BLASTX nr result

ID: Papaver23_contig00029433 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Papaver23_contig00029433
         (745 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002307035.1| histone deacetylase [Populus trichocarpa] gi...    65   1e-08
ref|XP_003630282.1| Histone deacetylase [Medicago truncatula] gi...    63   6e-08
ref|XP_002267516.1| PREDICTED: histone deacetylase 14 [Vitis vin...    61   2e-07
dbj|BAK01741.1| predicted protein [Hordeum vulgare subsp. vulgare]     59   8e-07
ref|NP_001066322.1| Os12g0182700 [Oryza sativa Japonica Group] g...    59   1e-06

>ref|XP_002307035.1| histone deacetylase [Populus trichocarpa]
           gi|222856484|gb|EEE94031.1| histone deacetylase [Populus
           trichocarpa]
          Length = 390

 Score = 65.5 bits (158), Expect = 1e-08
 Identities = 38/66 (57%), Positives = 45/66 (68%), Gaps = 3/66 (4%)
 Frame = -1

Query: 412 SGYPISCSSSVAKDA---QKPDSRVICCLPSAMGHNQEARPKSNFRVLAIMSALEKLELT 242
           SG+ ISCS S+ KD    +  D+RVI  +  AMGHNQEA P+S  RV AI+SALEK ELT
Sbjct: 8   SGFSISCSYSLDKDPLIEKLTDARVIYSVAPAMGHNQEAHPESYLRVPAIVSALEKAELT 67

Query: 241 SKVTAS 224
           SK   S
Sbjct: 68  SKFRGS 73


>ref|XP_003630282.1| Histone deacetylase [Medicago truncatula]
           gi|355524304|gb|AET04758.1| Histone deacetylase
           [Medicago truncatula]
          Length = 420

 Score = 63.2 bits (152), Expect = 6e-08
 Identities = 33/81 (40%), Positives = 52/81 (64%)
 Frame = -1

Query: 466 NHYRHAVENNIFKLERSVSGYPISCSSSVAKDAQKPDSRVICCLPSAMGHNQEARPKSNF 287
           NH+ +  +N+  K+ +   G  I CSS V    Q   +R+I  +  +MGHNQE+ P+S+F
Sbjct: 23  NHHVNKWKNHRHKVVKKCLGASIYCSSDVPSIQQLSHARLIYSVAPSMGHNQESHPESHF 82

Query: 286 RVLAIMSALEKLELTSKVTAS 224
           RV AI++AL++++LTSK   S
Sbjct: 83  RVPAIVTALQQMKLTSKFRGS 103


>ref|XP_002267516.1| PREDICTED: histone deacetylase 14 [Vitis vinifera]
           gi|296088531|emb|CBI37522.3| unnamed protein product
           [Vitis vinifera]
          Length = 437

 Score = 61.2 bits (147), Expect = 2e-07
 Identities = 31/53 (58%), Positives = 41/53 (77%)
 Frame = -1

Query: 400 ISCSSSVAKDAQKPDSRVICCLPSAMGHNQEARPKSNFRVLAIMSALEKLELT 242
           +SCS  V   ++  D+RVI C+  AMGHNQE+ P+SNFRV AI+SALEK+EL+
Sbjct: 63  VSCSL-VPSTSELSDARVIYCVAPAMGHNQESHPESNFRVPAIVSALEKMELS 114


>dbj|BAK01741.1| predicted protein [Hordeum vulgare subsp. vulgare]
          Length = 444

 Score = 59.3 bits (142), Expect = 8e-07
 Identities = 33/66 (50%), Positives = 43/66 (65%), Gaps = 5/66 (7%)
 Frame = -1

Query: 418 SVSGYPISCSSSVAKDAQKP-----DSRVICCLPSAMGHNQEARPKSNFRVLAIMSALEK 254
           S +G  +S  +   KD+  P     D+R++ C   AMGHN+EA P+SN RV AI+ ALEK
Sbjct: 58  SHNGASVSHVNGAPKDSPLPGSLLRDARILYCASPAMGHNKEAHPESNKRVPAIVDALEK 117

Query: 253 LELTSK 236
           LELTSK
Sbjct: 118 LELTSK 123


>ref|NP_001066322.1| Os12g0182700 [Oryza sativa Japonica Group]
           gi|77553168|gb|ABA95964.1| Histone deacetylase family
           protein, expressed [Oryza sativa Japonica Group]
           gi|113648829|dbj|BAF29341.1| Os12g0182700 [Oryza sativa
           Japonica Group] gi|215704191|dbj|BAG93031.1| unnamed
           protein product [Oryza sativa Japonica Group]
           gi|222616744|gb|EEE52876.1| hypothetical protein
           OsJ_35446 [Oryza sativa Japonica Group]
          Length = 443

 Score = 58.5 bits (140), Expect = 1e-06
 Identities = 33/66 (50%), Positives = 43/66 (65%), Gaps = 5/66 (7%)
 Frame = -1

Query: 418 SVSGYPISCSSSVAKDAQKPDS-----RVICCLPSAMGHNQEARPKSNFRVLAIMSALEK 254
           S +G  IS ++ V KD   PD+      ++ C   AMGHN+EA P++N RV AI+ ALEK
Sbjct: 57  SHNGTSISDTNGVRKDLALPDNLLRDAHILYCTSPAMGHNKEAHPETNKRVPAIVDALEK 116

Query: 253 LELTSK 236
           LELTSK
Sbjct: 117 LELTSK 122


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