BLASTX nr result

ID: Papaver23_contig00029888 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Papaver23_contig00029888
         (542 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002530663.1| retinoblastoma-binding protein, putative [Ri...    94   1e-17
ref|XP_003608693.1| Retinoblastoma-binding protein [Medicago tru...    86   3e-15
ref|XP_002304286.1| predicted protein [Populus trichocarpa] gi|2...    82   4e-14
ref|XP_003549919.1| PREDICTED: uncharacterized protein LOC100808...    78   8e-13
ref|XP_003525885.1| PREDICTED: uncharacterized protein LOC100798...    78   1e-12

>ref|XP_002530663.1| retinoblastoma-binding protein, putative [Ricinus communis]
            gi|223529796|gb|EEF31732.1| retinoblastoma-binding
            protein, putative [Ricinus communis]
          Length = 868

 Score = 94.4 bits (233), Expect = 1e-17
 Identities = 53/150 (35%), Positives = 76/150 (50%), Gaps = 10/150 (6%)
 Frame = -3

Query: 453  PLRRDLSVSGMGLKPNPGFLSREESEARKADLRKKRENEMRDERAYINNEEFNREATNRA 274
            P +RDL+  GMG+   P  +SREE EARKADLR++RENE R ER +  + EF RE ++  
Sbjct: 570  PPQRDLADFGMGMNAGPPAMSREEFEARKADLRRRRENERRAEREFPRDREFGREVSSGV 629

Query: 273  EVSSTKSRLVQRQSMQDEKMVDHRPRHHNDGPER----------SSSRPQKRSKVIPDHD 124
            ++SS KS+ + + S   +    HR R     PER             RP KR     D D
Sbjct: 630  DISSMKSKPIPQPSRSGDPHPHHRHRSERSSPERPVRDLEPPAPPPPRPSKRKADHHDRD 689

Query: 123  ELSEDDDRNFKRKRSSKEMNQYHERDYEHR 34
               + D  + + +   +E +  H   + HR
Sbjct: 690  RDRDYDHHDDRERERERERHHRHHHQHHHR 719


>ref|XP_003608693.1| Retinoblastoma-binding protein [Medicago truncatula]
            gi|355509748|gb|AES90890.1| Retinoblastoma-binding
            protein [Medicago truncatula]
          Length = 908

 Score = 86.3 bits (212), Expect = 3e-15
 Identities = 55/151 (36%), Positives = 80/151 (52%), Gaps = 6/151 (3%)
 Frame = -3

Query: 453  PLRRDLSVSGMGLKPNPGFLSREESEARKADLRKKRENEMRDERAYINNEEFNREATNRA 274
            P  RDL+   MG+   P  +SREE EARKAD R+KRENE R ER +  + +F RE ++  
Sbjct: 587  PPHRDLAEFSMGMNVPPPAMSREEFEARKADARRKRENERRVERDFSKDRDFGREVSSVG 646

Query: 273  EVSSTKSRL--VQRQSMQDEKMVDHRPRHHNDGPERSSS----RPQKRSKVIPDHDELSE 112
            +VSS KS+   +   S  D     H+ RH ++ P   SS     P + +K   DH E   
Sbjct: 647  DVSSIKSKTKPIPPSSASDY----HQNRHRSERPSPDSSHREVEPPRPTKRKSDHSERER 702

Query: 111  DDDRNFKRKRSSKEMNQYHERDYEHRDYERK 19
            +D     R R     +++ +RDYEH  ++ +
Sbjct: 703  ED-----RDRDYDYHDRHQDRDYEHDRHQHR 728


>ref|XP_002304286.1| predicted protein [Populus trichocarpa] gi|222841718|gb|EEE79265.1|
           predicted protein [Populus trichocarpa]
          Length = 537

 Score = 82.4 bits (202), Expect = 4e-14
 Identities = 51/147 (34%), Positives = 76/147 (51%), Gaps = 7/147 (4%)
 Frame = -3

