BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Papaver23_contig00029570
         (647 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

pir||T02087 gag/pol polyprotein - maize retrotransposon Hopscotc...   236   4e-60
gb|AAL66754.1|AF464738_5 putative copia-like retrotransposon Hop...   230   1e-58
gb|AAN06870.1| Putative gag-pol polyprotein [Oryza sativa Japoni...   230   2e-58
emb|CAN61230.1| hypothetical protein VITISV_010115 [Vitis vinifera]   229   3e-58
emb|CAN73071.1| hypothetical protein VITISV_032383 [Vitis vinifera]   228   7e-58

>pir||T02087 gag/pol polyprotein - maize retrotransposon Hopscotch
            gi|531389|gb|AAA57005.1| copia-like retrotransposon
            Hopscotch polyprotein [Zea mays]
          Length = 1439

 Score =  236 bits (601), Expect = 4e-60
 Identities = 119/216 (55%), Positives = 153/216 (70%), Gaps = 2/216 (0%)
 Frame = -3

Query: 642  CKLQKSLYGLKQAPRAWYHRLSTFLLQLGFVTSKCDSSLFIRRDAHGVVYLLVYVDDIIL 463
            C LQKSLYGLKQ PRAWY RLS  L  LGFV SK D SLFI       +Y+LVYVDDII+
Sbjct: 1065 CHLQKSLYGLKQRPRAWYSRLSEKLQSLGFVPSKADVSLFIYNAHSTAIYILVYVDDIII 1124

Query: 462  TGSNTATLEFIRMSLHKEFAIKDLGSLS*FLGIEATRTSSGMFLTQKRYAHDLLIRAKMD 283
            TGS+   ++ +   L  +FAIKDLG L  FLGIE  R   G+ L Q++YA DLL R  M+
Sbjct: 1125 TGSSPHAIDNVLAKLKDDFAIKDLGDLHYFLGIEVHRKGDGLLLCQEKYARDLLKRVGME 1184

Query: 282  GVKPIQTPLSTTGDISSDRSTLL--RDPTEYRSIVGALQYLTFTRPDLAYAVNKVCQYMH 109
              KP+ TP++T+  +S+   TLL   + T+YRS+VGALQYLT TRPDL+YA+N+VCQ++H
Sbjct: 1185 CCKPVHTPVATSEKLSASAGTLLSPEETTKYRSVVGALQYLTLTRPDLSYAINRVCQFLH 1244

Query: 108  APTEFHWMLVKRILRFLKQTSTFGITLQPANALQLS 1
            APT+ HW  VKRILR ++ T   G+T++P+ +L LS
Sbjct: 1245 APTDLHWTAVKRILRNIQHTIGLGLTIRPSLSLMLS 1280


>gb|AAL66754.1|AF464738_5 putative copia-like retrotransposon Hopscotch polyprotein [Zea mays]
          Length = 1313

 Score =  230 bits (587), Expect = 1e-58
 Identities = 117/217 (53%), Positives = 150/217 (69%), Gaps = 2/217 (0%)
 Frame = -3

Query: 645  VCKLQKSLYGLKQAPRAWYHRLSTFLLQLGFVTSKCDSSLFIRRDAHGVVYLLVYVDDII 466
            VCKL K+LYGLKQAPRAWY RLS  LL LGF  SK D+SLF        +++LVYVDDII
Sbjct: 944  VCKLDKALYGLKQAPRAWYSRLSNKLLSLGFQASKADTSLFFYNKGSVTIFVLVYVDDII 1003

Query: 465  LTGSNTATLEFIRMSLHKEFAIKDLGSLS*FLGIEATRTSSGMFLTQKRYAHDLLIRAKM 286
            +  S     E +   L+KEFA+KDLG L+ FLGIE  +   G+ LTQ +YA DLL +  M
Sbjct: 1004 VASSTHKATEALLSDLNKEFALKDLGDLNYFLGIEVNKVRDGIILTQDKYASDLLKKVGM 1063

Query: 285  DGVKPIQTPLSTTGDISSDRSTLL--RDPTEYRSIVGALQYLTFTRPDLAYAVNKVCQYM 112
               KPI TPLST+  +S    + L  +D T+YRSIVGALQYLT TRPD+A++VNKVCQ++
Sbjct: 1064 SDCKPISTPLSTSEKLSIHEGSPLGEKDITQYRSIVGALQYLTLTRPDIAFSVNKVCQFL 1123

Query: 111  HAPTEFHWMLVKRILRFLKQTSTFGITLQPANALQLS 1
            HAPT  HW  VKRILR++KQ +  G+ +  +++  +S
Sbjct: 1124 HAPTTLHWAAVKRILRYIKQCTNLGLHIHRSDSTLVS 1160


>gb|AAN06870.1| Putative gag-pol polyprotein [Oryza sativa Japonica Group]
            gi|108706314|gb|ABF94109.1| retrotransposon protein,
            putative, Ty1-copia subclass [Oryza sativa Japonica
            Group]
          Length = 1247

 Score =  230 bits (586), Expect = 2e-58
 Identities = 116/217 (53%), Positives = 148/217 (68%), Gaps = 2/217 (0%)
 Frame = -3

