BLASTX nr result

ID: Papaver23_contig00029422 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Papaver23_contig00029422
         (689 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_003634944.1| PREDICTED: pentatricopeptide repeat-containi...   246   2e-63
ref|XP_002525536.1| pentatricopeptide repeat-containing protein,...   206   5e-51
ref|XP_002468625.1| hypothetical protein SORBIDRAFT_01g049260 [S...   200   2e-49
ref|NP_001167893.1| uncharacterized protein LOC100381604 [Zea ma...   200   3e-49
ref|XP_004141361.1| PREDICTED: pentatricopeptide repeat-containi...   192   5e-47

>ref|XP_003634944.1| PREDICTED: pentatricopeptide repeat-containing protein At5g16420,
           mitochondrial-like [Vitis vinifera]
          Length = 582

 Score =  246 bits (629), Expect = 2e-63
 Identities = 122/205 (59%), Positives = 155/205 (75%), Gaps = 2/205 (0%)
 Frame = -1

Query: 689 SYYNVLVWAKCRGSEFQEARELFDEMRRYGCYPNSNTYNYLLGSLCKDGRIGEACSLVEV 510
           SYYN+LV   CR   F+EAR+L DEMR +GC PN+ TYNYLL SLCK+ R  EAC+++E 
Sbjct: 370 SYYNILVREMCRKCNFKEARDLLDEMRLFGCRPNAKTYNYLLSSLCKNNRDDEACNVLEE 429

Query: 509 MNELGYMPDAITFEIFIFHACRQDRLDFAMEFLNQMISGGLEPRLTTHAAFIKGYFNSNR 330
           M E G  PDA+TFEIFI++  R  +LDFA++FL+QM+S GLEPRLTTHAAFIKGYF+S R
Sbjct: 430 MQEAGCPPDALTFEIFIYYTYRLGKLDFAIKFLDQMVSRGLEPRLTTHAAFIKGYFHSRR 489

Query: 329 LQEAYNFVVDMSVKYKYSGNVNFSLLASLHHKKGKLLDARDILVCMIEKGLKPNFPVYVK 150
            +EAY +VVD  V YK+  N+ +SLLASLH + G L+ A+ IL+ MIEKGLKPNF VY +
Sbjct: 490 YEEAYEYVVDSGVTYKWPSNMIYSLLASLHQRNGNLISAQKILIEMIEKGLKPNFSVYKR 549

Query: 149 VSK--NKAGMSHLAADLKSRLSKLN 81
           V +  +K+G   LA DL+SR S L+
Sbjct: 550 VLEHLDKSGREDLAGDLRSRFSSLS 574


>ref|XP_002525536.1| pentatricopeptide repeat-containing protein, putative [Ricinus
           communis] gi|223535215|gb|EEF36894.1| pentatricopeptide
           repeat-containing protein, putative [Ricinus communis]
          Length = 430

 Score =  206 bits (523), Expect = 5e-51
 Identities = 101/204 (49%), Positives = 147/204 (72%), Gaps = 2/204 (0%)
 Frame = -1

Query: 689 SYYNVLVWAKCRGSEFQEARELFDEMRRYGCYPNSNTYNYLLGSLCKDGRIGEACSLVEV 510
           SYYNVL+   CR  +F+ AR+L DE+ + GC P+++TYNY++ SL K+G+  +AC + + 
Sbjct: 225 SYYNVLIRELCRRGDFKAARDLMDEIGKEGCNPSAHTYNYIISSLLKNGKNADACEVFQE 284

Query: 509 MNELGYMPDAITFEIFIFHACRQDRLDFAMEFLNQMISGGLEPRLTTHAAFIKGYFNSNR 330
           M +    PDA+TFEIFI+++C + +LD A EF + M++ GLEPRL THAAFIKG+FNS +
Sbjct: 285 MQDNDCPPDALTFEIFIYNSCNEGKLDNAFEFFDDMVARGLEPRLLTHAAFIKGFFNSQQ 344

Query: 329 LQEAYNFVVDMSVKYKYSGNVNFSLLASLHHKKGKLLDARDILVCMIEKGLKPNFPVYVK 150
            ++AY +VV      KYS NVN+SLLA+LH K+G L+DA +IL  MI+KGL+P+F V++K
Sbjct: 345 YEKAYKYVVGSD--DKYSSNVNYSLLANLHQKQGNLVDAENILSEMIKKGLRPHFNVFMK 402

Query: 149 VSKN--KAGMSHLAADLKSRLSKL 84
           V K+  K+G   LA  L+ +  +L
Sbjct: 403 VKKHLMKSGNEELATSLQKKFLQL 426


>ref|XP_002468625.1| hypothetical protein SORBIDRAFT_01g049260 [Sorghum bicolor]
           gi|241922479|gb|EER95623.1| hypothetical protein
           SORBIDRAFT_01g049260 [Sorghum bicolor]
          Length = 422

 Score =  200 bits (509), Expect = 2e-49
 Identities = 100/206 (48%), Positives = 144/206 (69%), Gaps = 4/206 (1%)
 Frame = -1

Query: 686 YYNVLVWAKCRGSEFQEARELFDEMRRYGCYPNSNTYNYLLGSLCKDGRIGEACSLVEVM 507
           YYNVLV AKC+  +F  ARE+FDEMR+ G  P++NT+NYLLG L K+GR+ EAC LVE M
Sbjct: 210 YYNVLVAAKCKAGDFVGAREVFDEMRKSGSDPDANTWNYLLGCLLKNGRLAEACGLVEAM 269

