BLASTX nr result

ID: Papaver23_contig00029855 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Papaver23_contig00029855
         (419 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_004137960.1| PREDICTED: LOW QUALITY PROTEIN: E3 ubiquitin...    43   4e-08
ref|XP_004170016.1| PREDICTED: LOW QUALITY PROTEIN: E3 ubiquitin...    43   4e-08
ref|XP_002525185.1| ubiquitin protein ligase E3a, putative [Rici...    40   9e-07
ref|XP_003541402.1| PREDICTED: E3 ubiquitin-protein ligase UPL4-...    39   3e-06
ref|XP_002273203.2| PREDICTED: E3 ubiquitin-protein ligase UPL4-...    41   4e-06

>ref|XP_004137960.1| PREDICTED: LOW QUALITY PROTEIN: E3 ubiquitin-protein ligase UPL4-like
            [Cucumis sativus]
          Length = 1508

 Score = 42.7 bits (99), Expect(2) = 4e-08
 Identities = 24/77 (31%), Positives = 43/77 (55%)
 Frame = -2

Query: 232  EVKESSTYNCLVGTQISIQGNFIRISCVSLVC*LLYNLEKLDPVYEIVLPLKILEVINK* 53
            EV++S+       +  +++  F    C  L C L  +L K  P Y+++  L+ +E +N+ 
Sbjct: 932  EVEDSTCNQLFCASDKALKLQFSSFFCDILDCVLPSDLAKGSPAYDVLFLLRSIEGMNR- 990

Query: 52   TCTSLMSHERVKAFAEG 2
                +MSHER++AFA+G
Sbjct: 991  MAFHIMSHERIRAFADG 1007



 Score = 39.3 bits (90), Expect(2) = 4e-08
 Identities = 17/45 (37%), Positives = 31/45 (68%)
 Frame = -3

Query: 363  DGRELDSKLTLYQAIL*QVKEENDMIAGKIFWA*VYRVTFKKAAK 229
            +G++L+  L++YQAIL Q  +EN+ I+G   W+ VY + ++ A +
Sbjct: 888  EGKQLEPTLSIYQAILQQHIKENETISGIKIWSQVYTIMYRSAGE 932


>ref|XP_004170016.1| PREDICTED: LOW QUALITY PROTEIN: E3 ubiquitin-protein ligase
            UPL4-like, partial [Cucumis sativus]
          Length = 1456

 Score = 42.7 bits (99), Expect(2) = 4e-08
 Identities = 24/77 (31%), Positives = 43/77 (55%)
 Frame = -2

Query: 232  EVKESSTYNCLVGTQISIQGNFIRISCVSLVC*LLYNLEKLDPVYEIVLPLKILEVINK* 53
            EV++S+       +  +++  F    C  L C L  +L K  P Y+++  L+ +E +N+ 
Sbjct: 930  EVEDSTCNQLFCASDKALKLQFSSFFCDILDCVLPSDLAKGSPAYDVLFLLRSIEGMNR- 988

Query: 52   TCTSLMSHERVKAFAEG 2
                +MSHER++AFA+G
Sbjct: 989  MAFHIMSHERIRAFADG 1005



 Score = 39.3 bits (90), Expect(2) = 4e-08
 Identities = 17/45 (37%), Positives = 31/45 (68%)
 Frame = -3

Query: 363  DGRELDSKLTLYQAIL*QVKEENDMIAGKIFWA*VYRVTFKKAAK 229
            +G++L+  L++YQAIL Q  +EN+ I+G   W+ VY + ++ A +
Sbjct: 886  EGKQLEPTLSIYQAILQQHIKENETISGIKIWSQVYTIMYRSAGE 930


>ref|XP_002525185.1| ubiquitin protein ligase E3a, putative [Ricinus communis]
            gi|223535482|gb|EEF37151.1| ubiquitin protein ligase E3a,
            putative [Ricinus communis]
          Length = 1561

