BLASTX nr result

ID: Papaver23_contig00029445 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Papaver23_contig00029445
         (886 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_001769091.1| predicted protein [Physcomitrella patens sub...    61   4e-07
ref|XP_002871727.1| hypothetical protein ARALYDRAFT_488521 [Arab...    60   5e-07
ref|XP_001773126.1| predicted protein [Physcomitrella patens sub...    60   5e-07
ref|NP_197165.1| hydroxyproline-rich glycoprotein family protein...    60   5e-07
ref|XP_002282574.1| PREDICTED: protein TIC 40, chloroplastic [Vi...    59   1e-06

>ref|XP_001769091.1| predicted protein [Physcomitrella patens subsp. patens]
           gi|162679620|gb|EDQ66065.1| predicted protein
           [Physcomitrella patens subsp. patens]
          Length = 556

 Score = 60.8 bits (146), Expect = 4e-07
 Identities = 33/71 (46%), Positives = 43/71 (60%)
 Frame = +2

Query: 509 YLPEQMRNPETFKWMLQNPEYRQQLGDMLQVLQFLFKYAYHSNGMVLNFMQNCSNIDCQP 688
           YLPE+MRNP TFKWM+QNP+YRQQL DML  +     +    + M+ NF  N + +  Q 
Sbjct: 426 YLPEEMRNPTTFKWMMQNPQYRQQLQDMLNSMGGDGAWDNRMSDMLKNFDLNSTEVKQQ- 484

Query: 689 QYVLFKTGGLT 721
               F+  GLT
Sbjct: 485 ----FEQIGLT 491


>ref|XP_002871727.1| hypothetical protein ARALYDRAFT_488521 [Arabidopsis lyrata subsp.
           lyrata] gi|297317564|gb|EFH47986.1| hypothetical protein
           ARALYDRAFT_488521 [Arabidopsis lyrata subsp. lyrata]
          Length = 447

 Score = 60.5 bits (145), Expect = 5e-07
 Identities = 29/59 (49%), Positives = 37/59 (62%)
 Frame = +2

Query: 509 YLPEQMRNPETFKWMLQNPEYRQQLGDMLQVLQFLFKYAYHSNGMVLNFMQNCSNIDCQ 685
           YLPE+MRNPETFKWML+NP+YRQQL DML  +    ++       + NF  N   +  Q
Sbjct: 320 YLPEEMRNPETFKWMLKNPQYRQQLQDMLNNMSGSGEWDKRMTDTLKNFDLNSPEVKQQ 378


>ref|XP_001773126.1| predicted protein [Physcomitrella patens subsp. patens]
           gi|162675485|gb|EDQ61979.1| predicted protein
           [Physcomitrella patens subsp. patens]
          Length = 615

 Score = 60.5 bits (145), Expect = 5e-07
 Identities = 33/71 (46%), Positives = 43/71 (60%)
 Frame = +2

Query: 509 YLPEQMRNPETFKWMLQNPEYRQQLGDMLQVLQFLFKYAYHSNGMVLNFMQNCSNIDCQP 688
           YLPE+MRNP TFKWM+QNP+YRQQL DML  +     +    + M+ NF  N + +  Q 
Sbjct: 467 YLPEEMRNPTTFKWMMQNPQYRQQLQDMLNSMGGDGAWDNRMSDMLNNFDLNSTEVKQQ- 525

Query: 689 QYVLFKTGGLT 721
               F+  GLT
Sbjct: 526 ----FEQIGLT 532


>ref|NP_197165.1| hydroxyproline-rich glycoprotein family protein [Arabidopsis
           thaliana] gi|75309208|sp|Q9FMD5.1|TIC40_ARATH RecName:
           Full=Protein TIC 40, chloroplastic; AltName:
           Full=Protein PIGMENT DEFECTIVE EMBRYO 120; AltName:
           Full=Translocon at the inner envelope membrane of
           chloroplasts 40; Short=AtTIC40; Flags: Precursor
           gi|16226313|gb|AAL16131.1|AF428299_1 AT5g16620/MTG13_6
           [Arabidopsis thaliana] gi|10176971|dbj|BAB10189.1|
           translocon Tic40-like protein [Arabidopsis thaliana]
           gi|20260222|gb|AAM13009.1| translocon Tic40-like protein
           [Arabidopsis thaliana] gi|30387547|gb|AAP31939.1|
           At5g16620 [Arabidopsis thaliana]
           gi|332004935|gb|AED92318.1| hydroxyproline-rich
           glycoprotein family protein [Arabidopsis thaliana]
          Length = 447

 Score = 60.5 bits (145), Expect = 5e-07
 Identities = 29/59 (49%), Positives = 37/59 (62%)
 Frame = +2

Query: 509 YLPEQMRNPETFKWMLQNPEYRQQLGDMLQVLQFLFKYAYHSNGMVLNFMQNCSNIDCQ 685
           YLPE+MRNPETFKWML+NP+YRQQL DML  +    ++       + NF  N   +  Q
Sbjct: 320 YLPEEMRNPETFKWMLKNPQYRQQLQDMLNNMSGSGEWDKRMTDTLKNFDLNSPEVKQQ 378


>ref|XP_002282574.1| PREDICTED: protein TIC 40, chloroplastic [Vitis vinifera]
           gi|296089465|emb|CBI39284.3| unnamed protein product
           [Vitis vinifera]
          Length = 436

 Score = 59.3 bits (142), Expect = 1e-06
 Identities = 25/29 (86%), Positives = 27/29 (93%)
 Frame = +2

Query: 509 YLPEQMRNPETFKWMLQNPEYRQQLGDML 595
           YLPE+MRNP TFKWMLQNP+YRQQL DML
Sbjct: 307 YLPEEMRNPTTFKWMLQNPQYRQQLQDML 335


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