BLASTX nr result

ID: Papaver23_contig00029816 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Papaver23_contig00029816
         (917 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

emb|CCA66036.1| hypothetical protein [Beta vulgaris subsp. vulga...   153   6e-35
gb|AAX95129.1| retrotransposon protein, putative, unclassified [...   146   8e-33
gb|ABA91837.2| retrotransposon protein, putative, unclassified [...   146   8e-33
gb|AAB82639.1| putative non-LTR retroelement reverse transcripta...   143   5e-32
emb|CCA66040.1| hypothetical protein [Beta vulgaris subsp. vulga...   142   1e-31

>emb|CCA66036.1| hypothetical protein [Beta vulgaris subsp. vulgaris]
          Length = 1369

 Score =  153 bits (386), Expect = 6e-35
 Identities = 94/304 (30%), Positives = 140/304 (46%), Gaps = 9/304 (2%)
 Frame = +3

Query: 30  MIAWNCQGLGNLETRSSVLDILNKENPDILFLSETKQQNKEMHKILKHLNVQNYQLVPPR 209
           +++WNC+G+G+    S++  +L  ENP I+FLSETK ++ EM  + K L  ++   V   
Sbjct: 4   ILSWNCRGMGSPSALSALRRLLASENPQIVFLSETKLKSYEMESVKKKLKWEHMVAVDCE 63

Query: 210 GSA----GGLCLXXXXXXXXXXXXXXXXXXNAEVTNHINDCSWTLTCFYGSPYRRMKLHS 377
           G      GGL +                  +  V        W  T  YG P    K  +
Sbjct: 64  GECRKRRGGLAMLWRSEIKVQVMSMSSNHIDIVVGEEAQG-EWRFTGIYGYPEEEHKDKT 122

Query: 378 WKIIEDMAQTINNPWIIIGDLNVVLHEEEKKSRFPFKRNEIRIFNNLINKCGLMDMGFTG 557
             ++  +A+    PW+  GD N++L   EKK    F   E  IF N + +C  MD+GF G
Sbjct: 123 GALLSALARASRRPWLCGGDFNLMLVASEKKGGDGFNSREADIFRNAMEECHFMDLGFVG 182

Query: 558 YTFTWNNNRSDSDNIEQRLDRAVVNSKWNKKFPNSSIRHLGPLASDHVLI-----RLNSY 722
           Y FTW NNR    NI++RLDR V N  W  KFP S + HL    SDHV I        S 
Sbjct: 183 YEFTWTNNRGGDANIQERLDRFVANDLWKIKFPGSFVSHLPKRKSDHVPIVASVKGAQSA 242

Query: 723 NHWNDGAIPFKYSGEWIKHEQCKPLILDCWNSNIQGSPAFTVNKKLANVKYILKLWNKSS 902
                 +  F++   W++  +   ++ + W   ++G+ A      LA     L  W+K  
Sbjct: 243 ATRTKKSKRFRFEAMWLREGESDEVVKETW---MRGTDA---GINLARTANKLLSWSKQK 296

Query: 903 FGNI 914
           FG++
Sbjct: 297 FGHV 300


>gb|AAX95129.1| retrotransposon protein, putative, unclassified [Oryza sativa
            Japonica Group] gi|62733115|gb|AAX95232.1|
            retrotransposon protein, putative, unclassified [Oryza
            sativa Japonica Group]
          Length = 1324

 Score =  146 bits (368), Expect = 8e-33
 Identities = 90/303 (29%), Positives = 145/303 (47%), Gaps = 5/303 (1%)
 Frame = +3

Query: 24   ISMIAWNCQGLGNLETRSSVLDILNKENPDILFLSETKQQNKEMHKILKHLNVQNYQLVP 203
            + +IAWNC+GLGN  T   +L++  +++PDILFLS TK    ++      L + N  +  
Sbjct: 448  MKIIAWNCRGLGNGPTVRGLLNLQKEDDPDILFLSNTKMDTNKLQCFRWKLGMPNLVVKD 507

Query: 204  PRGSAGGLCLXXXXXXXXXXXXXXXXXXNAEVTNHINDCSWTLTCFYGSPYRRMKLHSWK 383
             +G +GGL +                  + +V    +   W  T  YG P    K  +WK
Sbjct: 508  CQGKSGGLAVFWKKEINLRLRTVSRLFMDVDVMED-DGFWWRFTGVYGEPRSDKKDLTWK 566

