BLASTX nr result

ID: Papaver23_contig00029456 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Papaver23_contig00029456
         (436 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002269241.1| PREDICTED: F-box protein At5g07610 [Vitis vi...    93   2e-17
ref|XP_002267226.1| PREDICTED: F-box protein At5g07610 [Vitis vi...    88   6e-16
ref|XP_002315369.1| f-box family protein [Populus trichocarpa] g...    80   2e-13
ref|XP_002526240.1| conserved hypothetical protein [Ricinus comm...    72   5e-11
ref|XP_002518070.1| conserved hypothetical protein [Ricinus comm...    70   2e-10

>ref|XP_002269241.1| PREDICTED: F-box protein At5g07610 [Vitis vinifera]
           gi|297743579|emb|CBI36446.3| unnamed protein product
           [Vitis vinifera]
          Length = 374

 Score = 93.2 bits (230), Expect = 2e-17
 Identities = 57/128 (44%), Positives = 75/128 (58%)
 Frame = -2

Query: 387 SAISIVANNTDLLSEILWRLPPKSLAVSKSVSKQWLSIISEPLFVQNYCLRKLLSVEGLF 208
           S+  IVA+N DLLSE+L RLP KSL   KSVSK WLS+I++P F +   L+         
Sbjct: 12  SSAHIVASNDDLLSELLLRLPIKSLLKFKSVSKHWLSLITDPHFSRRKNLK--------- 62

Query: 207 LTKCSSGVNQEIEYIVLDGKVTESAPVKTLTFVNVQASIRIEQSCNGLFCCSSTRSAVGQ 28
                + V+    ++ LD   T SAP  +LTFV+    I I QSCNGLFCCSS      +
Sbjct: 63  ----PNPVSALFSFVPLDPLQT-SAPFTSLTFVDHPRGIEILQSCNGLFCCSSVDYNDSE 117

Query: 27  PRYYVYSP 4
            +YY+Y+P
Sbjct: 118 RKYYIYNP 125


>ref|XP_002267226.1| PREDICTED: F-box protein At5g07610 [Vitis vinifera]
           gi|296090309|emb|CBI40128.3| unnamed protein product
           [Vitis vinifera]
          Length = 415

 Score = 88.2 bits (217), Expect = 6e-16
 Identities = 50/131 (38%), Positives = 70/131 (53%), Gaps = 2/131 (1%)
 Frame = -2

Query: 399 SLPLSAISI--VANNTDLLSEILWRLPPKSLAVSKSVSKQWLSIISEPLFVQNYCLRKLL 226
           + P+S  S   VA N DLL+EI  R P K L   +SVSK+WLS+IS+P F   +  R   
Sbjct: 21  NFPMSTSSAEQVAGNGDLLTEIFLRTPVKPLLRFRSVSKRWLSLISDPHFCHRHARRSSA 80

Query: 225 SVEGLFLTKCSSGVNQEIEYIVLDGKVTESAPVKTLTFVNVQASIRIEQSCNGLFCCSST 46
           SV G+ L       N   ++I  D K     P+++L F+     +++ Q CNGL CCS+ 
Sbjct: 81  SVPGVLL----GLPNSNFDFISFDEKKASEPPLRSLDFIGDPLGVKVLQVCNGLLCCSTV 136

Query: 45  RSAVGQPRYYV 13
           RS      YY+
Sbjct: 137 RSLGTSRNYYI 147


>ref|XP_002315369.1| f-box family protein [Populus trichocarpa]
           gi|222864409|gb|EEF01540.1| f-box family protein
           [Populus trichocarpa]
          Length = 406

 Score = 80.1 bits (196), Expect = 2e-13
 Identities = 46/126 (36%), Positives = 70/126 (55%), Gaps = 2/126 (1%)
 Frame = -2

Query: 375 IVANNTDLLSEILWRLPPKSLAVSKSVSKQWLSIISEPLFVQNYCLRK-LLSVEGLFLTK 199
           ++ +  D++ EIL RLP KSL +SK V + W  +IS+P+F+ NY  R     V G FL K
Sbjct: 31  MIMDEKDIMIEILHRLPLKSLLISKCVCRLWNHLISDPIFISNYSRRNPQHHVSGFFLQK 90

Query: 198 -CSSGVNQEIEYIVLDGKVTESAPVKTLTFVNVQASIRIEQSCNGLFCCSSTRSAVGQPR 22
                   ++E+I  +G+  ++AP  +L F+     + I+ SCNGL  CSS R      +
Sbjct: 91  FLFLEQYSKLEFITCEGQ-DDAAPEPSLCFIEDDQGVCIQHSCNGLLLCSSFRCHEDDRK 149

Query: 21  YYVYSP 4
           YY+  P
Sbjct: 150 YYICKP 155


>ref|XP_002526240.1| conserved hypothetical protein [Ricinus communis]
           gi|223534434|gb|EEF36137.1| conserved hypothetical
           protein [Ricinus communis]
          Length = 393

 Score = 72.0 bits (175), Expect = 5e-11
 Identities = 49/126 (38%), Positives = 70/126 (55%), Gaps = 2/126 (1%)
 Frame = -2

Query: 375 IVANNTDLLSEILWRLPPKSLAVSKSVSKQWLSIISEPLFVQNYCLRK-LLSVEGLFLTK 199
           I+ +N DL+++IL RLP K L   KSVSKQWLS+IS P F   + LR    ++  LFL  
Sbjct: 9   IIGSNEDLITQILLRLPVKPLLRFKSVSKQWLSLISTPHFSSLHTLRNPNHTISALFLRN 68

Query: 198 CSSGVNQEIEYIVLDGKVTESAPVKTLTFVNVQASIRIEQSCNGLFCCSSTRSAVGQPR- 22
                  E +++ L    + S+   +    ++   I+I QSCNGL  C ST   +GQ R 
Sbjct: 69  SP----LEFKFLSLSSSSSSSSSSASPLSFDLFHGIKILQSCNGLLLC-STLPKIGQKRN 123

Query: 21  YYVYSP 4
           YY+ +P
Sbjct: 124 YYISNP 129


>ref|XP_002518070.1| conserved hypothetical protein [Ricinus communis]
           gi|223542666|gb|EEF44203.1| conserved hypothetical
           protein [Ricinus communis]
          Length = 413

 Score = 69.7 bits (169), Expect = 2e-10
 Identities = 49/119 (41%), Positives = 63/119 (52%), Gaps = 5/119 (4%)
 Frame = -2

Query: 387 SAISIVANNTDLLSEILWRLPPKSLAVSKSVSKQWLSIISEPLFVQNYCLRKLLS----- 223
           S+   VAN+ D+L+EIL RLP   L   K VSKQWLS+IS+P+F   +    LL+     
Sbjct: 5   SSAETVANSVDILAEILLRLPITRLLRFKLVSKQWLSLISDPIFSLYHTRSHLLNSSSAI 64

Query: 222 VEGLFLTKCSSGVNQEIEYIVLDGKVTESAPVKTLTFVNVQASIRIEQSCNGLFCCSST 46
              LFL   SS   Q     + D  V    P      +N  A +RI+QSC+GL  CSST
Sbjct: 65  PSALFLHNPSSLARQTQLLSLTDVPVPSKLP-----NMNSGAPVRIKQSCSGLLLCSST 118


Top