BLASTX nr result

ID: Papaver23_contig00029298 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Papaver23_contig00029298
         (571 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002882101.1| hypothetical protein ARALYDRAFT_904175 [Arab...   170   1e-40
ref|NP_182225.3| Peptide chain release factor 1 [Arabidopsis tha...   169   4e-40
ref|XP_003520768.1| PREDICTED: peptide chain release factor 1-li...   163   2e-38
ref|XP_002274067.1| PREDICTED: peptide chain release factor 1 [V...   162   4e-38
emb|CAN67129.1| hypothetical protein VITISV_040170 [Vitis vinifera]   159   2e-37

>ref|XP_002882101.1| hypothetical protein ARALYDRAFT_904175 [Arabidopsis lyrata subsp.
           lyrata] gi|297327940|gb|EFH58360.1| hypothetical protein
           ARALYDRAFT_904175 [Arabidopsis lyrata subsp. lyrata]
          Length = 410

 Score =  170 bits (431), Expect = 1e-40
 Identities = 84/128 (65%), Positives = 111/128 (86%)
 Frame = -2

Query: 384 SSLIRSYSSGLDIQLSSDMIRIMEKRLTTIEYKSKYLENILNQPEASPTDYSQANKELRK 205
           S +IR Y++G++ QLS D+I+IM++RL+ IE+++  L+ ++NQPE SP ++S+ANKELRK
Sbjct: 31  SKMIRLYTTGMEPQLSPDLIKIMDQRLSAIEHRNALLQKLINQPEYSPEEFSRANKELRK 90

Query: 204 LRDSMDLINDLRAKQKEIDGLKSLIAESSEDKDMYDMANAELGEATEDEKRIQQLLLKSM 25
           LRDSM LINDLRAKQKEIDGLKSL++ESS+DKDM DMA +EL EA E+EKR+Q LLLKS+
Sbjct: 91  LRDSMFLINDLRAKQKEIDGLKSLVSESSDDKDMLDMAVSELDEAVEEEKRLQTLLLKSL 150

Query: 24  LLKDDADE 1
           L KD+ADE
Sbjct: 151 LPKDEADE 158


>ref|NP_182225.3| Peptide chain release factor 1 [Arabidopsis thaliana]
           gi|124301088|gb|ABN04796.1| At2g47020 [Arabidopsis
           thaliana] gi|330255695|gb|AEC10789.1| Peptide chain
           release factor 1 [Arabidopsis thaliana]
          Length = 413

 Score =  169 bits (427), Expect = 4e-40
 Identities = 83/128 (64%), Positives = 111/128 (86%)
 Frame = -2

Query: 384 SSLIRSYSSGLDIQLSSDMIRIMEKRLTTIEYKSKYLENILNQPEASPTDYSQANKELRK 205
           S++IR Y++G++ QLS D+I+IM++RL+ IE+++  L+ ++NQPE SP ++S+ANKELRK
Sbjct: 34  SNMIRLYTTGMEPQLSPDLIKIMDQRLSAIEHRNAVLQKLINQPEYSPEEFSRANKELRK 93

Query: 204 LRDSMDLINDLRAKQKEIDGLKSLIAESSEDKDMYDMANAELGEATEDEKRIQQLLLKSM 25
           LRDSM LINDLRAKQKEIDGLKSL++ESS+DKDM D+A  EL EA E+EKR+Q LLLKS+
Sbjct: 94  LRDSMLLINDLRAKQKEIDGLKSLVSESSDDKDMLDLAVGELDEAVEEEKRLQTLLLKSL 153

Query: 24  LLKDDADE 1
           L KD+ADE
Sbjct: 154 LPKDEADE 161


>ref|XP_003520768.1| PREDICTED: peptide chain release factor 1-like [Glycine max]
          Length = 415

 Score =  163 bits (413), Expect = 2e-38
 Identities = 80/125 (64%), Positives = 105/125 (84%)
 Frame = -2

Query: 375 IRSYSSGLDIQLSSDMIRIMEKRLTTIEYKSKYLENILNQPEASPTDYSQANKELRKLRD 196
           +RSYS+ +  QLS +++ IME+RL+ IEY++  L N LNQPEASP++Y++ANKELRKL  
Sbjct: 39  LRSYSAEVPAQLSPELLNIMEQRLSAIEYRTSCLNNFLNQPEASPSEYARANKELRKLSG 98

Query: 195 SMDLINDLRAKQKEIDGLKSLIAESSEDKDMYDMANAELGEATEDEKRIQQLLLKSMLLK 16
           S+DLI +LRAKQKEIDGLKSL+AE SEDKDM +MA  E+G+A E+E+++Q LLLKS+L K
Sbjct: 99  SVDLIKELRAKQKEIDGLKSLMAECSEDKDMLNMATEEMGQAVEEERKLQNLLLKSLLPK 158

Query: 15  DDADE 1
           DDADE
Sbjct: 159 DDADE 163


>ref|XP_002274067.1| PREDICTED: peptide chain release factor 1 [Vitis vinifera]
           gi|297744098|emb|CBI37068.3| unnamed protein product
           [Vitis vinifera]
          Length = 392

 Score =  162 bits (410), Expect = 4e-38
 Identities = 82/127 (64%), Positives = 106/127 (83%)
 Frame = -2

Query: 381 SLIRSYSSGLDIQLSSDMIRIMEKRLTTIEYKSKYLENILNQPEASPTDYSQANKELRKL 202
           S IR YS+ L  QLS+D+I IME+RL+ IE++S YL++ +N+PEASP +Y++ANKELRKL
Sbjct: 7   SFIRPYSTELQPQLSTDLIGIMEQRLSAIEHRSAYLQDFINRPEASPVEYARANKELRKL 66

Query: 201 RDSMDLINDLRAKQKEIDGLKSLIAESSEDKDMYDMANAELGEATEDEKRIQQLLLKSML 22
           R S++ I +LR KQKEIDGLKSL+AE SEDKDM +MA  ELG+A E+EKR+Q LLLKS+L
Sbjct: 67  RSSIEHITELRNKQKEIDGLKSLMAECSEDKDMLNMAAEELGQAAEEEKRLQNLLLKSLL 126

Query: 21  LKDDADE 1
            KD+ADE
Sbjct: 127 PKDEADE 133


>emb|CAN67129.1| hypothetical protein VITISV_040170 [Vitis vinifera]
          Length = 1542

 Score =  159 bits (403), Expect = 2e-37
 Identities = 81/127 (63%), Positives = 105/127 (82%)
 Frame = -2

Query: 381  SLIRSYSSGLDIQLSSDMIRIMEKRLTTIEYKSKYLENILNQPEASPTDYSQANKELRKL 202
            S IR YS+ L  QLS+D+I IME+RL+ IE++S YL++ +N+PEASP +Y++ANKELRKL
Sbjct: 1190 SFIRPYSTELQPQLSTDLIGIMEQRLSAIEHRSAYLQDFINRPEASPVEYARANKELRKL 1249

Query: 201  RDSMDLINDLRAKQKEIDGLKSLIAESSEDKDMYDMANAELGEATEDEKRIQQLLLKSML 22
            R S++ I +LR KQKEIDGLKSL+AE SEDKDM +MA  ELG+A  +EKR+Q LLLKS+L
Sbjct: 1250 RSSIEHITELRNKQKEIDGLKSLMAECSEDKDMLNMAAEELGQAAGEEKRLQNLLLKSLL 1309

Query: 21   LKDDADE 1
             KD+ADE
Sbjct: 1310 PKDEADE 1316


Top