BLASTX nr result

ID: Papaver23_contig00030103 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Papaver23_contig00030103
         (527 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|NP_192778.2| F-box protein [Arabidopsis thaliana] gi|1453330...    86   3e-15
emb|CAB39793.1| putative protein [Arabidopsis thaliana] gi|72677...    86   3e-15
ref|NP_191051.2| leucine rich repeat and F-Box domain-containing...    82   4e-14
dbj|BAD95186.1| hypothetical protein [Arabidopsis thaliana]            82   4e-14
ref|NP_192730.2| FBD, F-box and leucine rich repeat domain-conta...    82   5e-14

>ref|NP_192778.2| F-box protein [Arabidopsis thaliana]
           gi|145333003|ref|NP_001078367.1| F-box protein
           [Arabidopsis thaliana]
           gi|142989615|sp|Q9SV82.2|FBD40_ARATH RecName:
           Full=FBD-associated F-box protein At4g10400
           gi|119935957|gb|ABM06044.1| At4g10400 [Arabidopsis
           thaliana] gi|332657476|gb|AEE82876.1| F-box protein
           [Arabidopsis thaliana] gi|332657477|gb|AEE82877.1| F-box
           protein [Arabidopsis thaliana]
          Length = 409

 Score = 86.3 bits (212), Expect = 3e-15
 Identities = 56/179 (31%), Positives = 97/179 (54%), Gaps = 6/179 (3%)
 Frame = +1

Query: 4   LTCDGEYFDDQRIKAWITTAIKCRVEEL-IVSRDAIEDVDIIPVDLYTCESLTLLDIDLY 180
           L     +F  + I+ W+  A+   + EL I S    E  +I+P  LYTC+SL +L +D  
Sbjct: 80  LVLSDSHFKPEDIRMWVVVAVSRYIRELKIYSSHYGEKQNILPSSLYTCKSLVILKLD-- 137

Query: 181 GGQHLNLPQLISFPRLKILQLSEISVFRQRNIQQLFSNCPVLEELCLK---YCLLNHLNI 351
           GG  L++P+++  P LK L+L  +  F+Q ++Q+L  NCPVLE+L +    +  +  L +
Sbjct: 138 GGVLLDVPRMVCLPSLKTLELKGVRYFKQGSLQRLLCNCPVLEDLVVNLSHHDNMGKLTV 197

Query: 352 ISSTLKSLTFVSSLHICMSDIKIMIDAPNLMSITIHD--GIPQHLVVESFPSLVDADIH 522
           I  +L+ L+  +      S  + +ID P+L+S  + D        ++E+ P L +A I+
Sbjct: 198 IVPSLQRLSLSTP-----SSREFVIDTPSLLSFQLVDRNDNSHTFLIENMPKLREAYIN 251


>emb|CAB39793.1| putative protein [Arabidopsis thaliana] gi|7267737|emb|CAB78163.1|
           putative protein [Arabidopsis thaliana]
          Length = 326

 Score = 86.3 bits (212), Expect = 3e-15
 Identities = 56/179 (31%), Positives = 97/179 (54%), Gaps = 6/179 (3%)
 Frame = +1

Query: 4   LTCDGEYFDDQRIKAWITTAIKCRVEEL-IVSRDAIEDVDIIPVDLYTCESLTLLDIDLY 180
           L     +F  + I+ W+  A+   + EL I S    E  +I+P  LYTC+SL +L +D  
Sbjct: 80  LVLSDSHFKPEDIRMWVVVAVSRYIRELKIYSSHYGEKQNILPSSLYTCKSLVILKLD-- 137

Query: 181 GGQHLNLPQLISFPRLKILQLSEISVFRQRNIQQLFSNCPVLEELCLK---YCLLNHLNI 351
           GG  L++P+++  P LK L+L  +  F+Q ++Q+L  NCPVLE+L +    +  +  L +
Sbjct: 138 GGVLLDVPRMVCLPSLKTLELKGVRYFKQGSLQRLLCNCPVLEDLVVNLSHHDNMGKLTV 197

Query: 352 ISSTLKSLTFVSSLHICMSDIKIMIDAPNLMSITIHD--GIPQHLVVESFPSLVDADIH 522
           I  +L+ L+  +      S  + +ID P+L+S  + D        ++E+ P L +A I+
Sbjct: 198 IVPSLQRLSLSTP-----SSREFVIDTPSLLSFQLVDRNDNSHTFLIENMPKLREAYIN 251


>ref|NP_191051.2| leucine rich repeat and F-Box domain-containing protein
           [Arabidopsis thaliana] gi|79315081|ref|NP_001030863.1|
           leucine rich repeat and F-Box domain-containing protein
           [Arabidopsis thaliana] gi|145332847|ref|NP_001078289.1|
           leucine rich repeat and F-Box domain-containing protein
           [Arabidopsis thaliana] gi|63003866|gb|AAY25462.1|
           At3g54910 [Arabidopsis thaliana]
           gi|332645789|gb|AEE79310.1| leucine rich repeat and
           F-Box domain-containing protein [Arabidopsis thaliana]
           gi|332645790|gb|AEE79311.1| leucine rich repeat and
           F-Box domain-containing protein [Arabidopsis thaliana]
           gi|332645791|gb|AEE79312.1| leucine rich repeat and
           F-Box domain-containing protein [Arabidopsis thaliana]
          Length = 373