Query: 459 SAPLRRDLSVSGMGLKPNPGFLSREESEARKADLRKKRENEMRDERAYINNEEFNREATN 280
           + P +RDL+  GM +   P  +SREE EARKAD+R++RENE R ER +  + +  RE + 
Sbjct: 246 AVPPQRDLAEFGMNMNLRPPLMSREEFEARKADVRRRRENERRAEREFSRDWDPGREVSG 305

Query: 279 RAEVSSTKSRLVQRQSMQDEKMVDHRPRHHNDGPERSS-------SRPQKRSKVIPDHDE 121
             +VSS KS+ + + S   +    +R R     PERS+        RP KR     +H +
Sbjct: 306 GGDVSSMKSKSIPQSSASGDPH-HNRRRSERLSPERSAREIDPLPPRPSKRKSDRHEHGD 364

Query: 120 LSEDDDRNFKRKRSSKEMNQYHERDYE 40
              DD    +R RS ++   +H    E
Sbjct: 365 RDADDFDYHERDRSDRDHRHHHRHRSE 391


>ref|XP_003549919.1| PREDICTED: uncharacterized protein LOC100808703 [Glycine max]
          Length = 849

 Score = 78.2 bits (191), Expect = 8e-13
 Identities = 57/159 (35%), Positives = 82/159 (51%), Gaps = 11/159 (6%)
 Frame = -3

Query: 453  PLRRDLSVSGMGLKPNPGFLSREESEARKADLRKKRENEMRDERAYINNEEFNREATNRA 274
            P  RDL+   MG+   P  +SREE EARKAD+R+KREN+ R ER +  + +F RE ++  
Sbjct: 569  PPHRDLADFSMGMNVPPPVMSREEFEARKADMRRKRENDRRPERDFSKDRDFGREVSSVG 628

Query: 273  EVSSTKS--RLVQRQSMQDEKMVDHRPRHHND--GPERS-------SSRPQKRSKVIPDH 127
            +VSS KS  R +   S  D     H+PR  ++   P+RS         RP KR K+    
Sbjct: 629  DVSSMKSKTRSIPPSSGSDY----HQPRFRSERHSPDRSPRDVEPPPPRPTKR-KLEHHS 683

Query: 126  DELSEDDDRNFKRKRSSKEMNQYHERDYEHRDYERKMSK 10
            D   ED DR+++ +R        H R +      R+ S+
Sbjct: 684  DREREDRDRDYEHER--------HHRRHRSESSSRRSSE 714


>ref|XP_003525885.1| PREDICTED: uncharacterized protein LOC100798536 [Glycine max]
          Length = 845

 Score = 77.8 bits (190), Expect = 1e-12
 Identities = 52/149 (34%), Positives = 73/149 (48%), Gaps = 2/149 (1%)
 Frame = -3

Query: 453 PLRRDLSVSGMGLKPNPGFLSREESEARKADLRKKRENEMRDERAYINNEEFNREATNRA 274
           P  RDL+   MG+      +SREE EARKAD+R+KREN+ R ER +  + +F RE ++  
Sbjct: 565 PPHRDLADFSMGMNAPAPVMSREEFEARKADMRRKRENDRRPERDFSKDRDFGREVSSVG 624

Query: 273 EVSSTKS--RLVQRQSMQDEKMVDHRPRHHNDGPERSSSRPQKRSKVIPDHDELSEDDDR 100
           +VSS KS  R +   S  D     H PR  +   ER S     R    P         D 
Sbjct: 625 DVSSMKSKTRSIPPSSGSDY----HHPRFRS---ERHSPDRSPREVEPPPPRPTKRKSDH 677

Query: 99  NFKRKRSSKEMNQYHERDYEHRDYERKMS 13
           N  R+R  ++ +  HER + +R    + S
Sbjct: 678 NSDREREDRDRDYEHERHHHNRHQRSESS 706


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