Query: 645  VCKLQKSLYGLKQAPRAWYHRLSTFLLQLGFVTSKCDSSLFIRRDAHGVVYLLVYVDDII 466
            VCKL K+LYGLKQAPRAWY RLS  L  +GF  SK D+SLF       ++++L+YVDDII
Sbjct: 878  VCKLDKALYGLKQAPRAWYSRLSKKLYDMGFQGSKADTSLFFYNKGDLIIFVLIYVDDII 937

Query: 465  LTGSNTATLEFIRMSLHKEFAIKDLGSLS*FLGIEATRTSSGMFLTQKRYAHDLLIRAKM 286
            +T S    +  +   L KEFA+KDLG L  FLGIE T+ S G+ LTQ +Y +DLL R  M
Sbjct: 938  VTSSRQEAVPALLRDLQKEFALKDLGDLHYFLGIEVTKVSGGIVLTQDKYVNDLLRRVNM 997

Query: 285  DGVKPIQTPLSTTGDISSDRSTLL--RDPTEYRSIVGALQYLTFTRPDLAYAVNKVCQYM 112
               KP+ TPLST+  +S +    L   D T YRS+VGALQYLT TRPD+A+ VNKVCQ++
Sbjct: 998  FDCKPVSTPLSTSEKLSINEGDPLGPNDATHYRSVVGALQYLTLTRPDIAFPVNKVCQFL 1057

Query: 111  HAPTEFHWMLVKRILRFLKQTSTFGITLQPANALQLS 1
            HAPT  HW  VKRILR+LKQ +  G+ L  + ++ +S
Sbjct: 1058 HAPTTHHWAAVKRILRYLKQCTRLGLKLSKSRSMLVS 1094


>emb|CAN61230.1| hypothetical protein VITISV_010115 [Vitis vinifera]
          Length = 478

 Score =  229 bits (585), Expect = 3e-58
 Identities = 113/214 (52%), Positives = 150/214 (70%)
 Frame = -3

Query: 645 VCKLQKSLYGLKQAPRAWYHRLSTFLLQLGFVTSKCDSSLFIRRDAHGVVYLLVYVDDII 466
           VCKL+K++YGLKQAPRAWYH L  FLLQ GF+ S  D+SLFI  +   ++YLLVYVDDII
Sbjct: 97  VCKLRKAIYGLKQAPRAWYHELCQFLLQFGFINSIADTSLFIFNNHDTILYLLVYVDDII 156

Query: 465 LTGSNTATLEFIRMSLHKEFAIKDLGSLS*FLGIEATRTSSGMFLTQKRYAHDLLIRAKM 286
           +TG+N    +     L + F++KDLG L+ FLG+E T  ++G+FL+Q++Y  DLL R  M
Sbjct: 157 ITGNNVEAAQTFIQQLSQRFSLKDLGPLTYFLGVEVTSHTNGLFLSQRKYIADLLNRTHM 216

Query: 285 DGVKPIQTPLSTTGDISSDRSTLLRDPTEYRSIVGALQYLTFTRPDLAYAVNKVCQYMHA 106
              KP  TPL+T+  ++    T L DPTEYR++VG+LQYL+ TRPD+AY VNK+ Q+MH 
Sbjct: 217 TEAKPAPTPLATSPILTLQSGTPLSDPTEYRTVVGSLQYLSLTRPDIAYTVNKLSQFMHQ 276

Query: 105 PTEFHWMLVKRILRFLKQTSTFGITLQPANALQL 4
           PT  HW  VKR+LR+L  T    ITL+  + L L
Sbjct: 277 PTSDHWNAVKRLLRYLCGTLDHDITLRRTSPLAL 310


>emb|CAN73071.1| hypothetical protein VITISV_032383 [Vitis vinifera]
          Length = 1239

 Score =  228 bits (581), Expect = 7e-58
 Identities = 113/209 (54%), Positives = 154/209 (73%)
 Frame = -3

Query: 645  VCKLQKSLYGLKQAPRAWYHRLSTFLLQLGFVTSKCDSSLFIRRDAHGVVYLLVYVDDII 466
            VC L+K+LYGLKQAPRAW+ R S+FLL LGF  S+ D+SLF+      ++YLL+YVDDII
Sbjct: 846  VCLLKKALYGLKQAPRAWFQRFSSFLLTLGFSCSRADTSLFVFHQQSSLIYLLLYVDDII 905

Query: 465  LTGSNTATLEFIRMSLHKEFAIKDLGSLS*FLGIEATRTSSGMFLTQKRYAHDLLIRAKM 286
            +TG+N + L+     LH EFA KDLGSLS FLG+EA+ T  G+F++Q +YA D+L RA++
Sbjct: 906  VTGNNPSLLDSFTRKLHSEFATKDLGSLSYFLGLEASPTPDGLFISQLKYARDILTRAQL 965

Query: 285  DGVKPIQTPLSTTGDISSDRSTLLRDPTEYRSIVGALQYLTFTRPDLAYAVNKVCQYMHA 106
               KP+ TP+  +  ++   S    +PT YRS+VGALQYLT TRPD+A+AVN V Q++HA
Sbjct: 966  LDSKPVHTPMVVSQHLTVAGSP-FSNPTLYRSLVGALQYLTITRPDIAHAVNSVSQFLHA 1024

Query: 105  PTEFHWMLVKRILRFLKQTSTFGITLQPA 19
            PT  H++ VKRILR++K T  FG+T +P+
Sbjct: 1025 PTIDHFLAVKRILRYVKGTLHFGLTFRPS 1053