BLASTX nr result
ID: Papaver23_contig00029583
seq
BLASTX 2.2.25 [Feb-01-2011] Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Query= Papaver23_contig00029583 (510 letters) Database: ./nr 23,641,837 sequences; 8,123,359,852 total letters Searching..................................................done Score E Sequences producing significant alignments: (bits) Value ref|XP_002273302.1| PREDICTED: uncharacterized protein LOC100266... 75 7e-12 ref|XP_002514596.1| splicing factor, arginine/serine-rich 2,rnap... 58 9e-07 >ref|XP_002273302.1| PREDICTED: uncharacterized protein LOC100266325 [Vitis vinifera] gi|297734114|emb|CBI15361.3| unnamed protein product [Vitis vinifera] Length = 648 Score = 74.7 bits (182), Expect = 7e-12 Identities = 53/136 (38%), Positives = 68/136 (50%), Gaps = 5/136 (3%) Frame = +2 Query: 26 SSMKIA---CHRRDVQSHIKIFRENWDALRNGSLQFSSTSGSRNSKTPDSNVFNAKTXXX 196 SSM +A R+V +HI+ RENW+ALR+GS+ FSS G ++ Sbjct: 266 SSMSVARTLLRCRNVNAHIQALRENWNALRSGSMTFSSILGDSGGESSQK---------- 315 Query: 197 XXXXXXXNTYNKNVA-ENLSNKKNPYDTDKAWKMLDIAKSVQRAREGK-TTHCVSKHQLG 370 YN + N YDT+KAWKM+D AKS+QRA E H VSKH LG Sbjct: 316 ---------YNVGASCPKQDNNACSYDTEKAWKMMDKAKSIQRACERTGIIHQVSKHPLG 366 Query: 371 KRNTQADATVTNLNSS 418 K N + V N+ SS Sbjct: 367 KVNVPKE--VANVKSS 380 >ref|XP_002514596.1| splicing factor, arginine/serine-rich 2,rnap interacting protein, putative [Ricinus communis] gi|223546200|gb|EEF47702.1| splicing factor, arginine/serine-rich 2,rnap interacting protein, putative [Ricinus communis] Length = 632 Score = 57.8 bits (138), Expect = 9e-07 Identities = 34/104 (32%), Positives = 56/104 (53%), Gaps = 7/104 (6%) Frame = +2 Query: 53 RDVQSHIKIFRENWDALRNGSLQFSSTSGSRNSK------TP-DSNVFNAKTXXXXXXXX 211 RDV S+++ RENWDALR+GSL+FSS+S S+ TP ++ + ++ Sbjct: 297 RDVHSYVRALRENWDALRSGSLRFSSSSVESCSRSIAKCYTPVVTHESSGQSHTMSSTSG 356 Query: 212 XXNTYNKNVAENLSNKKNPYDTDKAWKMLDIAKSVQRAREGKTT 343 T N + + ++ +D KAWKM+ AKS+ + + +T Sbjct: 357 QQLTINDGLPGTFAQDRHSHDAKKAWKMMAKAKSIHQGSKNPST 400