BLASTX nr result

ID: Papaver23_contig00030010 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Papaver23_contig00030010
         (822 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

emb|CAN68364.1| hypothetical protein VITISV_021899 [Vitis vinifera]   166   6e-39
gb|ABA94310.1| retrotransposon protein, putative, Ty3-gypsy subc...   159   9e-37
gb|ABG00000.1| retrotransposon protein, putative, Ty1-copia subc...   159   9e-37
gb|AAK02020.2|AC074283_1 Putative gag-pol polyprotein [Oryza sat...   157   2e-36
gb|AAK55460.1|AC069300_15 putative gag-pol polyprotein [Oryza sa...   157   4e-36

>emb|CAN68364.1| hypothetical protein VITISV_021899 [Vitis vinifera]
          Length = 431

 Score =  166 bits (420), Expect = 6e-39
 Identities = 83/152 (54%), Positives = 104/152 (68%)
 Frame = -1

Query: 624 PIPLRPTSGYCVYLGSNLISWSARKHKIVSKSSTEAEYRGLAIAIAELMWIESLLKELQV 445
           P   R TSGYC++ G NL+SWSA K K+VS+SSTE+EYRGLA A AEL WI+SLLKEL +
Sbjct: 178 PDDRRSTSGYCIFFGGNLVSWSASKQKVVSRSSTESEYRGLANAAAELTWIQSLLKELFI 237

Query: 444 PVCTPPDVWCDNLGATYLTMNPIFHGRTKHIEIDYYFVRERVQRG*LLVRFVCSKDQIAD 265
           P+  PP ++CDNL  TYL  NPI H R KH+EIDY+FVRERV +  L VRF+ S+DQ+AD
Sbjct: 238 PLFQPPVLYCDNLSTTYLAANPILHSRAKHVEIDYHFVRERVLQKTLDVRFLPSEDQVAD 297

Query: 264 VFTKXXXXXXXXXXXXXLTISDHPLRSREGVR 169
           + TK             LT+   P+  R  V+
Sbjct: 298 ILTKSLSTQHFLHLRSKLTVLSRPVCLRGDVK 329


>gb|ABA94310.1| retrotransposon protein, putative, Ty3-gypsy subclass [Oryza sativa
            Japonica Group]
          Length = 1762

 Score =  159 bits (401), Expect = 9e-37
 Identities = 74/120 (61%), Positives = 94/120 (78%)
 Frame = -1

Query: 612  RPTSGYCVYLGSNLISWSARKHKIVSKSSTEAEYRGLAIAIAELMWIESLLKELQVPVCT 433
            R T G+ +Y G NL+SWSARK + VS+SSTEAEY+ +A A AEL+W+ S+L+EL V +  
Sbjct: 1624 RSTGGFVIYFGPNLVSWSARKQRTVSRSSTEAEYKAMANATAELIWVRSVLEELGVKIDQ 1683

Query: 432  PPDVWCDNLGATYLTMNPIFHGRTKHIEIDYYFVRERVQRG*LLVRFVCSKDQIADVFTK 253
             P +WCDNLGATYL+ NP+FH RTKHIEIDY+FV+ERV    L +RF+ +KDQIAD FTK
Sbjct: 1684 SPVLWCDNLGATYLSSNPVFHARTKHIEIDYHFVQERVANKMLDIRFIGTKDQIADGFTK 1743


>gb|ABG00000.1| retrotransposon protein, putative, Ty1-copia subclass [Oryza sativa
            Japonica Group]
          Length = 2074

 Score =  159 bits (401), Expect = 9e-37
 Identities = 75/120 (62%), Positives = 94/120 (78%)
 Frame = -1

Query: 612  RPTSGYCVYLGSNLISWSARKHKIVSKSSTEAEYRGLAIAIAELMWIESLLKELQVPVCT 433
            R T G+ V+LGSNL+SWSARK   VS+SSTEAEY+ +A A AE+MW+++LLKEL +    
Sbjct: 1936 RSTGGFAVFLGSNLVSWSARKQATVSRSSTEAEYKAVANATAEVMWVQALLKELGINSPE 1995

Query: 432  PPDVWCDNLGATYLTMNPIFHGRTKHIEIDYYFVRERVQRG*LLVRFVCSKDQIADVFTK 253
               +WCDNLGATYL +NP+FH RTKHIEIDY+FVRERV R  L ++F+ S DQ+AD FTK
Sbjct: 1996 TACMWCDNLGATYLAVNPVFHARTKHIEIDYHFVRERVARKQLEIKFISSGDQVADGFTK 2055


>gb|AAK02020.2|AC074283_1 Putative gag-pol polyprotein [Oryza sativa]
            gi|31430072|gb|AAP52036.1| retrotransposon protein,
            putative, Ty1-copia subclass [Oryza sativa Japonica
            Group]
          Length = 1058

 Score =  157 bits (398), Expect = 2e-36
 Identities = 74/120 (61%), Positives = 95/120 (79%)
 Frame = -1

Query: 612  RPTSGYCVYLGSNLISWSARKHKIVSKSSTEAEYRGLAIAIAELMWIESLLKELQVPVCT 433
            R T G+ V+LGSNLISW+ARK   VS+SSTEAEY+ LA A AE+MW+  LL+EL +    
Sbjct: 913  RSTGGFAVFLGSNLISWNARKQATVSRSSTEAEYKALANATAEIMWVRKLLEELGISHPG 972

Query: 432  PPDVWCDNLGATYLTMNPIFHGRTKHIEIDYYFVRERVQRG*LLVRFVCSKDQIADVFTK 253
            P  +WCDN+GATYL++NP+FH RTKHIEIDY+FVRE+V +  L ++FV S+DQ+AD FTK
Sbjct: 973  PSQLWCDNIGATYLSVNPVFHARTKHIEIDYHFVREQVAQKQLALQFVPSQDQVADGFTK 1032


>gb|AAK55460.1|AC069300_15 putative gag-pol polyprotein [Oryza sativa Japonica Group]
            gi|31433472|gb|AAP54977.1| retrotransposon protein,
            putative, Ty1-copia subclass [Oryza sativa Japonica
            Group]
          Length = 1031

 Score =  157 bits (396), Expect = 4e-36
 Identities = 73/120 (60%), Positives = 92/120 (76%)
 Frame = -1

Query: 612  RPTSGYCVYLGSNLISWSARKHKIVSKSSTEAEYRGLAIAIAELMWIESLLKELQVPVCT 433
            R T G+ V++G NL+SWSARK   VS+SSTEAEY+ LA A AE+MWI++LL EL + V  
Sbjct: 892  RSTGGFAVFIGPNLVSWSARKQATVSRSSTEAEYKALANATAEIMWIQTLLHELGIQVPK 951

Query: 432  PPDVWCDNLGATYLTMNPIFHGRTKHIEIDYYFVRERVQRG*LLVRFVCSKDQIADVFTK 253
               VWCDN+GA Y+T NP+FH RTKHIE+DY+FVRERV R  L V ++ +KDQ+AD FTK
Sbjct: 952  IAKVWCDNIGAKYMTANPVFHARTKHIEVDYHFVRERVARKLLQVEYISTKDQVADGFTK 1011


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