BLASTX nr result
ID: Papaver23_contig00029903
seq
BLASTX 2.2.25 [Feb-01-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= Papaver23_contig00029903
(1021 letters)
Database: ./nr
23,641,837 sequences; 8,123,359,852 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
ref|XP_002275236.2| PREDICTED: pentatricopeptide repeat-containi... 384 e-104
emb|CAN76112.1| hypothetical protein VITISV_005527 [Vitis vinifera] 384 e-104
ref|XP_002519997.1| pentatricopeptide repeat-containing protein,... 379 e-103
ref|XP_002309826.1| predicted protein [Populus trichocarpa] gi|2... 365 1e-98
ref|XP_003538665.1| PREDICTED: pentatricopeptide repeat-containi... 360 4e-97
>ref|XP_002275236.2| PREDICTED: pentatricopeptide repeat-containing protein At3g18110,
chloroplastic-like [Vitis vinifera]
Length = 1442
Score = 384 bits (985), Expect = e-104
Identities = 195/341 (57%), Positives = 250/341 (73%), Gaps = 1/341 (0%)
Frame = -2
Query: 1020 PDHLAYSVMMDILFRFSETKKGMELYEQMVRDGSKPDQGLYEVMVQALMKENKXXXXXXX 841
PDHLAYSVM+DIL RF+E+ K M+LY++MV KPD LYEVM++ L KEN+
Sbjct: 502 PDHLAYSVMLDILLRFNESGKAMKLYQEMVLHSFKPDHALYEVMLRVLGKENREEDVHKV 561
Query: 840 XXXXXXVCGMSPEIISSLLIKGECHEYAAKMLRLAVSQGYEPDSETXXXXXXXXXXSGRS 661
+CGM+ ++I S+L+KGEC ++AA MLRLA+SQG E D E SGR
Sbjct: 562 VKDMEELCGMNSQVICSILVKGECFDHAANMLRLAISQGCELDRENLLSILGSYGSSGRH 621
Query: 660 QEAHALLDTLKGFAPRFDHVITEASILILCKDDQLDAALEEYNKTR-FNVFNGVCSVYES 484
EA LLD L+ + +I EA I++LCK QL AL EY K R F +F G ++YES
Sbjct: 622 LEARELLDFLREHSSGSHQLINEALIIMLCKAHQLGDALREYGKARDFGLFCGSFTMYES 681
Query: 483 LIQSCVGSESFAQGSQIYSDMKYYGVEPSQNLYRSLVHMYCKLGFPETAHHLVDQAESLG 304
L+ C +E FA+ SQI+SDM++YGVEPS +LYRS+V YCK+GFPETAH+L+DQAE G
Sbjct: 682 LLLCCEENELFAEASQIFSDMRFYGVEPSDHLYRSMVVTYCKMGFPETAHYLIDQAEEKG 741
Query: 303 IVFDELSVYVELIETYGELNLCQRAESLVGRLRLNKSSVDRKIWNALIHAYATNGLYEQA 124
++FD++S++ +IE YG+L L Q+AESLVG LR + VDRK+WNALIHAYA +G YE+A
Sbjct: 742 LLFDDVSIHTGVIEAYGKLKLWQKAESLVGSLRQKCTMVDRKVWNALIHAYAASGCYERA 801
Query: 123 RAVFSTMMRDGPSPTLESINGLMQALIVDGRLDELYVVIQE 1
RA+F+TMMRDGPSPT++S+NGLMQALIVDGRLDELYVVIQE
Sbjct: 802 RAIFNTMMRDGPSPTVDSVNGLMQALIVDGRLDELYVVIQE 842