Query: 384  IIEDMAQTINNPWIIIGDLNVVLHEEEKKSRFPFKRNEIRIFNNLINKCGLMDMGFTGYT 563
             +  +  T    W+ +GD N VL   EK+      ++ +  F   ++ C L ++GFTG  
Sbjct: 567  ALRTLNATKGELWLCVGDFNEVLFSWEKERGHAKAQSCMDRFRQTLDCCSLSNLGFTGDP 626

Query: 564  FTWNNNRSDSDN-IEQRLDRAVVNSKWNKKFPNSSIRHLGPLASDH--VLIRLNSYNHWN 734
            FTW NN    D  I +RLDRAV +S W  +FP+  +R   P  SDH  V++  ++   WN
Sbjct: 627  FTWRNNWCVRDGYIRERLDRAVADSDWCCRFPSFRVRKGDPRHSDHHPVIVTTSNEVIWN 686

Query: 735  DGAIP--FKYSGEWIKHEQCKPLILDCWNSNIQGSPAFTVNKKLANVKYILKLWNKSSFG 908
             G     F++   W + E C P++ + W  ++ G     V   +  V   L  W+K+  G
Sbjct: 687  GGRSKPGFRFEAGWAREEHCAPIVENAWKLSV-GPRGGKVMDAIREVAANLWDWSKNFLG 745

Query: 909  NIQ 917
            +++
Sbjct: 746  DLE 748


>gb|ABA91837.2| retrotransposon protein, putative, unclassified [Oryza sativa
            Japonica Group]
          Length = 1301

 Score =  146 bits (368), Expect = 8e-33
 Identities = 90/303 (29%), Positives = 145/303 (47%), Gaps = 5/303 (1%)
 Frame = +3

Query: 24   ISMIAWNCQGLGNLETRSSVLDILNKENPDILFLSETKQQNKEMHKILKHLNVQNYQLVP 203
            + +IAWNC+GLGN  T   +L++  +++PDILFLS TK    ++      L + N  +  
Sbjct: 425  MKIIAWNCRGLGNGPTVRGLLNLQKEDDPDILFLSNTKMDTNKLQCFRWKLGMPNLVVKD 484

Query: 204  PRGSAGGLCLXXXXXXXXXXXXXXXXXXNAEVTNHINDCSWTLTCFYGSPYRRMKLHSWK 383
             +G +GGL +                  + +V    +   W  T  YG P    K  +WK
Sbjct: 485  CQGKSGGLAVFWKKEINLRLRTVSRLFMDVDVMED-DGFWWRFTGVYGEPRSDKKDLTWK 543

Query: 384  IIEDMAQTINNPWIIIGDLNVVLHEEEKKSRFPFKRNEIRIFNNLINKCGLMDMGFTGYT 563
             +  +  T    W+ +GD N VL   EK+      ++ +  F   ++ C L ++GFTG  
Sbjct: 544  ALRTLNATKGELWLCVGDFNEVLFSWEKERGHAKAQSCMDRFRQTLDCCSLSNLGFTGDP 603

Query: 564  FTWNNNRSDSDN-IEQRLDRAVVNSKWNKKFPNSSIRHLGPLASDH--VLIRLNSYNHWN 734
            FTW NN    D  I +RLDRAV +S W  +FP+  +R   P  SDH  V++  ++   WN
Sbjct: 604  FTWRNNWCVRDGYIRERLDRAVADSDWCCRFPSFRVRKGDPRHSDHHPVIVTTSNEVIWN 663

Query: 735  DGAIP--FKYSGEWIKHEQCKPLILDCWNSNIQGSPAFTVNKKLANVKYILKLWNKSSFG 908
             G     F++   W + E C P++ + W  ++ G     V   +  V   L  W+K+  G
Sbjct: 664  GGRSKPGFRFEAGWAREEHCAPIVENAWKLSV-GPRGGKVMDAIREVAANLWDWSKNFLG 722

Query: 909  NIQ 917
            +++
Sbjct: 723  DLE 725


>gb|AAB82639.1| putative non-LTR retroelement reverse transcriptase [Arabidopsis
           thaliana]
          Length = 1374

 Score =  143 bits (361), Expect = 5e-32
 Identities = 83/292 (28%), Positives = 143/292 (48%), Gaps = 1/292 (0%)
 Frame = +3

