VQFET  S      LSE GKL+F+
Sbjct: 22  AKQLFDFFESSIGKGSVFACDIFSEHKNWKSRGHGRVQFETSQSKLQSLSLSEQGKLVFK 81

Query: 181 GINLKISPSFKEIIIRPTQSYNRXXXXXXXXXXXXQNDRFYVLESWKSVKVDVLPEKHRV 360
           G  L ++ SF +II RP +   R            +ND   VLE+W++VK  ++PE+  +
Sbjct: 82  GHQLILTSSFDDIIARPIELNYRFQKGILHTGILLENDYMEVLETWENVKTLIMPERKSL 141

Query: 361 EFWVVE-NGETYKLVVQFGDVISSAGYCLGXXXXXXXXXXXXXXPKIYHKISKPDNSASV 537
           EFWV    GE Y+L VQFGD+I +   C                PK+Y ++S P  ++  
Sbjct: 142 EFWVSHAKGECYRLEVQFGDIIETC-ECSLEDEKTALLLKLKHAPKLYQRVSGPGVASKF 200

Query: 538 GNNR 549
            ++R
Sbjct: 201 SSDR 204


>gb|ADU04145.1| hypothetical protein [Gossypium hirsutum]
          Length = 1147

 Score =  126 bits (317), Expect = 2e-27
 Identities = 67/183 (36%), Positives = 100/183 (54%)
 Frame = +1

Query: 1   AKDLLKFFEDILGKDTVYALEIFTERKNWKSKGHGLVQFETIDSVNTINHLSETGKLIFQ 180
           AKDLL FFE  LG D+V+A+EI T+R NWKS+G G VQF    + +    LS    L+F+
Sbjct: 22  AKDLLDFFESKLGPDSVFAIEISTDRNNWKSRGFGRVQFAAPQAKSDALRLSRHDHLLFK 81

Query: 181 GINLKISPSFKEIIIRPTQSYNRXXXXXXXXXXXXQNDRFYVLESWKSVKVDVLPEKHRV 360
             +LK+S ++ +II RP ++ +R             +D   VLE W+ V+  ++PE+ R+
Sbjct: 82  SHSLKLSRTYDDIIPRPIRADHRLDGGVLHAGFMSSDDCLRVLERWEGVRGWIMPERRRL 141

Query: 361 EFWVVENGETYKLVVQFGDVISSAGYCLGXXXXXXXXXXXXXXPKIYHKISKPDNSASVG 540
           EFWV  +GE YKL   F D+  + G C                P+IY K+S P+ ++   
Sbjct: 142 EFWVWTDGECYKLDFLFDDIFETVGCCFDGSACNALLLRVRYAPRIYQKVSGPNVASKFS 201

Query: 541 NNR 549
            +R
Sbjct: 202 TDR 204


Top