BLASTX nr result

ID: Papaver23_contig00029323 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Papaver23_contig00029323
         (647 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002307225.1| predicted protein [Populus trichocarpa] gi|2...   166   3e-39
gb|ABA98861.1| retrotransposon protein, putative, Ty1-copia subc...   125   7e-27
gb|AAP53866.2| retrotransposon protein, putative, Ty1-copia subc...   124   1e-26
emb|CAE04897.3| OSJNBa0042I15.19 [Oryza sativa Japonica Group]        122   6e-26
gb|ABA96825.1| retrotransposon protein, putative, Ty1-copia subc...   122   7e-26

>ref|XP_002307225.1| predicted protein [Populus trichocarpa] gi|222856674|gb|EEE94221.1|
           predicted protein [Populus trichocarpa]
          Length = 279

 Score =  166 bits (421), Expect = 3e-39
 Identities = 71/180 (39%), Positives = 127/180 (70%)
 Frame = +2

Query: 104 SQLKVEKFTGTNNFGLWRTDVMDALVHLDLEEALEVQPVEMSEKKWNKMNKLCLASIRGC 283
           ++ +VEKF G  NFG+W+ + MD LV ++L+  LE +P ++ +K W ++N L  +SIR C
Sbjct: 25  TKFEVEKFDGKGNFGMWKCEDMDMLVQINLDFTLEDKPEDLDDKSWERINWLACSSIRLC 84

Query: 284 LATTVRVNYQHETSAKDLWEKLEKEYLVKNVAHRIHLKRNLYRYNMKRGATLTEHLDSYN 463
           L    +  +  + SAK LW+ LE +++ K++ +R++LK+ ++R+  K+G ++ EHL+ +N
Sbjct: 85  LVKDQKYTFSEQNSAKKLWQALEDKFMKKSIENRLYLKKRIFRFQHKKGTSMNEHLNDFN 144

Query: 464 KLLAELVNYDEKINDEEQALCLINSLPEKYEPVIKALMHGKDKMTYAEVTTALRSEEFRK 643
           K+ A+L N D +I+DE++AL L+NSLP+ YE ++  L++GK+K+ + +V+ AL + E+RK
Sbjct: 145 KMTADLKNLDVEIDDEDKALLLLNSLPDIYEHLVTTLLYGKEKIKFIDVSNALVNNEYRK 204


>gb|ABA98861.1| retrotransposon protein, putative, Ty1-copia subclass [Oryza sativa
           Japonica Group]
          Length = 425

 Score =  125 bits (314), Expect = 7e-27
 Identities = 64/181 (35%), Positives = 106/181 (58%), Gaps = 1/181 (0%)
 Frame = +2

Query: 104 SQLKVEKFTGTNNFGLWRTDVMDALVHLDLEEALE-VQPVEMSEKKWNKMNKLCLASIRG 280
           S+ +V KF GT NF LW+  + D L    + +ALE   P +M   KW +M     A+IR 
Sbjct: 7   SKFEVVKFDGTGNFILWQMRLKDLLAQQGISKALEETMPEKMDAGKWEEMKAQAAATIRL 66

Query: 281 CLATTVRVNYQHETSAKDLWEKLEKEYLVKNVAHRIHLKRNLYRYNMKRGATLTEHLDSY 460
            L+ +V      E + K++W+KL   Y+ K++  +++LK+ LY   M+  + L +H+D +
Sbjct: 67  SLSDSVMYPVMDEKTPKEIWDKLASLYMSKSLTSKLYLKQQLYGLQMQEESDLRKHVDVF 126

Query: 461 NKLLAELVNYDEKINDEEQALCLINSLPEKYEPVIKALMHGKDKMTYAEVTTALRSEEFR 640
           N+L+ +L   D K++DE+ A+ L+ SLP  YE V+  LMHGKD +   E  ++L + + R
Sbjct: 127 NQLVVDLSKLDVKLDDEDMAIILLCSLPPSYEHVVTTLMHGKDTVKTEEKISSLLARDLR 186

Query: 641 K 643
           +
Sbjct: 187 R 187


>gb|AAP53866.2| retrotransposon protein, putative, Ty1-copia subclass [Oryza sativa
           Japonica Group]
          Length = 415

 Score =  124 bits (312), Expect = 1e-26
 Identities = 62/181 (34%), Positives = 108/181 (59%), Gaps = 1/181 (0%)
 Frame = +2