Score = 73.9 bits (180), Expect = 6e-11
Identities = 40/164 (24%), Positives = 85/164 (51%)
Frame = -2
Query: 498 SVYESLIQSCVGSESFAQGSQIYSDMKYYGVEPSQNLYRSLVHMYCKLGFPETAHHLVDQ 319
S++ S+++ G F + Q+Y ++ G++P ++ Y +L+ MYC+ PE L+ +
Sbjct: 923 SIWNSVLKLYTGIGDFKKTGQVYQLIQEAGLKPDEDTYNTLILMYCRDRRPEEGLSLMHE 982
Query: 318 AESLGIVFDELSVYVELIETYGELNLCQRAESLVGRLRLNKSSVDRKIWNALIHAYATNG 139
+G+ +L Y LI +G+L + ++AE L L + +DR ++ ++ + +G
Sbjct: 983 MRRVGLE-PKLDTYKSLISAFGKLQMVEQAEELFEGLLSKECKLDRSFYHIMMKMFRNSG 1041
Query: 138 LYEQARAVFSTMMRDGPSPTLESINGLMQALIVDGRLDELYVVI 7
+ +A + M G PT+ +++ LM + G+ +E V+
Sbjct: 1042 NHSKAEKLLGVMKEAGVEPTIATMHLLMVSYSGSGQPEEAEKVL 1085
>emb|CAN76112.1| hypothetical protein VITISV_005527 [Vitis vinifera]
Length = 1494
Score = 384 bits (985), Expect = e-104
Identities = 195/341 (57%), Positives = 250/341 (73%), Gaps = 1/341 (0%)
Frame = -2
Query: 1020 PDHLAYSVMMDILFRFSETKKGMELYEQMVRDGSKPDQGLYEVMVQALMKENKXXXXXXX 841
PDHLAYSVM+DIL RF+E+ K M+LY++MV KPD LYEVM++ L KEN+
Sbjct: 534 PDHLAYSVMLDILLRFNESGKAMKLYQEMVLHSFKPDHALYEVMLRVLGKENREEDVHKV 593
Query: 840 XXXXXXVCGMSPEIISSLLIKGECHEYAAKMLRLAVSQGYEPDSETXXXXXXXXXXSGRS 661
+CGM+ ++I S+L+KGEC ++AA MLRLA+SQG E D E SGR
Sbjct: 594 VKDMEELCGMNSQVICSILVKGECFDHAANMLRLAISQGCELDRENLLSILGSYGSSGRH 653
Query: 660 QEAHALLDTLKGFAPRFDHVITEASILILCKDDQLDAALEEYNKTR-FNVFNGVCSVYES 484
EA LLD L+ + +I EA I++LCK QL AL EY K R F +F G ++YES
Sbjct: 654 LEARELLDFLREHSSGSHQLINEALIIMLCKAHQLGDALREYGKARDFGLFCGSFTMYES 713
Query: 483 LIQSCVGSESFAQGSQIYSDMKYYGVEPSQNLYRSLVHMYCKLGFPETAHHLVDQAESLG 304
L+ C +E FA+ SQI+SDM++YGVEPS +LYRS+V YCK+GFPETAH+L+DQAE G
Sbjct: 714 LLLCCEENELFAEASQIFSDMRFYGVEPSDHLYRSMVVTYCKMGFPETAHYLIDQAEEKG 773
Query: 303 IVFDELSVYVELIETYGELNLCQRAESLVGRLRLNKSSVDRKIWNALIHAYATNGLYEQA 124
++FD++S++ +IE YG+L L Q+AESLVG LR + VDRK+WNALIHAYA +G YE+A
Sbjct: 774 LLFDDVSIHTGVIEAYGKLKLWQKAESLVGSLRQKCTMVDRKVWNALIHAYAASGCYERA 833
Query: 123 RAVFSTMMRDGPSPTLESINGLMQALIVDGRLDELYVVIQE 1
RA+F+TMMRDGPSPT++S+NGLMQALIVDGRLDELYVVIQE
Sbjct: 834 RAIFNTMMRDGPSPTVDSVNGLMQALIVDGRLDELYVVIQE 874
Score = 73.9 bits (180), Expect = 6e-11