 Score = 40.4 bits (93), Expect(2) = 9e-07
 Identities = 20/46 (43%), Positives = 32/46 (69%), Gaps = 1/46 (2%)
 Frame = -3

Query: 363  DGRELDSKLTLYQAIL*Q-VKEENDMIAGKIFWA*VYRVTFKKAAK 229
            +G+ELD  LTLYQAI+ Q +K ++++  G   W  VY +T++ AA+
Sbjct: 939  EGKELDRTLTLYQAIIQQKIKADHEINTGAKLWCRVYTLTYRIAAE 984



 Score = 37.0 bits (84), Expect(2) = 9e-07
 Identities = 20/44 (45%), Positives = 28/44 (63%)
 Frame = -2

Query: 133  LLYNLEKLDPVYEIVLPLKILEVINK*TCTSLMSHERVKAFAEG 2
            L  NL+K  P Y+++  LK LE +N+ T   LMS ER+ AF+ G
Sbjct: 1024 LASNLDKSSPTYDVLFMLKSLEGLNRFT-FHLMSRERIHAFSAG 1066


>ref|XP_003541402.1| PREDICTED: E3 ubiquitin-protein ligase UPL4-like [Glycine max]
          Length = 1558

 Score = 38.9 bits (89), Expect(2) = 3e-06
 Identities = 22/46 (47%), Positives = 30/46 (65%)
 Frame = -2

Query: 139  C*LLYNLEKLDPVYEIVLPLKILEVINK*TCTSLMSHERVKAFAEG 2
            C L+ +LEK  P Y+I+  LK LE +N+     LMS ER+ AFA+G
Sbjct: 1014 CELVSDLEKSSPTYDILFLLKSLESMNR-IIFHLMSRERICAFAKG 1058



 Score = 36.6 bits (83), Expect(2) = 3e-06
 Identities = 18/47 (38%), Positives = 30/47 (63%), Gaps = 1/47 (2%)
 Frame = -3

Query: 375  IFS*DGRELDSKLTLYQAIL*Q-VKEENDMIAGKIFWA*VYRVTFKK 238
            +F  +G+ LD KLTLYQAIL   +K+  D  +    W+ V+ +T+++
Sbjct: 928  VFYLEGQRLDPKLTLYQAILRNAIKQNADSFSSAKLWSQVHIITYRR 974


>ref|XP_002273203.2| PREDICTED: E3 ubiquitin-protein ligase UPL4-like [Vitis vinifera]
          Length = 1575

 Score = 40.8 bits (94), Expect(2) = 4e-06
 Identities = 31/77 (40%), Positives = 39/77 (50%)
 Frame = -2

Query: 232  EVKESSTYNCLVGTQISIQGNFIRISCVSLVC*LLYNLEKLDPVYEIVLPLKILEVINK* 53
            E  ++S  +  VGT +     F  I    LV      L+K  P Y+I+  LK LE +NK 
Sbjct: 1002 ECLQNSPVSAKVGTHLQQAPFFSNIFVPELVA----ELDKSGPTYDILFLLKSLEGMNK- 1056

Query: 52   TCTSLMSHERVKAFAEG 2
                LMS ER KAFAEG
Sbjct: 1057 FKFHLMSRERTKAFAEG 1073



 Score = 34.3 bits (77), Expect(2) = 4e-06
 Identities = 16/50 (32%), Positives = 34/50 (68%), Gaps = 1/50 (2%)
 Frame = -3

Query: 375  IFS*DGRELDSKLTLYQAIL-*QVKEENDMIAGKIFWA*VYRVTFKKAAK 229
            +F  +G++L+ +LT+YQAI+  Q++ E+++I     W  V+ +T++ A +
Sbjct: 945  LFYLEGQQLNRELTMYQAIIQQQIEAEHEIIPSGKLWGQVHTLTYRAAVE 994


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