BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Papaver23_contig00029946
         (574 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

gb|AAD39676.1|AC007591_41 F9L1.43 [Arabidopsis thaliana]               66   7e-12
ref|NP_173001.2| pentatricopeptide repeat-containing protein [Ar...    66   7e-12
ref|XP_002522167.1| pentatricopeptide repeat-containing protein,...    72   8e-11
ref|XP_002890106.1| DNA binding protein [Arabidopsis lyrata subs...    59   9e-11
gb|AFW79512.1| DNA-binding protein [Zea mays]                          66   1e-10

>gb|AAD39676.1|AC007591_41 F9L1.43 [Arabidopsis thaliana]
          Length = 623

 Score = 65.9 bits (159), Expect(2) = 7e-12
 Identities = 48/130 (36%), Positives = 73/130 (56%)
 Frame = +3

Query: 177 LYKKFDKEKVKSVLSFMEENDVEPNLDTYGELLVNGDYAKWFFNQFRPWEKLFDAVENPE 356
           LYK+ DK+K+  VL  +E+ +++PNL+TY ++L++    K   N     E++        
Sbjct: 300 LYKRVDKKKIADVLLLLEKENLKPNLNTY-KILID---TKGSSNDITGMEQI-------- 347

Query: 357 FAKTMERDGFVLIANYIRAKIARHYISQGLNKSAFLVGKAEEIMMHMEGKQGWEENRVAC 536
             +TM+ +G  L     RA IARHY S GL +      KAE+++  MEG +  EENR  C
Sbjct: 348 -VETMKSEGVELDLR-ARALIARHYASAGLKE------KAEKVLKEMEG-ESLEENRHMC 398

Query: 537 KLLLTLYADL 566
           K LL++Y  L
Sbjct: 399 KDLLSVYGYL 408



 Score = 29.6 bits (65), Expect(2) = 7e-12
 Identities = 12/34 (35%), Positives = 24/34 (70%)
 Frame = +2

Query: 68  TVLSFYVDSDDLETAEQLFKEIQDSGSPVSSSDC 169
           T+L+ +V + ++ TAE +F +++D G P+S+  C
Sbjct: 261 TLLANHVATSNVRTAEAVFNKMKDLGFPLSTFTC 294


>ref|NP_173001.2| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
           gi|193806396|sp|Q9XI21.2|PPR44_ARATH RecName:
           Full=Pentatricopeptide repeat-containing protein
           At1g15480, mitochondrial; Flags: Precursor
           gi|332191207|gb|AEE29328.1| pentatricopeptide
           repeat-containing protein [Arabidopsis thaliana]
          Length = 594

 Score = 65.9 bits (159), Expect(2) = 7e-12
 Identities = 48/130 (36%), Positives = 73/130 (56%)
 Frame = +3

Query: 177 LYKKFDKEKVKSVLSFMEENDVEPNLDTYGELLVNGDYAKWFFNQFRPWEKLFDAVENPE 356
           LYK+ DK+K+  VL  +E+ +++PNL+TY ++L++    K   N     E++        
Sbjct: 271 LYKRVDKKKIADVLLLLEKENLKPNLNTY-KILID---TKGSSNDITGMEQI-------- 318

Query: 357 FAKTMERDGFVLIANYIRAKIARHYISQGLNKSAFLVGKAEEIMMHMEGKQGWEENRVAC 536
             +TM+ +G  L     RA IARHY S GL +      KAE+++  MEG +  EENR  C
Sbjct: 319 -VETMKSEGVELDLR-ARALIARHYASAGLKE------KAEKVLKEMEG-ESLEENRHMC 369

Query: 537 KLLLTLYADL 566
           K LL++Y  L
Sbjct: 370 KDLLSVYGYL 379



 Score = 29.6 bits (65), Expect(2) = 7e-12
 Identities = 12/34 (35%), Positives = 24/34 (70%)
 Frame = +2

Query: 68  TVLSFYVDSDDLETAEQLFKEIQDSGSPVSSSDC 169
           T+L+ +V + ++ TAE +F +++D G P+S+  C
Sbjct: 232 TLLANHVATSNVRTAEAVFNKMKDLGFPLSTFTC 265


>ref|XP_002522167.1| pentatricopeptide repeat-containing protein, putative [Ricinus
           communis] gi|223538605|gb|EEF40208.1| pentatricopeptide
           repeat-containing protein, putative [Ricinus communis]
          Length = 342