Query: 104 SQLKVEKFTGTNNFGLWRTDVMDALVHLDLEEAL-EVQPVEMSEKKWNKMNKLCLASIRG 280
           S+ +V KF GT NF LW+  + D L    + +AL E  P ++   KWN+M     A+IR 
Sbjct: 7   SKFEVVKFDGTGNFVLWQMRLKDLLAQQGISKALQETMPEKIDADKWNEMKAQAAATIRL 66

Query: 281 CLATTVRVNYQHETSAKDLWEKLEKEYLVKNVAHRIHLKRNLYRYNMKRGATLTEHLDSY 460
            L+ +V      E S K++W+KL   ++ K++  +++LK+ LY   ++  + L +H+D +
Sbjct: 67  SLSDSVMYQVMDEKSPKEIWDKLASLHMSKSLTSKLYLKQQLYGLQVQEESDLRKHVDVF 126

Query: 461 NKLLAELVNYDEKINDEEQALCLINSLPEKYEPVIKALMHGKDKMTYAEVTTALRSEEFR 640
           N+L+ +L   D K++DE++A+ L+ SLP  YE V+  L HGKD +   E+ ++L + + R
Sbjct: 127 NQLVVDLSKLDVKLDDEDKAIILLCSLPLSYEHVVTTLTHGKDTVKTEEIISSLLARDLR 186

Query: 641 K 643
           +
Sbjct: 187 R 187


>emb|CAE04897.3| OSJNBa0042I15.19 [Oryza sativa Japonica Group]
          Length = 478

 Score =  122 bits (306), Expect = 6e-26
 Identities = 60/156 (38%), Positives = 99/156 (63%), Gaps = 1/156 (0%)
 Frame = +2

Query: 122 KFTGTNNFGLWRTDVMDALVHLDLEEALE-VQPVEMSEKKWNKMNKLCLASIRGCLATTV 298
           KF G  NFGLW+T V D L   ++ +AL+ V+P +M +    +M     A+IR CL+  +
Sbjct: 94  KFDGFGNFGLWQTRVKDLLAQQEVSKALKGVKPAKMEDDDCEEMQLQAAATIRRCLSDQI 153

Query: 299 RVNYQHETSAKDLWEKLEKEYLVKNVAHRIHLKRNLYRYNMKRGATLTEHLDSYNKLLAE 478
             +   ETS K +WEKLE +++ K + ++ +LK+ LY   M+ GA LT H++ +N+L+ +
Sbjct: 154 MYHVMEETSPKIIWEKLEAQFMSKTLTNKRYLKQKLYGLKMQEGADLTAHVNVFNQLVTD 213

Query: 479 LVNYDEKINDEEQALCLINSLPEKYEPVIKALMHGK 586
           LV  D +++DE++A+ L+ SLPE YE V++    G+
Sbjct: 214 LVKMDVEVDDEDKAIVLLCSLPESYEHVMRKNKEGE 249


>gb|ABA96825.1| retrotransposon protein, putative, Ty1-copia subclass [Oryza sativa
           Japonica Group]
          Length = 424

 Score =  122 bits (305), Expect = 7e-26
 Identities = 63/181 (34%), Positives = 107/181 (59%), Gaps = 1/181 (0%)
 Frame = +2

Query: 104 SQLKVEKFTGTNNFGLWRTDVMDALVHLDLEEALE-VQPVEMSEKKWNKMNKLCLASIRG 280
           S+ +V KF GT NF LW+  + D L    + +ALE   P +M   KW +M     A+IR 
Sbjct: 7   SKFEVVKFDGTGNFVLWQMRLKDLLAQQGISKALEETMPEKMDAGKWEEMKAQAAATIRL 66

Query: 281 CLATTVRVNYQHETSAKDLWEKLEKEYLVKNVAHRIHLKRNLYRYNMKRGATLTEHLDSY 460
            L+ +V      E ++K++W KL   Y+ K++  +++LK+ LY   M+  + L +H+D +
Sbjct: 67  SLSDSVMYQVMDEKTSKEIWVKLTSLYMSKSLTSKLYLKQQLYGLQMQEESDLRKHVDVF 126

Query: 461 NKLLAELVNYDEKINDEEQALCLINSLPEKYEPVIKALMHGKDKMTYAEVTTALRSEEFR 640
           N+L+ +L   D K++DE++A+ L+ SLP  YE V+  L HGKD +   E+ ++L + + R
Sbjct: 127 NQLVVDLSKLDVKLDDEDKAIILLCSLPPSYEHVVTILTHGKDTIK-TEIISSLLARDLR 185

Query: 641 K 643
           +
Sbjct: 186 R 186


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