Identities = 40/164 (24%), Positives = 85/164 (51%)
Frame = -2
Query: 498 SVYESLIQSCVGSESFAQGSQIYSDMKYYGVEPSQNLYRSLVHMYCKLGFPETAHHLVDQ 319
S++ S+++ G F + Q+Y ++ G++P ++ Y +L+ MYC+ PE L+ +
Sbjct: 955 SIWNSVLKLYTGIGDFKKTGQVYQLIQEAGLKPDEDTYNTLILMYCRDRRPEEGLSLMHE 1014
Query: 318 AESLGIVFDELSVYVELIETYGELNLCQRAESLVGRLRLNKSSVDRKIWNALIHAYATNG 139
+G+ +L Y LI +G+L + ++AE L L + +DR ++ ++ + +G
Sbjct: 1015 MRRVGLE-PKLDTYKSLISAFGKLQMVEQAEELFEGLLSKECKLDRSFYHIMMKMFRNSG 1073
Query: 138 LYEQARAVFSTMMRDGPSPTLESINGLMQALIVDGRLDELYVVI 7
+ +A + M G PT+ +++ LM + G+ +E V+
Sbjct: 1074 NHSKAEKLLGVMKEAGVEPTIATMHLLMVSYSGSGQPEEAEKVL 1117
>ref|XP_002519997.1| pentatricopeptide repeat-containing protein, putative [Ricinus
communis] gi|223540761|gb|EEF42321.1| pentatricopeptide
repeat-containing protein, putative [Ricinus communis]
Length = 1429
Score = 379 bits (972), Expect = e-103
Identities = 198/341 (58%), Positives = 249/341 (73%), Gaps = 1/341 (0%)
Frame = -2
Query: 1020 PDHLAYSVMMDILFRFSETKKGMELYEQMVRDGSKPDQGLYEVMVQALMKENKXXXXXXX 841
PD LAYSVM+D+ RF E K M LY +MVRDG PD +Y M++ L +ENK
Sbjct: 490 PDQLAYSVMLDVFLRFDEATKAMMLYREMVRDGITPDPTVYGAMLRNLGRENKVEDIQRI 549
Query: 840 XXXXXXVCGMSPEIISSLLIKGECHEYAAKMLRLAVSQGYEPDSETXXXXXXXXXXSGRS 661
VCGM+P+ I+S+L+KGEC+E AA MLRLA+S E DSE SGR
Sbjct: 550 IRDMEEVCGMNPQAIASILVKGECYEDAAGMLRLAISGSDEIDSENLLSILSSYSSSGRQ 609
Query: 660 QEAHALLDTLKGFAPRFDHVITEASILILCKDDQLDAALEEYNKTR-FNVFNGVCSVYES 484
EA LL LKG + + ++ EASI+ LCK QLDAAL+EYN TR F+ F G C++YES
Sbjct: 610 AEALDLLQFLKGHVSKSNQLVAEASIVTLCKAKQLDAALKEYNDTREFDWFTGSCTMYES 669
Query: 483 LIQSCVGSESFAQGSQIYSDMKYYGVEPSQNLYRSLVHMYCKLGFPETAHHLVDQAESLG 304
LIQ C +E A+ SQI+SDM++ GV+PS++LYRS+V MYCK+GFPETAH+L+D AE G
Sbjct: 670 LIQCCEENEFTAEASQIFSDMRFNGVKPSKSLYRSMVLMYCKMGFPETAHYLIDLAEIEG 729
Query: 303 IVFDELSVYVELIETYGELNLCQRAESLVGRLRLNKSSVDRKIWNALIHAYATNGLYEQA 124
+ FD++S+ V +IETYG+L L Q+AESLVG LR ++VDRK+WNALI AYA +G YEQA
Sbjct: 730 MPFDKISIDVAVIETYGKLKLWQKAESLVGNLRQRCTNVDRKVWNALIQAYAASGCYEQA 789
Query: 123 RAVFSTMMRDGPSPTLESINGLMQALIVDGRLDELYVVIQE 1
RAVF+TMMRDGPSPT++SINGL+QALIVDGRL+ELYVV QE
Sbjct: 790 RAVFNTMMRDGPSPTVDSINGLLQALIVDGRLEELYVVTQE 830
