BLASTX nr result

ID: Papaver23_contig00029663 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Papaver23_contig00029663
         (895 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002532277.1| conserved hypothetical protein [Ricinus comm...    67   4e-09
ref|XP_002301588.1| f-box family protein [Populus trichocarpa] g...    67   7e-09
ref|XP_002320506.1| f-box family protein [Populus trichocarpa] g...    63   1e-07
ref|XP_003610528.1| F-box family protein [Medicago truncatula] g...    61   3e-07
ref|XP_002532719.1| ubiquitin-protein ligase, putative [Ricinus ...    60   5e-07

>ref|XP_002532277.1| conserved hypothetical protein [Ricinus communis]
           gi|223528011|gb|EEF30092.1| conserved hypothetical
           protein [Ricinus communis]
          Length = 410

 Score = 67.4 bits (163), Expect = 4e-09
 Identities = 48/142 (33%), Positives = 70/142 (49%), Gaps = 17/142 (11%)
 Frame = +3

Query: 3   PVTREYILLPICTENCLKGRNVFGFGYNDKTNEYKVVRISYFGNTNNPPY---------- 152
           P T +Y+ LP   +   + R   GFG++  T EYKVVR+ Y+ N                
Sbjct: 143 PFTSDYLELPEPGQVLNQHRVATGFGFHSTTKEYKVVRVVYYRNNKEEGTNFQKRRYSLP 202

Query: 153 KGEVEVYTLGSDS-GWRSAAETNCLLLSNFYSLSVCVDGALHWF-----QKGCSKIVVFD 314
           + EV+V T+G+ S  WRS  ET+  LL N     V V+G LHW       +   +++ FD
Sbjct: 203 RSEVQVLTVGNGSLTWRSKGETSYQLLGN--PSHVVVNGRLHWLSCRYRNQSLRRLISFD 260

Query: 315 LGEEEFDLLSSP-GITGRRFCS 377
           L +E+F  +  P G +  R CS
Sbjct: 261 LADEQFREVPCPVGASFGRHCS 282


>ref|XP_002301588.1| f-box family protein [Populus trichocarpa]
           gi|222843314|gb|EEE80861.1| f-box family protein
           [Populus trichocarpa]
          Length = 408

 Score = 66.6 bits (161), Expect = 7e-09
 Identities = 41/116 (35%), Positives = 60/116 (51%), Gaps = 13/116 (11%)
 Frame = +3

Query: 66  VFGFGYNDKTNEYKVVRISYFGNTNNPPYK--------GEVEVYTLGSDSGWRSAAETNC 221
           VFGFG+N KTNEYKV+RI Y+ N +    +         +V++ TLG   GWRS  + + 
Sbjct: 167 VFGFGFNPKTNEYKVIRIVYYRNGHGRYPRSRRIIYPLSQVQILTLGC-PGWRSLGKVSY 225

Query: 222 LLLSNFYSLSVCVDGALHWFQKGC-----SKIVVFDLGEEEFDLLSSPGITGRRFC 374
            L+    +    V+G LHW  + C      ++V FDL +E+F  +  P   G   C
Sbjct: 226 RLVRR--ASETLVNGRLHWVSRPCRNKPARRLVSFDLTDEQFREVPKPDCGGLNRC 279


>ref|XP_002320506.1| f-box family protein [Populus trichocarpa]
           gi|222861279|gb|EEE98821.1| f-box family protein
           [Populus trichocarpa]
          Length = 422

 Score = 62.8 bits (151), Expect = 1e-07
 Identities = 40/117 (34%), Positives = 59/117 (50%), Gaps = 13/117 (11%)
 Frame = +3

Query: 66  VFGFGYNDKTNEYKVVRISYFGNTNNPPYK--------GEVEVYTLGSDSGWRSAAETNC 221
           V GFG+N KT EYKV+RI Y+ N +    +         EV++ TLG    WRS  + + 
Sbjct: 168 VSGFGFNPKTKEYKVIRIVYYRNGHGGYPRSRRIIYPLSEVQILTLGCPE-WRSLGKVSY 226

Query: 222 LLLSNFYSLSVCVDGALHWFQKGC-----SKIVVFDLGEEEFDLLSSPGITGRRFCS 377
            L+    +    V+G LHW  + C      ++V FDL +E+F  +S P   G   C+
Sbjct: 227 RLVRR--ASGALVNGRLHWISRPCRNKPARRLVSFDLTDEQFREVSKPDCGGLNRCN 281


>ref|XP_003610528.1| F-box family protein [Medicago truncatula]
           gi|355511583|gb|AES92725.1| F-box family protein
           [Medicago truncatula]
          Length = 392

 Score = 61.2 bits (147), Expect = 3e-07
 Identities = 39/117 (33%), Positives = 60/117 (51%), Gaps = 6/117 (5%)
 Frame = +3

Query: 39  TENCLKGRNVFGFGYNDKTNEYKVVRISYFGNTNNPPYKGEVEVYTLGSDSGWRSAAETN 218
           T   L   +V+GFGY+  T++YK+V ISYF + +N  +   V++YT+ +D  W++     
Sbjct: 133 TITTLLAAHVYGFGYDSATDDYKLVSISYFVDLHNRSFDSHVKIYTMRTDV-WKTLPSMP 191

Query: 219 CLLLSNFYSLSVCVDGALHWF------QKGCSKIVVFDLGEEEFDLLSSPGITGRRF 371
             L     ++ V V GALHW        +    IV FDL  E F  ++ PG    +F
Sbjct: 192 YALCC-ARTMGVFVSGALHWVVTRDLEPESRDLIVAFDLRFEVFREVALPGTVDGKF 247


>ref|XP_002532719.1| ubiquitin-protein ligase, putative [Ricinus communis]
           gi|223527546|gb|EEF29668.1| ubiquitin-protein ligase,
           putative [Ricinus communis]
          Length = 389

 Score = 60.5 bits (145), Expect = 5e-07
 Identities = 34/102 (33%), Positives = 54/102 (52%), Gaps = 6/102 (5%)
 Frame = +3

Query: 63  NVFGFGYNDKTNEYKVVRISYFGNTNNPPYKGEVEVYTLGSDSGWRSAAETNCLLLSNFY 242
           +VFGFGY+   ++YK+VRI+ FG  +   ++ EV+V++L  +S  R A    C+L     
Sbjct: 140 SVFGFGYDLSNDDYKLVRIAQFGGVDRKSFESEVKVFSLRKNSWRRIADMPYCVLYPG-- 197

Query: 243 SLSVCVDGALHWF------QKGCSKIVVFDLGEEEFDLLSSP 350
              +  +GALHW             IV  DLG E++ ++  P
Sbjct: 198 ENGIYANGALHWLVSQDPDSTVADTIVALDLGVEDYHVVPKP 239


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