BLASTX nr result

ID: Papaver23_contig00029363 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Papaver23_contig00029363
         (424 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

emb|CBI17870.3| unnamed protein product [Vitis vinifera]               72   6e-11
ref|XP_002267344.1| PREDICTED: RING-H2 finger protein ATL43-like...    72   6e-11
ref|XP_002511366.1| ring finger protein, putative [Ricinus commu...    70   2e-10
ref|XP_003602920.1| RING zinc finger protein-like protein [Medic...    68   9e-10
ref|NP_196200.2| RING-H2 finger protein ATL43 [Arabidopsis thali...    62   4e-08

>emb|CBI17870.3| unnamed protein product [Vitis vinifera]
          Length = 457

 Score = 71.6 bits (174), Expect = 6e-11
 Identities = 52/133 (39%), Positives = 70/133 (52%)
 Frame = +3

Query: 3   SIGCFDRGGYRKDGLLMMMPSRNXXXXXXXXXLKPITTIADNTDRESFVRRFEHRIIALP 182
           ++GCFDR   RKD LL+                        + DR SF RR +HRII   
Sbjct: 262 AVGCFDRP--RKDELLLT-----------------------SEDRNSFERRLDHRIIVSA 296

Query: 183 SRQRGELFKHRWSDLRPSDMLLLKAKMIKKEMTVARREQEEGKMAVNRNDDDNLSGRNVI 362
           +   G  F  RWSD++PSD+L L+++MI  +    R     G +     +  + SGR+VI
Sbjct: 297 AGSGG--FHQRWSDVQPSDLLYLRSEMIISDNR--RLSSCHGTI-----EGGSWSGRSVI 347

Query: 363 NSRSVSEITGISR 401
           NSRSVSEITG+SR
Sbjct: 348 NSRSVSEITGLSR 360


>ref|XP_002267344.1| PREDICTED: RING-H2 finger protein ATL43-like [Vitis vinifera]
          Length = 404

 Score = 71.6 bits (174), Expect = 6e-11
 Identities = 52/133 (39%), Positives = 70/133 (52%)
 Frame = +3

Query: 3   SIGCFDRGGYRKDGLLMMMPSRNXXXXXXXXXLKPITTIADNTDRESFVRRFEHRIIALP 182
           ++GCFDR   RKD LL+                        + DR SF RR +HRII   
Sbjct: 262 AVGCFDRP--RKDELLLT-----------------------SEDRNSFERRLDHRIIVSA 296

Query: 183 SRQRGELFKHRWSDLRPSDMLLLKAKMIKKEMTVARREQEEGKMAVNRNDDDNLSGRNVI 362
           +   G  F  RWSD++PSD+L L+++MI  +    R     G +     +  + SGR+VI
Sbjct: 297 AGSGG--FHQRWSDVQPSDLLYLRSEMIISDNR--RLSSCHGTI-----EGGSWSGRSVI 347

Query: 363 NSRSVSEITGISR 401
           NSRSVSEITG+SR
Sbjct: 348 NSRSVSEITGLSR 360


>ref|XP_002511366.1| ring finger protein, putative [Ricinus communis]
           gi|223550481|gb|EEF51968.1| ring finger protein,
           putative [Ricinus communis]
          Length = 493

 Score = 69.7 bits (169), Expect = 2e-10
 Identities = 56/156 (35%), Positives = 78/156 (50%), Gaps = 21/156 (13%)
 Frame = +3

Query: 3   SIGCFDR--GGYRKDGLLMMMPSRNXXXXXXXXX----LKPITTIADNTDRESFV--RRF 158
           ++GCFDR     RKDGLL++  + N              +  +T + N    + V   RF
Sbjct: 299 AVGCFDRYQSHQRKDGLLLLTNNSNGDGDSDGDDHSLESRRTSTASVNAGAGAGVDKTRF 358

Query: 159 EHRIIALPSRQRGELFKHRWSDLRPSDMLLLKAKMIKKEM-----------TVARRE--Q 299
           EHRII       G     RWSD+ PSD+L L+++MI  +            +V RR+  Q
Sbjct: 359 EHRIIV-----SGNASDERWSDVHPSDLLYLRSEMILSDNRRFSMTSGSRPSVGRRQHHQ 413

Query: 300 EEGKMAVNRNDDDNLSGRNVINSRSVSEITGISRFS 407
           ++    V     D   GR+VIN RSVSEITG++RFS
Sbjct: 414 KQQNAVVKGPSSD---GRSVINGRSVSEITGLNRFS 446


>ref|XP_003602920.1| RING zinc finger protein-like protein [Medicago truncatula]
           gi|355491968|gb|AES73171.1| RING zinc finger
           protein-like protein [Medicago truncatula]
          Length = 402

 Score = 67.8 bits (164), Expect = 9e-10
 Identities = 51/137 (37%), Positives = 67/137 (48%), Gaps = 4/137 (2%)
 Frame = +3

Query: 6   IGCFDRGGYRKDGLLMMMPSRNXXXXXXXXXLKPITTIADNTDRESFVRR-FEHRIIALP 182
           +GCF   G RKDG+L+                    T  +   R S  RR  EHRII  P
Sbjct: 283 LGCFVGPGPRKDGMLLTKEE----------------TETERRRRSSVERRRLEHRIIVSP 326

Query: 183 S--RQRGELFKH-RWSDLRPSDMLLLKAKMIKKEMTVARREQEEGKMAVNRNDDDNLSGR 353
           S    R  L K+ RWSD+   D+L L ++M+            E +   +RN+D + +GR
Sbjct: 327 SITNIRSGLHKNQRWSDVEACDLLYLTSEMMI---------MSESRRVKHRNNDSSWNGR 377

Query: 354 NVINSRSVSEITGISRF 404
            VIN RSVSEITG +RF
Sbjct: 378 GVINERSVSEITGFTRF 394


>ref|NP_196200.2| RING-H2 finger protein ATL43 [Arabidopsis thaliana]
           gi|58743300|gb|AAW81728.1| At5g05810 [Arabidopsis
           thaliana] gi|61656157|gb|AAX49381.1| At5g05810
           [Arabidopsis thaliana] gi|332003545|gb|AED90928.1|
           RING-H2 finger protein ATL43 [Arabidopsis thaliana]
          Length = 353

 Score = 62.4 bits (150), Expect = 4e-08
 Identities = 49/137 (35%), Positives = 64/137 (46%)
 Frame = +3

Query: 3   SIGCFDRGGYRKDGLLMMMPSRNXXXXXXXXXLKPITTIADNTDRESFVRRFEHRIIALP 182
           ++ C DR   RKDGLL++                         +RESF  RFEHRII   
Sbjct: 232 AVNCLDRL-QRKDGLLLI------------------------PNRESFEGRFEHRIII-- 264

Query: 183 SRQRGELFKHRWSDLRPSDMLLLKAKMIKKEMTVARREQEEGKMAVNRNDDDNLSGRNVI 362
               G     RWS++RPSD+L L+++MI  +           K+A          GR+VI
Sbjct: 265 --SGGNRDDQRWSEVRPSDLLYLRSEMILSDCR---------KLAAAEG------GRDVI 307

Query: 363 NSRSVSEITGISRFS*W 413
           N RSVSE+TGI R   W
Sbjct: 308 NGRSVSELTGIERRRRW 324


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