Score = 76.3 bits (186), Expect = 1e-11
Identities = 49/191 (25%), Positives = 91/191 (47%)
Frame = -2
Query: 579 ILCKDDQLDAALEEYNKTRFNVFNGVCSVYESLIQSCVGSESFAQGSQIYSDMKYYGVEP 400
+LCK ++ + F S++ S+++ G + F + QIY +K G++P
Sbjct: 884 LLCKGKRVRDVEAMVTEMEEAGFRPDLSIWNSMLRLYTGIDDFRKTVQIYQRIKEDGLQP 943
Query: 399 SQNLYRSLVHMYCKLGFPETAHHLVDQAESLGIVFDELSVYVELIETYGELNLCQRAESL 220
++ Y +L+ MYC+ PE L+ + +G+ +L Y LI +G+ L AE L
Sbjct: 944 DEDTYNTLIVMYCRDHRPEEGCSLMHEMRRIGLE-PKLDTYKSLIAAFGKQQLVVDAEEL 1002
Query: 219 VGRLRLNKSSVDRKIWNALIHAYATNGLYEQARAVFSTMMRDGPSPTLESINGLMQALIV 40
L S +DR ++ ++ Y +G + +A + S M G PT+ +++ LM +
Sbjct: 1003 FEELLSKGSKLDRSFYHIMMKIYRNSGNHSKAEKLLSMMKDAGVEPTIATMHLLMVSYGS 1062
Query: 39 DGRLDELYVVI 7
G+ E V+
Sbjct: 1063 SGQPQEAEKVL 1073
>ref|XP_002309826.1| predicted protein [Populus trichocarpa] gi|222852729|gb|EEE90276.1|
predicted protein [Populus trichocarpa]
Length = 1480
Score = 365 bits (936), Expect = 1e-98
Identities = 183/340 (53%), Positives = 245/340 (72%)
Frame = -2
Query: 1020 PDHLAYSVMMDILFRFSETKKGMELYEQMVRDGSKPDQGLYEVMVQALMKENKXXXXXXX 841
PDHLAYSVM+DI RF+E K+ M LY++M+ DG D LYE+M++ L K NK
Sbjct: 534 PDHLAYSVMLDIHLRFNEPKRAMTLYKEMLHDGITLDHSLYELMLRTLRKVNKVEDIGRV 593
Query: 840 XXXXXXVCGMSPEIISSLLIKGECHEYAAKMLRLAVSQGYEPDSETXXXXXXXXXXSGRS 661
+CGM+ + ISS+L+KGEC++ AAKMLR A+S +E D E SGR
Sbjct: 594 IRDMEEICGMNTQTISSILVKGECYDEAAKMLRRAISDHFEIDRENLLSILSSYSSSGRH 653
Query: 660 QEAHALLDTLKGFAPRFDHVITEASILILCKDDQLDAALEEYNKTRFNVFNGVCSVYESL 481
EA LL+ LK +PR +ITEA +++LCK QLDAAL+EY+ R F G +++ESL
Sbjct: 654 AEALDLLEFLKEHSPRSSQMITEALVVMLCKAQQLDAALKEYSNNRELGFTGSFTMFESL 713
Query: 480 IQSCVGSESFAQGSQIYSDMKYYGVEPSQNLYRSLVHMYCKLGFPETAHHLVDQAESLGI 301
IQ C+ +E + SQ++SDM++ G++ S++LY S+V +YCK+GFPETAHHL+D AES GI
Sbjct: 714 IQCCLENELITEASQVFSDMRFCGIKASESLYESMVLLYCKMGFPETAHHLIDFAESDGI 773
Query: 300 VFDELSVYVELIETYGELNLCQRAESLVGRLRLNKSSVDRKIWNALIHAYATNGLYEQAR 121
+ + +S+YV +IE YG L L Q+AES+ G LR +VDRK+WNALI AYA +G YE+AR
Sbjct: 774 LLNNISLYVNVIEAYGRLKLWQKAESVAGNLRQRCITVDRKVWNALIEAYAASGCYERAR 833
Query: 120 AVFSTMMRDGPSPTLESINGLMQALIVDGRLDELYVVIQE 1