Query: 506 NEL--GYMPDAITFEIFIFHACRQDRLDFAMEFLNQMISGGLEPRLTTHAAFIKGYFNSN 333
             L    +P+++T+EI  +HAC+  ++D AM+ LNQM S  L PR+T H+AFIKGYF + 
Sbjct: 270 ERLKCSEIPNSLTYEILTYHACKAGKMDSAMQILNQMFSENLTPRITIHSAFIKGYFYAG 329

Query: 332 RLQEAYNFVVDMSVKYKYSGNVNFSLLASLHHKKGKLLDARDILVCMIEKGLKPNFPVYV 153
           R+++A  +V DMS + ++S N N+SLLA L  K G+ +DA  +L  +++KGL+P+   YV
Sbjct: 330 RIEDACKYVNDMSTRDRHSVNRNYSLLAKLLRKSGRTVDAGRVLYELMDKGLRPDHSAYV 389

Query: 152 KVSK--NKAGMSHLAADLKSRLSKLN 81
           KV+K  +K G   LA++LK    + +
Sbjct: 390 KVAKDLHKMGRGDLASELKMMFQRFS 415


>ref|NP_001167893.1| uncharacterized protein LOC100381604 [Zea mays]
           gi|223944699|gb|ACN26433.1| unknown [Zea mays]
           gi|414864420|tpg|DAA42977.1| TPA: hypothetical protein
           ZEAMMB73_690405 [Zea mays]
          Length = 430

 Score =  200 bits (508), Expect = 3e-49
 Identities = 101/206 (49%), Positives = 142/206 (68%), Gaps = 4/206 (1%)
 Frame = -1

Query: 686 YYNVLVWAKCRGSEFQEARELFDEMRRYGCYPNSNTYNYLLGSLCKDGRIGEACSLVEVM 507
           YYNVLV AKC+  +F  ARE+FDEMRR G  P++NT+NYLLG L K GR+ EAC LVE M
Sbjct: 210 YYNVLVAAKCKAGDFVGAREVFDEMRRSGSDPDANTWNYLLGCLLKKGRLAEACGLVEAM 269

Query: 506 NEL--GYMPDAITFEIFIFHACRQDRLDFAMEFLNQMISGGLEPRLTTHAAFIKGYFNSN 333
             L    +P ++T+EI  +HAC+  ++D AM+ L+QM S  L PR+T H+AFIKGYF + 
Sbjct: 270 ERLKRSEIPSSLTYEILTYHACKAGKMDSAMQILDQMFSENLTPRITIHSAFIKGYFYAG 329

Query: 332 RLQEAYNFVVDMSVKYKYSGNVNFSLLASLHHKKGKLLDARDILVCMIEKGLKPNFPVYV 153
           R+++A  +V DMS + ++S N N+SLLA L  K G+ +DA  +L  ++EKGL+P+   YV
Sbjct: 330 RIEDACKYVSDMSTRDRHSVNRNYSLLAKLLWKSGRTIDAGRVLYELMEKGLRPDHSAYV 389

Query: 152 KVSK--NKAGMSHLAADLKSRLSKLN 81
           KV+K  +K G  +LA +LK    + +
Sbjct: 390 KVAKDLHKMGKGNLACELKMMFQRFS 415


>ref|XP_004141361.1| PREDICTED: pentatricopeptide repeat-containing protein At1g05670,
           mitochondrial-like [Cucumis sativus]
           gi|449498723|ref|XP_004160616.1| PREDICTED:
           pentatricopeptide repeat-containing protein At1g05670,
           mitochondrial-like [Cucumis sativus]
          Length = 494

 Score =  192 bits (488), Expect = 5e-47
 Identities = 97/210 (46%), Positives = 142/210 (67%), Gaps = 4/210 (1%)
 Frame = -1

Query: 689 SYYNVLVWAKCRGSEFQEARELFDEMRRYGCYPNSNTYNYLLGSLCKDGRIGEACSLVEV 510
           S+Y ++V  KC+  +F+ AR   DEMR+ GC P++   NYLL SLCK+ + GEA +L+E 
Sbjct: 282 SFYYIIVREKCKQKDFEGARCTLDEMRQVGCIPDAGILNYLLSSLCKNDKFGEAHNLLEE 341

Query: 509 MNELGYMPDAITFEIFIFHACRQDRLDFAMEFLNQMISGGLEPRLTTHAAFIKGYFNSNR 330
           M E    P+++TFEI I H C+   ++ A+ +L+ M++GGL PRL+THAAF+K YF+S R
Sbjct: 342 MLEQNCSPNSLTFEIIICHLCKIGNIESALGYLDMMVAGGLMPRLSTHAAFVKSYFSSQR 401

Query: 329 LQEAYNFVVDMSVKYKYSGNVNFSLLASLHHKKGKLLDARDILVCMIEKGLKPNFPVYVK 150
            +EAY + VD S+KY  + N  +SLLA+LH K+G L+DA+ IL  +++ GLKP+F VY +
Sbjct: 402 YEEAYQYAVDSSLKYVTTQNATYSLLATLHEKRGNLVDAQKILSELMDAGLKPHFHVYTR 461

Query: 149 VSK--NKAGMSHLAADLKSRLS--KLNSGL 72
           + K     G   LA DLK ++S   L SG+
Sbjct: 462 LLKKLQVQGRGDLANDLKRKISNVSLQSGI 491


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