BLASTX nr result

ID: Papaver23_contig00029232 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Papaver23_contig00029232
         (476 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_003610528.1| F-box family protein [Medicago truncatula] g...    71   1e-10
ref|XP_002308787.1| f-box family protein [Populus trichocarpa] g...    70   2e-10
ref|XP_002532719.1| ubiquitin-protein ligase, putative [Ricinus ...    69   4e-10
gb|AAF30317.1|AC018907_17 hypothetical protein [Arabidopsis thal...    69   5e-10
ref|NP_566277.2| F-box/kelch-repeat protein [Arabidopsis thalian...    69   5e-10

>ref|XP_003610528.1| F-box family protein [Medicago truncatula]
           gi|355511583|gb|AES92725.1| F-box family protein
           [Medicago truncatula]
          Length = 392

 Score = 70.9 bits (172), Expect = 1e-10
 Identities = 45/141 (31%), Positives = 70/141 (49%), Gaps = 15/141 (10%)
 Frame = -3

Query: 408 EMQRGRFAYYNPLEHRILGSCNGLVCYISSYQEDIIIWNPYTGDYKKIPTPPPI-ESTGD 232
           E+      Y N +  ++LGSCNGL+C I +  +DI  WNP    ++ IP+ P I + T +
Sbjct: 74  ELDHPLMCYSNRI--KVLGSCNGLLC-ICNIADDIAFWNPTIRKHRIIPSEPLIRKETNE 130

Query: 231 N-------GYYSYEFCYDLKTEDYKFARMANIPRTY-----SQIAVYSFKLDLWKTYPDI 88
           N         + Y F YD  T+DYK   ++     +     S + +Y+ + D+WKT P +
Sbjct: 131 NNTITTLLAAHVYGFGYDSATDDYKLVSISYFVDLHNRSFDSHVKIYTMRTDVWKTLPSM 190

Query: 87  PF--LHPHEDLVFFEGVLYWV 31
           P+         VF  G L+WV
Sbjct: 191 PYALCCARTMGVFVSGALHWV 211


>ref|XP_002308787.1| f-box family protein [Populus trichocarpa]
           gi|222854763|gb|EEE92310.1| f-box family protein
           [Populus trichocarpa]
          Length = 396

 Score = 69.7 bits (169), Expect = 2e-10
 Identities = 44/123 (35%), Positives = 67/123 (54%), Gaps = 12/123 (9%)
 Frame = -3

Query: 363 RILGSCNGLVCYISSYQEDIIIWNPYTGDYKKIPTPPPIE-----STGDNGYYSYEFCYD 199
           ++LGS NGL+C IS+  +DI +WNP T  ++ +P   PIE      T     Y + F YD
Sbjct: 97  KVLGSVNGLLC-ISNVVDDIAVWNPSTRKHRVVPF-LPIELKRYFGTKSCSVYVFGFGYD 154

Query: 198 LKTEDYKFARMANI----PRTY-SQIAVYSFKLDLWKTYPDIPFL--HPHEDLVFFEGVL 40
              +DYK  R+A       R++ S++ VYS +   W+   D+P+   +P  + VF  G L
Sbjct: 155 SVRDDYKLVRIAQFGGGGKRSFESEVKVYSLRKQSWRRIGDMPYCVHYPGANGVFANGAL 214

Query: 39  YWV 31
           +WV
Sbjct: 215 HWV 217


>ref|XP_002532719.1| ubiquitin-protein ligase, putative [Ricinus communis]
           gi|223527546|gb|EEF29668.1| ubiquitin-protein ligase,
           putative [Ricinus communis]
          Length = 389

 Score = 68.9 bits (167), Expect = 4e-10
 Identities = 44/136 (32%), Positives = 71/136 (52%), Gaps = 21/136 (15%)
 Frame = -3

Query: 375 PLEH---------RILGSCNGLVCYISSYQEDIIIWNPYTGDYKKIPTPPPIESTGDNGY 223
           PL+H         +ILGSCNGL+C I +  +DI +WNP    ++ +P   P+E     G 
Sbjct: 77  PLDHPLMCYNHGVKILGSCNGLLC-ICNIVDDIALWNPSIRAHRVVPY-LPVELKRYFGM 134

Query: 222 YS-----YEFCYDLKTEDYKFARMANI-----PRTYSQIAVYSFKLDLWKTYPDIPF--L 79
            S     + F YDL  +DYK  R+A           S++ V+S + + W+   D+P+  L
Sbjct: 135 CSCRVSVFGFGYDLSNDDYKLVRIAQFGGVDRKSFESEVKVFSLRKNSWRRIADMPYCVL 194

Query: 78  HPHEDLVFFEGVLYWV 31
           +P E+ ++  G L+W+
Sbjct: 195 YPGENGIYANGALHWL 210


>gb|AAF30317.1|AC018907_17 hypothetical protein [Arabidopsis thaliana]
           gi|21536665|gb|AAM60997.1| unknown [Arabidopsis
           thaliana]
          Length = 416

 Score = 68.6 bits (166), Expect = 5e-10
 Identities = 40/116 (34%), Positives = 62/116 (53%), Gaps = 6/116 (5%)
 Frame = -3

Query: 360 ILGSCNGLVCYISSYQEDIIIWNPYTGDYKKIPT---PPPIESTGDNGYYSYEFCYDLKT 190
           I+GS NGLVC IS  +  + ++NP TGD K++P    P  +E   DN + +Y F +D  T
Sbjct: 154 IVGSSNGLVC-ISPGEGAVFLYNPTTGDSKRLPENFRPKSVEYERDN-FQTYGFGFDGLT 211

Query: 189 EDYKFARMANIPRTYSQIAVYSFKLDLWKTYPDIPFLH---PHEDLVFFEGVLYWV 31
           +DYK  ++          +VYS K D W+   ++ + H    +   V F G ++WV
Sbjct: 212 DDYKLVKLVATSEDILDASVYSLKADSWRRICNLNYEHNDGSYTSGVHFNGAIHWV 267


>ref|NP_566277.2| F-box/kelch-repeat protein [Arabidopsis thaliana]
           gi|75151183|sp|Q8GXC7.1|FBK50_ARATH RecName:
           Full=F-box/kelch-repeat protein At3g06240
           gi|26451648|dbj|BAC42921.1| unknown protein [Arabidopsis
           thaliana] gi|29824145|gb|AAP04033.1| putative F-box
           protein family [Arabidopsis thaliana]
           gi|332640843|gb|AEE74364.1| F-box/kelch-repeat protein
           [Arabidopsis thaliana]
          Length = 427

 Score = 68.6 bits (166), Expect = 5e-10
 Identities = 40/116 (34%), Positives = 62/116 (53%), Gaps = 6/116 (5%)
 Frame = -3

Query: 360 ILGSCNGLVCYISSYQEDIIIWNPYTGDYKKIPT---PPPIESTGDNGYYSYEFCYDLKT 190
           I+GS NGLVC IS  +  + ++NP TGD K++P    P  +E   DN + +Y F +D  T
Sbjct: 165 IVGSSNGLVC-ISPGEGAVFLYNPTTGDSKRLPENFRPKSVEYERDN-FQTYGFGFDGLT 222

Query: 189 EDYKFARMANIPRTYSQIAVYSFKLDLWKTYPDIPFLH---PHEDLVFFEGVLYWV 31
           +DYK  ++          +VYS K D W+   ++ + H    +   V F G ++WV
Sbjct: 223 DDYKLVKLVATSEDILDASVYSLKADSWRRICNLNYEHNDGSYTSGVHFNGAIHWV 278


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