A+F+TMMRDGPSPT+++INGL+QALIVDGRLDELYVV+QE
Sbjct: 834 AIFNTMMRDGPSPTVDTINGLLQALIVDGRLDELYVVVQE 873
Score = 81.3 bits (199), Expect = 4e-13
Identities = 45/164 (27%), Positives = 86/164 (52%)
Frame = -2
Query: 498 SVYESLIQSCVGSESFAQGSQIYSDMKYYGVEPSQNLYRSLVHMYCKLGFPETAHHLVDQ 319
S++ S+++ V E F + Q+Y +K G+EP ++ Y +L+ MYC+ PE L+ +
Sbjct: 954 SIWNSVLKMYVAIEDFRKTIQVYQRIKEDGLEPDEDTYNTLIVMYCRDHRPEEGFSLMHE 1013
Query: 318 AESLGIVFDELSVYVELIETYGELNLCQRAESLVGRLRLNKSSVDRKIWNALIHAYATNG 139
G+ +L Y L+ ++G+ L ++AE L L+ +DR ++ ++ Y +G
Sbjct: 1014 MRVAGLE-PKLDTYKSLVASFGKQQLVEQAEELFEELQSKGCKLDRSFYHTMMKIYRNSG 1072
Query: 138 LYEQARAVFSTMMRDGPSPTLESINGLMQALIVDGRLDELYVVI 7
+ +A +FS M G PT+ +++ LM + G+ E V+
Sbjct: 1073 SHSKAERLFSMMKDAGVEPTIATMHLLMVSYGSSGQPQEAEKVL 1116
>ref|XP_003538665.1| PREDICTED: pentatricopeptide repeat-containing protein At3g18110,
chloroplastic-like [Glycine max]
Length = 1476
Score = 360 bits (923), Expect = 4e-97
Identities = 185/342 (54%), Positives = 246/342 (71%), Gaps = 2/342 (0%)
Frame = -2
Query: 1020 PDHLAYSVMMDILFRFSETKKGMELYEQMVRDGSKPDQGLYEVMVQALMKENKXXXXXXX 841
PD LAYSVM+D RF+E KK M LY +M+R+G PD GLYEVM+ AL++EN
Sbjct: 529 PDRLAYSVMLDFFLRFNEMKKAMGLYHEMIREGFTPDNGLYEVMMHALVRENMWDVVDRI 588
Query: 840 XXXXXXVCGMSPEIISSLLIKGECHEYAAKMLRLAVSQGYEPDSETXXXXXXXXXXSGRS 661
+ GM+P++ISS+L+KG C+++AAKML++A+S GYE D E S R
Sbjct: 589 IRDMEELSGMNPQVISSVLVKGGCYDHAAKMLKVAISNGYELDHEIFLSIMSSYSSSARY 648
Query: 660 QEAHALLDTLKGFAPRFDHVITEASILILCKDDQLDAALEEY-NKTRFNVFNGVCSVYES 484
EA LL+ + AP +ITEA I+ILCK +LDAALEEY +K F C++YES
Sbjct: 649 SEACELLEFSREHAPNDIQMITEALIIILCKAKKLDAALEEYRSKGELGQFRS-CTMYES 707
Query: 483 LIQSCVGSESFAQGSQIYSDMKYYGVEPSQNLYRSLVHMYCKLGFPETAHHLVDQAESLG 304
LIQ C+ +E F SQI+SDM++ GVE S+ LY+ +V +YC++ PETAHHL+ AE G
Sbjct: 708 LIQECIQNELFDVASQIFSDMRFNGVESSECLYQGMVSVYCRMDLPETAHHLLYHAEKNG 767
Query: 303 IVFD-ELSVYVELIETYGELNLCQRAESLVGRLRLNKSSVDRKIWNALIHAYATNGLYEQ 127
I+ D ++SVY++++ETYG+L + Q+AESLVG LR S +DRK+WNALIHAYA +G YE+
Sbjct: 768 IILDNDISVYIDIVETYGKLKIWQKAESLVGSLRQRCSKMDRKVWNALIHAYAFSGCYER 827
Query: 126 ARAVFSTMMRDGPSPTLESINGLMQALIVDGRLDELYVVIQE 1