 Score = 82.4 bits (202), Expect = 4e-14
 Identities = 51/166 (30%), Positives = 93/166 (56%), Gaps = 4/166 (2%)
 Frame = +1

Query: 34  QRIKAWITTAIKCRVEEL-IVSRDAIEDVDIIPVDLYTCESLTLLDIDLYGGQHLNLPQL 210
           + IK W+  A+   + EL ++     E  +I+P +LYTC+SL +L+  L G   L++P++
Sbjct: 50  ENIKMWVVIAVSHCLRELEVIYSSYPEKPNILPSNLYTCKSLVILE--LCGEIRLDVPRM 107

Query: 211 ISFPRLKILQLSEISVFRQRNIQQLFSNCPVLEELCLKYCLLNHLNIISSTLKSLTFVSS 390
              P LK LQL  +    + ++ +L SNCPVLE+L +   L + +  ++  + SL  +S 
Sbjct: 108 AFLPSLKTLQLHSVRYLNEDSLHRLLSNCPVLEDLLVDLLLSDSMEKLTVVVPSLQILSL 167

Query: 391 LHICMSDIK-IMIDAPNL--MSITIHDGIPQHLVVESFPSLVDADI 519
                 +I  I+I+ P+L    +  H+    + +V++ P+L++ADI
Sbjct: 168 FIPHSYEIDGIVIETPSLKYFKLIDHNSKSHYCLVKNMPNLIEADI 213


>dbj|BAD95186.1| hypothetical protein [Arabidopsis thaliana]
          Length = 246

 Score = 82.4 bits (202), Expect = 4e-14
 Identities = 51/166 (30%), Positives = 93/166 (56%), Gaps = 4/166 (2%)
 Frame = +1

Query: 34  QRIKAWITTAIKCRVEEL-IVSRDAIEDVDIIPVDLYTCESLTLLDIDLYGGQHLNLPQL 210
           + IK W+  A+   + EL ++     E  +I+P +LYTC+SL +L+  L G   L++P++
Sbjct: 50  ENIKMWVVIAVSHCLRELEVIYSSYPEKPNILPSNLYTCKSLVILE--LCGEIRLDVPRM 107

Query: 211 ISFPRLKILQLSEISVFRQRNIQQLFSNCPVLEELCLKYCLLNHLNIISSTLKSLTFVSS 390
              P LK LQL  +    + ++ +L SNCPVLE+L +   L + +  ++  + SL  +S 
Sbjct: 108 AFLPSLKTLQLHSVRYLNEDSLHRLLSNCPVLEDLLVDLLLSDSMEKLTVVVPSLQILSL 167

Query: 391 LHICMSDIK-IMIDAPNL--MSITIHDGIPQHLVVESFPSLVDADI 519
                 +I  I+I+ P+L    +  H+    + +V++ P+L++ADI
Sbjct: 168 FIPHSYEIDGIVIETPSLKYFKLIDHNSKSHYCLVKNMPNLIEADI 213


>ref|NP_192730.2| FBD, F-box and leucine rich repeat domain-containing protein
           [Arabidopsis thaliana]
           gi|378405162|sp|Q9T0F1.2|FB226_ARATH RecName: Full=F-box
           protein At4g09920 gi|332657412|gb|AEE82812.1| FBD, F-box
           and leucine rich repeat domain-containing protein
           [Arabidopsis thaliana]
          Length = 316

 Score = 82.0 bits (201), Expect = 5e-14
 Identities = 52/175 (29%), Positives = 90/175 (51%), Gaps = 5/175 (2%)
 Frame = +1

Query: 4   LTCDGEYFDDQRIKAWITTAIKCRVEEL-IVSRDAIEDVDIIPVDLYTCESLTLLDIDLY 180
           L     +F  + I+ W+  A+   + EL I S    E  +I+P  LYTC+SL +L +D  
Sbjct: 80  LVLSDSHFKPEDIRMWVVVAVSRYIRELKIYSSHYGEKQNILPSSLYTCKSLVILKLD-- 137

Query: 181 GGQHLNLPQLISFPRLKILQLSEISVFRQRNIQQLFSNCPVLEELCLKYCLLNHLN---I 351
           GG  L++P+++  P LK L+L  +  F+Q ++Q+L  NCPVLE+L +     + +    +
Sbjct: 138 GGVLLDVPRMVCLPSLKTLELKGVRYFKQGSLQRLLCNCPVLEDLFVLLLRCDDIGMFIV 197

Query: 352 ISSTLKSLTFVSSLHICMSDIKIMIDAPNLMSITIHDGIPQH-LVVESFPSLVDA 513
           I  +L+ L+   S    +    I++D P      +     +H  ++E+ P L  A
Sbjct: 198 IVPSLQRLSLYLSPRCNLEGFVIVLDTPLEYFKLVDRNYDRHPYMIENMPKLTSA 252


Top