BLASTX nr result

ID: Papaver23_contig00029624 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Papaver23_contig00029624
         (449 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

gb|AFK38884.1| unknown [Lotus japonicus]                              104   7e-21
ref|XP_003531903.1| PREDICTED: protein YIF1B-like [Glycine max]       104   9e-21
gb|ABK24438.1| unknown [Picea sitchensis]                             104   9e-21
ref|XP_002268449.2| PREDICTED: protein YIF1B [Vitis vinifera]         102   4e-20
emb|CBI36691.3| unnamed protein product [Vitis vinifera]              102   4e-20

>gb|AFK38884.1| unknown [Lotus japonicus]
          Length = 269

 Score =  104 bits (260), Expect = 7e-21
 Identities = 54/99 (54%), Positives = 68/99 (68%), Gaps = 1/99 (1%)
 Frame = +3

Query: 3   GNEETPLLDIVSYSGYAFAGVVISVAGRIILLGNPSYYYYTVIGWECLCMAVFLVKIMKR 182
           G+ E PLLDI++Y+GY F G+ ++V GRIIL     Y YY ++ W CLCMAVFLVK MKR
Sbjct: 173 GSGEAPLLDIIAYAGYTFTGICLAVLGRIIL----GYSYYFLMPWTCLCMAVFLVKTMKR 228

Query: 183 VVFTEGACRYKLY-STKRHYLLLLVAVAQIPLLFWLCNI 296
           V+F E     + Y S+K HYLLL +A+ Q PL  WL NI
Sbjct: 229 VLFAE----VRTYDSSKHHYLLLFIALVQFPLFTWLGNI 263


>ref|XP_003531903.1| PREDICTED: protein YIF1B-like [Glycine max]
          Length = 273

 Score =  104 bits (259), Expect = 9e-21
 Identities = 55/99 (55%), Positives = 71/99 (71%), Gaps = 1/99 (1%)
 Frame = +3

Query: 3   GNEETPLLDIVSYSGYAFAGVVISVAGRIILLGNPSYYYYTVIGWECLCMAVFLVKIMKR 182
           G+ E PLLDI++Y+GY F G+ ++V+GRII     SY YY ++ W CLCMAV+LVK MKR
Sbjct: 177 GSGEAPLLDIIAYAGYTFPGLCLAVSGRIIW----SYSYYFLMLWTCLCMAVYLVKTMKR 232

Query: 183 VVFTEGACRYKLY-STKRHYLLLLVAVAQIPLLFWLCNI 296
           V+F E     + Y S+K HYLLLL+A+AQ PL  WL NI
Sbjct: 233 VLFAE----VRSYDSSKHHYLLLLIALAQFPLFTWLGNI 267


>gb|ABK24438.1| unknown [Picea sitchensis]
          Length = 283

 Score =  104 bits (259), Expect = 9e-21
 Identities = 52/95 (54%), Positives = 64/95 (67%)
 Frame = +3

Query: 3   GNEETPLLDIVSYSGYAFAGVVISVAGRIILLGNPSYYYYTVIGWECLCMAVFLVKIMKR 182
           G  E P+LD+V+Y GYAF G+ +SV  RI+     SY YY VI W CLCM +FLVK MKR
Sbjct: 189 GGGEAPILDLVAYGGYAFVGIALSVLARILW----SYSYYVVILWTCLCMGIFLVKTMKR 244

Query: 183 VVFTEGACRYKLYSTKRHYLLLLVAVAQIPLLFWL 287
           ++F E A  Y   S++ HYLLL +AVAQ PL  WL
Sbjct: 245 ILFAE-ARSYDRDSSRHHYLLLFMAVAQFPLFLWL 278


>ref|XP_002268449.2| PREDICTED: protein YIF1B [Vitis vinifera]
          Length = 348

 Score =  102 bits (253), Expect = 4e-20
 Identities = 54/104 (51%), Positives = 70/104 (67%), Gaps = 1/104 (0%)
 Frame = +3

Query: 3   GNEETPLLDIVSYSGYAFAGVVISVAGRIILLGNPSYYYYTVIGWECLCMAVFLVKIMKR 182
           G+ E PLLDIV+Y+GY F G+ ++V GRI      SY YY ++ W CLCM +FLVK MKR
Sbjct: 252 GSGEAPLLDIVAYAGYTFTGMCLAVFGRIAW----SYSYYFLMPWACLCMGIFLVKTMKR 307

Query: 183 VVFTEGACRYKLY-STKRHYLLLLVAVAQIPLLFWLCNIY*SHW 311
           V+F E     + Y S++ HYLLL +A+AQ+PL  WL NI   HW
Sbjct: 308 VLFAE----VRSYDSSRHHYLLLFIALAQLPLFIWLGNIS-VHW 346


>emb|CBI36691.3| unnamed protein product [Vitis vinifera]
          Length = 337

 Score =  102 bits (253), Expect = 4e-20
 Identities = 54/104 (51%), Positives = 70/104 (67%), Gaps = 1/104 (0%)
 Frame = +3

Query: 3   GNEETPLLDIVSYSGYAFAGVVISVAGRIILLGNPSYYYYTVIGWECLCMAVFLVKIMKR 182
           G+ E PLLDIV+Y+GY F G+ ++V GRI      SY YY ++ W CLCM +FLVK MKR
Sbjct: 241 GSGEAPLLDIVAYAGYTFTGMCLAVFGRIAW----SYSYYFLMPWACLCMGIFLVKTMKR 296

Query: 183 VVFTEGACRYKLY-STKRHYLLLLVAVAQIPLLFWLCNIY*SHW 311
           V+F E     + Y S++ HYLLL +A+AQ+PL  WL NI   HW
Sbjct: 297 VLFAE----VRSYDSSRHHYLLLFIALAQLPLFIWLGNIS-VHW 335


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