ARA+F+TMMRDGPSPT++S+NGL+QALIVD RL+ELYVVIQE
Sbjct: 828 ARAIFNTMMRDGPSPTVDSVNGLLQALIVDRRLNELYVVIQE 869
Score = 75.5 bits (184), Expect = 2e-11
Identities = 50/195 (25%), Positives = 98/195 (50%), Gaps = 3/195 (1%)
Frame = -2
Query: 579 ILCKDDQL---DAALEEYNKTRFNVFNGVCSVYESLIQSCVGSESFAQGSQIYSDMKYYG 409
+LCK ++ + L E + F +C+ S+++ +G E F IY ++
Sbjct: 923 LLCKCKRVRDVETMLCEMEEAGFQPDLQICN---SILKLYLGIEDFKSMGIIYQKIQDAS 979
Query: 408 VEPSQNLYRSLVHMYCKLGFPETAHHLVDQAESLGIVFDELSVYVELIETYGELNLCQRA 229
++P + Y +L+ MYC+ PE L+++ SLG+ +L Y LI + + + ++A
Sbjct: 980 LKPDEETYNTLIIMYCRDRRPEEGFSLMNKMRSLGLE-PKLDTYRSLITAFNKQRMYEQA 1038
Query: 228 ESLVGRLRLNKSSVDRKIWNALIHAYATNGLYEQARAVFSTMMRDGPSPTLESINGLMQA 49
E L LR N +DR ++ ++ Y T+G + +A + + M G PT+ +++ LM +
Sbjct: 1039 EELFEELRSNGYKLDRAFYHLMMKTYRTSGDHRKAENLLAIMKESGIEPTISTMHLLMVS 1098
Query: 48 LIVDGRLDELYVVIQ 4
G+ +E V++
Sbjct: 1099 YGKSGQPEEAENVLK 1113
Score = 59.7 bits (143), Expect = 1e-06
Identities = 64/334 (19%), Positives = 139/334 (41%), Gaps = 8/334 (2%)
Frame = -2
Query: 1020 PDHLAYSVMMDILFRFS--ETKKGMELYEQMVRDGSKPDQGLYEVMVQALMKE-NKXXXX 850
PD ++++ +++ + E ++L ++ R G +PD Y ++ A +E N
Sbjct: 282 PDLVSFNTLINARMKSGAMEPNLALQLLNEVRRSGIRPDIITYNTLISACSRESNLEEAV 341
Query: 849 XXXXXXXXXVCGMSPEIISSLL-IKGECHEY--AAKMLRLAVSQGYEPDSETXXXXXXXX 679
C ++++ + G C A ++ + S+G+ PD+ T
Sbjct: 342 AVFSDMESHRCQPDLWTYNAMISVYGRCARARKAEELFKELESKGFFPDAVTYNSLLYAF 401
Query: 678 XXSGRSQEAHALLDTL--KGFAPRFDHVITEASILILCKDDQLDAALEEYNKTRFNVFNG 505
G +++ + + + +GF D + I + K + D A++ Y + + N
Sbjct: 402 SREGNTEKVRDICEEMVKRGFGQ--DEMTYNTIIHMYGKQGRHDQAMQIYRDMKSSGRNP 459
Query: 504 VCSVYESLIQSCVGSESFAQGSQIYSDMKYYGVEPSQNLYRSLVHMYCKLGFPETAHHLV 325
Y LI S + + + + S+M GV+P+ + Y +L+ Y K G E A
Sbjct: 460 DAVTYTVLIDSLGKASKVEEAANVMSEMLDAGVKPTLHTYSALICAYAKAGKREEAEETF 519
Query: 324 DQAESLGIVFDELSVYVELIETYGELNLCQRAESLVGRLRLNKSSVDRKIWNALIHAYAT 145
+ GI D L+ Y +++ + N ++A L + + D ++ ++HA
Sbjct: 520 NCMRRSGIKPDRLA-YSVMLDFFLRFNEMKKAMGLYHEMIREGFTPDNGLYEVMMHALVR 578
Query: 144 NGLYEQARAVFSTMMRDGPSPTLESINGLMQALI 43
+++ V ++RD +E ++G+ +I
Sbjct: 579 ENMWD----VVDRIIRD-----MEELSGMNPQVI 603