 Score = 71.6 bits (174), Expect = 8e-11
 Identities = 51/132 (38%), Positives = 70/132 (53%)
 Frame = +3

Query: 177 LYKKFDKEKVKSVLSFMEENDVEPNLDTYGELLVNGDYAKWFFNQFRPWEKLFDAVENPE 356
           LYK+ DK+K+  VL  ME+ +++P+L TY  L+     +              D     +
Sbjct: 19  LYKRLDKKKIADVLLLMEKENIKPSLFTYKLLIDTKGQSN-------------DLTGMDQ 65

Query: 357 FAKTMERDGFVLIANYIRAKIARHYISQGLNKSAFLVGKAEEIMMHMEGKQGWEENRVAC 536
             +TM+ DG     N IRA +A+HY S GL +      KAE I+  MEG    EE+R AC
Sbjct: 66  IVETMKADGIEPDIN-IRAILAKHYASGGLKE------KAEAILKEMEG-GNLEEHRWAC 117

Query: 537 KLLLTLYADLGK 572
           +LLL LYA LGK
Sbjct: 118 RLLLPLYAALGK 129


>ref|XP_002890106.1| DNA binding protein [Arabidopsis lyrata subsp. lyrata]
           gi|297335948|gb|EFH66365.1| DNA binding protein
           [Arabidopsis lyrata subsp. lyrata]
          Length = 594

 Score = 58.9 bits (141), Expect(2) = 9e-11
 Identities = 47/130 (36%), Positives = 72/130 (55%)
 Frame = +3

Query: 177 LYKKFDKEKVKSVLSFMEENDVEPNLDTYGELLVNGDYAKWFFNQFRPWEKLFDAVENPE 356
           LYK+ DK+K+  VL  ME+ +++PNL+TY ++L++    K   N     E++        
Sbjct: 271 LYKRVDKKKIADVLLLMEKENLKPNLNTY-KILID---TKGLSNDITGMEQI-------- 318

Query: 357 FAKTMERDGFVLIANYIRAKIARHYISQGLNKSAFLVGKAEEIMMHMEGKQGWEENRVAC 536
             +TM+ +G V      RA IAR+Y S GL +      KAE+++  MEG +  EENR   
Sbjct: 319 -VETMKSEG-VEPDLRARALIARNYASAGLKE------KAEKVLKEMEG-ESLEENRHVY 369

Query: 537 KLLLTLYADL 566
           K LL++Y  L
Sbjct: 370 KDLLSVYGFL 379



 Score = 32.7 bits (73), Expect(2) = 9e-11
 Identities = 14/34 (41%), Positives = 24/34 (70%)
 Frame = +2

Query: 68  TVLSFYVDSDDLETAEQLFKEIQDSGSPVSSSDC 169
           T+LS YV + ++ TAE +F +++D G P+S+  C
Sbjct: 232 TLLSNYVATSNVRTAEAVFNKMKDLGFPLSTFTC 265


>gb|AFW79512.1| DNA-binding protein [Zea mays]
          Length = 622

 Score = 65.9 bits (159), Expect(2) = 1e-10
 Identities = 47/131 (35%), Positives = 69/131 (52%)
 Frame = +3

Query: 177 LYKKFDKEKVKSVLSFMEENDVEPNLDTYGELLVNGDYAKWFFNQFRPWEKLFDAVENPE 356
           LYK+ D++K+  VL+ ME+ DV+P+L TY ++LV+   AK         EK+ +++E   
Sbjct: 298 LYKRLDRKKIADVLAMMEKEDVKPSLFTY-KILVD---AKGSVGDIEAMEKVIESMEKDS 353

Query: 357 FAKTMERDGFVLIANYIRAKIARHYISQGLNKSAFLVGKAEEIMMHMEGKQGWEENRVAC 536
               +             A IARHYI  G  +      KAE ++  MEG    ++NR AC
Sbjct: 354 IEPDLT----------FNATIARHYIFYGQRE------KAEALLKAMEG-DDIQKNRAAC 396

Query: 537 KLLLTLYADLG 569
           K LL L+A LG
Sbjct: 397 KTLLPLHAFLG 407



 Score = 25.4 bits (54), Expect(2) = 1e-10
 Identities = 10/30 (33%), Positives = 21/30 (70%)
 Frame = +2

Query: 68  TVLSFYVDSDDLETAEQLFKEIQDSGSPVS 157
           T+L+  V + +++ +EQ+F  ++D G PV+
Sbjct: 259 TLLANCVSASNIKKSEQVFNRMKDLGFPVT 288