BLASTX nr result

ID: Papaver23_contig00030012 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Papaver23_contig00030012
         (513 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

emb|CCA66036.1| hypothetical protein [Beta vulgaris subsp. vulga...    55   5e-06
dbj|BAB08714.1| non-LTR retroelement reverse transcriptase-like ...    55   8e-06

>emb|CCA66036.1| hypothetical protein [Beta vulgaris subsp. vulgaris]
          Length = 1369

 Score = 55.5 bits (132), Expect = 5e-06
 Identities = 31/91 (34%), Positives = 47/91 (51%), Gaps = 4/91 (4%)
 Frame = +3

Query: 243 IQSWNCRGLGNETAISILNSFLRACKPSILFLSETRLNDRNNERICNSLSFQHHHYV--- 413
           I SWNCRG+G+ +A+S L   L +  P I+FLSET+L     E +   L ++H   V   
Sbjct: 4   ILSWNCRGMGSPSALSALRRLLASENPQIVFLSETKLKSYEMESVKKKLKWEHMVAVDCE 63

Query: 414 -PXXXXXXXXXXXWKDSIELEVISSSDNLIN 503
                        W+  I+++V+S S N I+
Sbjct: 64  GECRKRRGGLAMLWRSEIKVQVMSMSSNHID 94


>dbj|BAB08714.1| non-LTR retroelement reverse transcriptase-like protein
           [Arabidopsis thaliana]
          Length = 1197

 Score = 54.7 bits (130), Expect = 8e-06
 Identities = 28/92 (30%), Positives = 46/92 (50%), Gaps = 4/92 (4%)
 Frame = +3

Query: 249 SWNCRGLGNETAISILNSFLRACKPSILFLSETRLNDRNNERICNSLSF--QHHHYV--P 416
           SWNC+G+GN   +  +   L+   P ++FL ET   D   E +   L F  +++H++  P
Sbjct: 2   SWNCQGIGNPKTVRRVREILKKLSPDVIFLMETMNQD---EVVLKKLDFLKRYNHFLVSP 58

Query: 417 XXXXXXXXXXXWKDSIELEVISSSDNLINCNV 512
                      WK  +E+ ++SS DN I+  V
Sbjct: 59  SGQGKGGLALFWKHDVEMAIVSSCDNFIDARV 90


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