BLASTX nr result

ID: Papaver23_contig00029875 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Papaver23_contig00029875
         (451 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002524579.1| ubiquitin-protein ligase, putative [Ricinus ...    67   2e-09
ref|NP_566312.1| F-box/LRR-repeat protein 12 [Arabidopsis thalia...    65   4e-09
ref|XP_003528813.1| PREDICTED: F-box/LRR-repeat protein 12-like ...    64   1e-08
ref|XP_002882535.1| F-box family protein [Arabidopsis lyrata sub...    64   2e-08
ref|XP_002323784.1| predicted protein [Populus trichocarpa] gi|2...    64   2e-08

>ref|XP_002524579.1| ubiquitin-protein ligase, putative [Ricinus communis]
           gi|223536132|gb|EEF37787.1| ubiquitin-protein ligase,
           putative [Ricinus communis]
          Length = 389

 Score = 66.6 bits (161), Expect = 2e-09
 Identities = 33/93 (35%), Positives = 49/93 (52%)
 Frame = -3

Query: 413 VVQGCPSLTYLDLSHTRIDDQGLSLFGAAVTPLQTVILGSCAQVTDIGIQNLLMGCPTIR 234
           +  GCP LT + L    I D GL       + L+ + L  C  V+D G++++   C  ++
Sbjct: 135 ITSGCPYLTVISLYRCNITDIGLETLANGCSALKQINLSYCPLVSDCGLRSISQACCQLQ 194

Query: 233 KIDISCSLGIMGVGFGGVAAQLEHIVADSCRLD 135
            + ISC   I GVGF G +  L +I A+SC LD
Sbjct: 195 AVKISCCREISGVGFTGCSPTLAYIDAESCNLD 227


>ref|NP_566312.1| F-box/LRR-repeat protein 12 [Arabidopsis thaliana]
           gi|30680350|ref|NP_850534.1| F-box/LRR-repeat protein 12
           [Arabidopsis thaliana]
           gi|75207381|sp|Q9SRR1.1|FBL12_ARATH RecName:
           Full=F-box/LRR-repeat protein 12
           gi|6041850|gb|AAF02159.1|AC009853_19 unknown protein
           [Arabidopsis thaliana] gi|26452863|dbj|BAC43510.1|
           unknown protein [Arabidopsis thaliana]
           gi|30793809|gb|AAP40357.1| putative F-box protein
           family, AtFBL12 [Arabidopsis thaliana]
           gi|332641038|gb|AEE74559.1| F-box/LRR-repeat protein 12
           [Arabidopsis thaliana] gi|332641039|gb|AEE74560.1|
           F-box/LRR-repeat protein 12 [Arabidopsis thaliana]
          Length = 395

 Score = 65.5 bits (158), Expect = 4e-09
 Identities = 39/104 (37%), Positives = 52/104 (50%)
 Frame = -3

Query: 446 DGCSEIVSFHPVVQGCPSLTYLDLSHTRIDDQGLSLFGAAVTPLQTVILGSCAQVTDIGI 267
           DG S I SF      CP+L+ + L    I D GL     A   L+ V L  C  V+D GI
Sbjct: 133 DGISTIASF------CPNLSVVSLYRCNISDIGLETLARASLSLKCVNLSYCPLVSDFGI 186

Query: 266 QNLLMGCPTIRKIDISCSLGIMGVGFGGVAAQLEHIVADSCRLD 135
           + L   C  +  + IS    I GVGF G +  L ++ ADSC+L+
Sbjct: 187 KALSQACLQLESVKISNCKSITGVGFSGCSPTLGYVDADSCQLE 230


>ref|XP_003528813.1| PREDICTED: F-box/LRR-repeat protein 12-like [Glycine max]
          Length = 388

 Score = 63.9 bits (154), Expect = 1e-08
 Identities = 37/110 (33%), Positives = 60/110 (54%), Gaps = 3/110 (2%)
 Frame = -3

Query: 449 LDGCSEIVSF--HPVVQGCPSLTYLDLSHTR-IDDQGLSLFGAAVTPLQTVILGSCAQVT 279
           LD C ++  +    V  GCPSL  + L     I D+GL    +A   ++ V L  C+Q++
Sbjct: 121 LDCCLKVTDYGLSLVASGCPSLMSISLYRCPGITDKGLDTLASACLSMKYVNLSYCSQIS 180

Query: 278 DIGIQNLLMGCPTIRKIDISCSLGIMGVGFGGVAAQLEHIVADSCRLDTE 129
           D G++ +   C  ++ I+IS   G+ GVGF G +  L ++ A+SC+L  E
Sbjct: 181 DNGLKAITHWCRQLQAINISHCEGLSGVGFEGCSKTLAYVEAESCKLKQE 230


>ref|XP_002882535.1| F-box family protein [Arabidopsis lyrata subsp. lyrata]
           gi|297328375|gb|EFH58794.1| F-box family protein
           [Arabidopsis lyrata subsp. lyrata]
          Length = 394

 Score = 63.5 bits (153), Expect = 2e-08
 Identities = 37/104 (35%), Positives = 52/104 (50%)
 Frame = -3

Query: 446 DGCSEIVSFHPVVQGCPSLTYLDLSHTRIDDQGLSLFGAAVTPLQTVILGSCAQVTDIGI 267
           DG S I SF      CP+L  + L    I D GL     A   L+ V L  C  V+D+GI
Sbjct: 132 DGISTIASF------CPNLRVVSLYRCNISDIGLETLARASLSLKCVNLSYCPLVSDLGI 185

Query: 266 QNLLMGCPTIRKIDISCSLGIMGVGFGGVAAQLEHIVADSCRLD 135
           + L   C  +  + +S    I GVGF G +  L ++ A+SC+L+
Sbjct: 186 KALSQACLQLESVKVSNCKSITGVGFNGCSPTLGYVDAESCQLE 229


>ref|XP_002323784.1| predicted protein [Populus trichocarpa] gi|222866786|gb|EEF03917.1|
           predicted protein [Populus trichocarpa]
          Length = 374

 Score = 63.5 bits (153), Expect = 2e-08
 Identities = 35/95 (36%), Positives = 47/95 (49%)
 Frame = -3

Query: 413 VVQGCPSLTYLDLSHTRIDDQGLSLFGAAVTPLQTVILGSCAQVTDIGIQNLLMGCPTIR 234
           V  GC SL  + L    I D GL       + L+ + L  C+ V+D G++ L   C  + 
Sbjct: 123 VAAGCSSLEAISLYRCNITDAGLETLANGCSALKHINLSYCSLVSDGGLRALSQSCCHLE 182

Query: 233 KIDISCSLGIMGVGFGGVAAQLEHIVADSCRLDTE 129
            + IS   G+ G GF G +  L HI ADSC LD E
Sbjct: 183 AVKISHCSGVNGTGFKGCSPTLTHIDADSCNLDPE 217


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