BLASTX nr result

ID: Papaver23_contig00029782 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Papaver23_contig00029782
         (675 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002277947.2| PREDICTED: DNA polymerase alpha catalytic su...    96   8e-18
emb|CBI21412.3| unnamed protein product [Vitis vinifera]               92   9e-17
gb|AFD98849.1| DNA polymerase alpha catalytic subunit [Solanum l...    89   6e-16
ref|XP_004169620.1| PREDICTED: DNA polymerase alpha catalytic su...    89   1e-15
ref|XP_004149697.1| PREDICTED: DNA polymerase alpha catalytic su...    89   1e-15

>ref|XP_002277947.2| PREDICTED: DNA polymerase alpha catalytic subunit-like [Vitis
           vinifera]
          Length = 1522

 Score = 95.5 bits (236), Expect = 8e-18
 Identities = 71/187 (37%), Positives = 94/187 (50%), Gaps = 5/187 (2%)
 Frame = -3

Query: 565 PNPXXXXXXLMGKQRLSSMFTSSVFNKK--DKPKGLSSDSLVDDVIAEFAPDETDREKRR 392
           P+P      +MGKQRLSSMFTSSVF K   DK KGLS DS+VDDVIAEFAPDE DRE+RR
Sbjct: 127 PSPLSAAAAMMGKQRLSSMFTSSVFKKSRDDKVKGLSCDSIVDDVIAEFAPDEADRERRR 186

Query: 391 RGQHRSILGSESLTQNSLIKSRSEGLVRADSIVRSESIXXXXXXXXXXXNEEIGNQDDAE 212
           RGQ   + G  +    + IK      +   SI    +            + + GN  + +
Sbjct: 187 RGQSGLVSGGRNFVPGTTIKME----ISPISIRPEPTKVTIADGDSVSSSMQNGNMVEGK 242

Query: 211 ---KESKDVEMVCADEVFDKFPQSCDDLMMDDQSVNVESSSIINXXXXXXXXXXXELFTL 41
              KESKD   +  D V +  P + +D    +Q+V  +                  + +L
Sbjct: 243 GVVKESKDANDLNCDAVEETVPDAVED--KSEQAVKRKE-----------------VHSL 283

Query: 40  NAKIKKE 20
           NAKIK+E
Sbjct: 284 NAKIKEE 290


>emb|CBI21412.3| unnamed protein product [Vitis vinifera]
          Length = 1561

 Score = 92.0 bits (227), Expect = 9e-17
 Identities = 49/80 (61%), Positives = 56/80 (70%), Gaps = 2/80 (2%)
 Frame = -3

Query: 565 PNPXXXXXXLMGKQRLSSMFTSSVFNKK--DKPKGLSSDSLVDDVIAEFAPDETDREKRR 392
           P+P      +MGKQRLSSMFTSSVF K   DK KGLS DS+VDDVIAEFAPDE DRE+RR
Sbjct: 127 PSPLSAAAAMMGKQRLSSMFTSSVFKKSRDDKVKGLSCDSIVDDVIAEFAPDEADRERRR 186

Query: 391 RGQHRSILGSESLTQNSLIK 332
           RGQ   + G  +    + IK
Sbjct: 187 RGQSGLVSGGRNFVPGTTIK 206


>gb|AFD98849.1| DNA polymerase alpha catalytic subunit [Solanum lycopersicum]
          Length = 1561

 Score = 89.4 bits (220), Expect = 6e-16
 Identities = 47/87 (54%), Positives = 58/87 (66%), Gaps = 3/87 (3%)
 Frame = -3

Query: 535 MGKQRLSSMFTSSVFNKKDKPKGLSSDSLVDDVIAEFAPDETDREKRRRGQHRSILGSES 356
           MGKQR+SS+FTSSVF + DK + LS DS+VDDVIAEFAPDE DRE+RRRG   S+  S S
Sbjct: 141 MGKQRISSLFTSSVFKRDDKTRNLSCDSIVDDVIAEFAPDEADRERRRRGNSNSLQASRS 200

Query: 355 LTQNS---LIKSRSEGLVRADSIVRSE 284
              N     +K+   G  + D + R E
Sbjct: 201 SVANPNLLNVKTEKLGAGKVDLMTRQE 227


>ref|XP_004169620.1| PREDICTED: DNA polymerase alpha catalytic subunit-like, partial
           [Cucumis sativus]
          Length = 498

 Score = 88.6 bits (218), Expect = 1e-15
 Identities = 70/191 (36%), Positives = 96/191 (50%), Gaps = 19/191 (9%)
 Frame = -3

Query: 535 MGKQRLSSMFTSSVFNKK---DKPKGLSSDSLVDDVIAEFAPDETDREKRRRGQHRSILG 365
           MGKQ+LSSMFTSS+F K    DK KGL  DS+VDDVIAEFAPDETDRE+RR+GQ  +I  
Sbjct: 138 MGKQKLSSMFTSSIFRKTGRDDKAKGLGCDSIVDDVIAEFAPDETDRERRRKGQIGAIPI 197

Query: 364 SESLTQNSLIKSR---SEGL---VRADSIVRSES--------IXXXXXXXXXXXNEEIGN 227
             ++T    +KS    + GL     +D I  +E+        +            E  GN
Sbjct: 198 LRTVTSVPAVKSEGFTARGLNLTGESDFIKDAENGNSETTRVVTNSDLESVRGGVEVQGN 257

Query: 226 QDDAEKESKDVEMVCADEVFDKFPQSC--DDLMMDDQSVNVESSSIINXXXXXXXXXXXE 53
            +  E +SKD+      +  ++ P S   +D+  D   + VE+ +               
Sbjct: 258 GETKEFDSKDLNSQINLDPVEQLPNSLIKEDVSGDTMPIKVETKA-------EPLVKKEP 310

Query: 52  LFTLNAKIKKE 20
           + TLNAKI  E
Sbjct: 311 VSTLNAKISNE 321


>ref|XP_004149697.1| PREDICTED: DNA polymerase alpha catalytic subunit-like [Cucumis
           sativus]
          Length = 1547

 Score = 88.6 bits (218), Expect = 1e-15
 Identities = 70/191 (36%), Positives = 96/191 (50%), Gaps = 19/191 (9%)
 Frame = -3

Query: 535 MGKQRLSSMFTSSVFNKK---DKPKGLSSDSLVDDVIAEFAPDETDREKRRRGQHRSILG 365
           MGKQ+LSSMFTSS+F K    DK KGL  DS+VDDVIAEFAPDETDRE+RR+GQ  +I  
Sbjct: 138 MGKQKLSSMFTSSIFRKTGRDDKAKGLGCDSIVDDVIAEFAPDETDRERRRKGQIGAIPI 197

Query: 364 SESLTQNSLIKSR---SEGL---VRADSIVRSES--------IXXXXXXXXXXXNEEIGN 227
             ++T    +KS    + GL     +D I  +E+        +            E  GN
Sbjct: 198 LRTVTSVPAVKSEGFTARGLNLTGESDFIKDAENGNSETTRVVTNSDLESVRGGVEVQGN 257

Query: 226 QDDAEKESKDVEMVCADEVFDKFPQSC--DDLMMDDQSVNVESSSIINXXXXXXXXXXXE 53
            +  E +SKD+      +  ++ P S   +D+  D   + VE+ +               
Sbjct: 258 GETKEFDSKDLNSQINLDPVEQLPNSLIKEDVSGDTMPIKVETKA-------EPLVKKEP 310

Query: 52  LFTLNAKIKKE 20
           + TLNAKI  E
Sbjct: 311 VSTLNAKISNE 321


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