BLASTX nr result

ID: Papaver23_contig00029602 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Papaver23_contig00029602
         (812 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

gb|ADN34129.1| high mobility group family [Cucumis melo subsp. m...   148   1e-33
ref|XP_004145526.1| PREDICTED: high mobility group B protein 9-l...   148   2e-33
ref|XP_002307758.1| high mobility group family [Populus trichoca...   143   4e-32
gb|ABK95398.1| unknown [Populus trichocarpa]                          143   4e-32
ref|XP_003523234.1| PREDICTED: high mobility group B protein 9-l...   142   9e-32

>gb|ADN34129.1| high mobility group family [Cucumis melo subsp. melo]
          Length = 324

 Score =  148 bits (374), Expect = 1e-33
 Identities = 82/161 (50%), Positives = 97/161 (60%), Gaps = 13/161 (8%)
 Frame = +2

Query: 44  PYQTPSNKTKTSSALQTKSPKNVP--------VIGTIDGKFDCGYLVSVKLGDEILRGVL 199
           P+   S  ++   AL   +PK           V GTIDGKFDCGYLV+VKLG E+LRGVL
Sbjct: 133 PFSFGSPTSENELALVEYTPKTTSFSPGPPSEVTGTIDGKFDCGYLVTVKLGSEVLRGVL 192

Query: 200 YHPPALDSASMDPTSQSAIV-----XXXXXXXXXXXXXXXXXXXXXXXNRSGYNFFFSEK 364
           YHP     + + P S +AIV                            NRSGYNFFF+EK
Sbjct: 193 YHPEQPPPSDLRPLSTNAIVPYTGGRHRHSGRRHRRSRRKGDPNHPKPNRSGYNFFFAEK 252

Query: 365 HSKLKTVYPNREREFTKMIGESWSNLSQEDRMVYQKIGLQD 487
           H KLK++YPNREREFTKMIGESW+NLS E+RMVYQ IGL+D
Sbjct: 253 HYKLKSLYPNREREFTKMIGESWNNLSPEERMVYQNIGLKD 293


>ref|XP_004145526.1| PREDICTED: high mobility group B protein 9-like [Cucumis sativus]
           gi|449519744|ref|XP_004166894.1| PREDICTED: high
           mobility group B protein 9-like [Cucumis sativus]
          Length = 324

 Score =  148 bits (373), Expect = 2e-33
 Identities = 82/161 (50%), Positives = 100/161 (62%), Gaps = 13/161 (8%)
 Frame = +2

Query: 44  PYQTPSNKTKTSSALQTKSPKNVP--------VIGTIDGKFDCGYLVSVKLGDEILRGVL 199
           P+ +P+++ +   AL   +PK           V GTIDGKFDCGYLV+VKLG E+LRGVL
Sbjct: 135 PFGSPTSENEL--ALVEYTPKTTSFSPGPPSEVTGTIDGKFDCGYLVTVKLGSEVLRGVL 192

Query: 200 YHPPALDSASMDPTSQSAIV-----XXXXXXXXXXXXXXXXXXXXXXXNRSGYNFFFSEK 364
           YHP     + + P S +AIV                            NRSGYNFFF+EK
Sbjct: 193 YHPDQPPPSDLRPLSTNAIVPYTGGRYRHSGRRHRRSRRKGDPNHPKPNRSGYNFFFAEK 252

Query: 365 HSKLKTVYPNREREFTKMIGESWSNLSQEDRMVYQKIGLQD 487
           H KLK++YPNREREFTKMIGESW+NLS E+RMVYQ IGL+D
Sbjct: 253 HYKLKSLYPNREREFTKMIGESWNNLSPEERMVYQNIGLKD 293


>ref|XP_002307758.1| high mobility group family [Populus trichocarpa]
           gi|222857207|gb|EEE94754.1| high mobility group family
           [Populus trichocarpa]
          Length = 329

 Score =  143 bits (361), Expect = 4e-32
 Identities = 74/133 (55%), Positives = 88/133 (66%), Gaps = 1/133 (0%)
 Frame = +2

Query: 92  TKSPKNVPVIGTIDGKFDCGYLVSVKLGDEILRGVLYHPPALDSASMDPTSQSAIVXXXX 271
           T+S  +    GTI+GKFDCGYLVSV+LG E+L GVLYHP   D ++  P    AIV    
Sbjct: 163 TESSSSFSASGTIEGKFDCGYLVSVQLGSEVLHGVLYHPDQQDLSNSIPQYDGAIVPYTP 222

Query: 272 XXXXXXXXXXXXXXXXXXX-NRSGYNFFFSEKHSKLKTVYPNREREFTKMIGESWSNLSQ 448
                               NRSGYNFFF+EKH KLK++YPNREREFTKMIG+SWS+LS 
Sbjct: 223 NRRRRRRRSRRSGDPSYPKPNRSGYNFFFAEKHYKLKSLYPNREREFTKMIGQSWSSLSA 282

Query: 449 EDRMVYQKIGLQD 487
           E+RMVYQ IGL+D
Sbjct: 283 EERMVYQNIGLKD 295


>gb|ABK95398.1| unknown [Populus trichocarpa]
          Length = 317

 Score =  143 bits (361), Expect = 4e-32
 Identities = 74/133 (55%), Positives = 88/133 (66%), Gaps = 1/133 (0%)
 Frame = +2

Query: 92  TKSPKNVPVIGTIDGKFDCGYLVSVKLGDEILRGVLYHPPALDSASMDPTSQSAIVXXXX 271
           T+S  +    GTI+GKFDCGYLVSV+LG E+L GVLYHP   D ++  P    AIV    
Sbjct: 151 TESSSSFSASGTIEGKFDCGYLVSVQLGSEVLHGVLYHPDQQDLSNSIPQYDGAIVPYTP 210

Query: 272 XXXXXXXXXXXXXXXXXXX-NRSGYNFFFSEKHSKLKTVYPNREREFTKMIGESWSNLSQ 448
                               NRSGYNFFF+EKH KLK++YPNREREFTKMIG+SWS+LS 
Sbjct: 211 NRRRRRRRSRRSGDPSYPKPNRSGYNFFFAEKHYKLKSLYPNREREFTKMIGQSWSSLSA 270

Query: 449 EDRMVYQKIGLQD 487
           E+RMVYQ IGL+D
Sbjct: 271 EERMVYQNIGLKD 283


>ref|XP_003523234.1| PREDICTED: high mobility group B protein 9-like [Glycine max]
          Length = 322

 Score =  142 bits (358), Expect = 9e-32
 Identities = 74/125 (59%), Positives = 84/125 (67%), Gaps = 3/125 (2%)
 Frame = +2

Query: 122 GTIDGKFDCGYLVSVKLGDEILRGVLYHPPALDSASMDPTSQSAIVXXXXXXXXXXXXXX 301
           GTI+GKFDCGYLVSVKLG E+LRGVLYHP  L      P  +SAIV              
Sbjct: 172 GTIEGKFDCGYLVSVKLGSEVLRGVLYHPEQLVPPPSIPKHESAIVPINRKPHRSGRRKK 231

Query: 302 XXXXXXXXX---NRSGYNFFFSEKHSKLKTVYPNREREFTKMIGESWSNLSQEDRMVYQK 472
                       NRSGYNFFF+EKH  LKT+YPNREREFTKMIG+SW++LS E+RMVYQ 
Sbjct: 232 NKRRWDPNYPKPNRSGYNFFFAEKHYTLKTLYPNREREFTKMIGQSWNSLSPEERMVYQN 291

Query: 473 IGLQD 487
           IGL+D
Sbjct: 292 IGLRD 296


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