Query: 30  MIAWNCQGLGNLETRSSVLDILNKENPDILFLSETKQQNKEMHKILKHLNVQNYQLVPPR 209
           +++WNCQG+GN  T   + +I     P+++FL ETK++   +  ++ HL   +   V P 
Sbjct: 3   ILSWNCQGVGNTPTVRHLREIRGLYFPEVIFLCETKKRRNYLENVVGHLGFFDLHTVEPI 62

Query: 210 GSAGGLCLXXXXXXXXXXXXXXXXXXNAEVTNHINDCSWTLTCFYGSPYRRMKLHSWKII 389
           G +GGL L                  +A +     D  + LTC YG P +  +   W+ +
Sbjct: 63  GKSGGLALMWKDSVQIKVLQSDKRLIDALLI--WQDKEFYLTCIYGEPVQAERGELWERL 120

Query: 390 EDMAQTINNPWIIIGDLNVVLHEEEKKSRFPFKRNEIRIFNNLINKCGLMDMGFTGYTFT 569
             +  + + PW++ GD N ++   EK      K +    F  ++N CGL ++  +GY F+
Sbjct: 121 TRLGLSRSGPWMLTGDFNELVDPSEKIGGPARKESSCLEFRQMLNSCGLWEVNHSGYQFS 180

Query: 570 WNNNRSDSDNIEQRLDRAVVNSKWNKKFPNSSIRHLGPLASDH-VLIRLNSYNHWNDGAI 746
           W  NR+D + ++ RLDR V N  W + FP +   +L  + SDH  LI     ++W   A 
Sbjct: 181 WYGNRND-ELVQCRLDRTVANQAWMELFPQAKATYLQKICSDHSPLINNLVGDNWRKWA- 238

Query: 747 PFKYSGEWIKHEQCKPLILDCWNSNIQGSPAFTVNKKLANVKYILKLWNKSS 902
            FKY   W++ E  K L+ + W+     + A  + +K+A+ +  +  W + S
Sbjct: 239 GFKYDKRWVQREGFKDLLCNFWSQQSTKTNALMM-EKIASCRREISKWKRVS 289


>emb|CCA66040.1| hypothetical protein [Beta vulgaris subsp. vulgaris]
          Length = 1362

 Score =  142 bits (358), Expect = 1e-31
 Identities = 81/300 (27%), Positives = 139/300 (46%), Gaps = 2/300 (0%)
 Frame = +3

Query: 24  ISMIAWNCQGLGNLETRSSVLDILNKENPDILFLSETKQQNKEMHKILKHLNVQNYQLVP 203
           + +++WNCQGL N  T +++  +  ++ P+I+F+ ET   ++ + KI K     N   + 
Sbjct: 1   MKLLSWNCQGLANPWTVNALHSLCWRDRPNIVFVMETMVDSQVLEKIRKRCGFMNGLCLS 60

Query: 204 PRGSAGGLCLXXXXXXXXXXXXXXXXXXNAEVTNHINDCSWTLTCFYGSPYRRMKLHSWK 383
             G++GG+ L                  +A V +   +  W     YG P    K  +W 
Sbjct: 61  SNGNSGGMGLWWNEMDVTVESFSAHHI-HAVVLDENKNPIWNAMGIYGWPETSNKHLTWS 119

Query: 384 IIEDMAQTINNPWIIIGDLNVVLHEEEKKSRFPFKRNEIRIFNNLINKCGLMDMGFTGYT 563
           ++  + Q  + P +  GD N +   EEK+   P     +  F  +I+ C + D+G+ G  
Sbjct: 120 LLRRLKQQCSLPVLFFGDFNEITSIEEKEGGAPRCERVMDAFREVIDDCAVKDLGYVGNR 179

Query: 564 FTWNNNRSDSDNIEQRLDRAVVNSKWNKKFPNSSIRHLGPLASDH--VLIRLNSYNHWND 737
           FTW    S S  I +RLDR + N +W   FP+  + HL    SDH  +L++    + +  
Sbjct: 180 FTWQRGNSPSTLIRERLDRMLANDEWCDNFPSWEVVHLPRYRSDHAPLLLKTGVNDSFRR 239

Query: 738 GAIPFKYSGEWIKHEQCKPLILDCWNSNIQGSPAFTVNKKLANVKYILKLWNKSSFGNIQ 917
           G   FK+   W+  E+C  ++ + WN    GS    +  +L  V   L  W   +FGN++
Sbjct: 240 GNKLFKFEAMWLSKEECGKIVEEAWN----GSAGEDITNRLDEVSRSLSTWATKTFGNLK 295


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