BLASTX nr result

ID: Papaver23_contig00029216 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Papaver23_contig00029216
         (1080 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

dbj|BAE79382.1| unnamed protein product [Ipomoea batatas]              87   7e-15
gb|EEE55133.1| hypothetical protein OsJ_02920 [Oryza sativa Japo...    84   6e-14
gb|EEC71228.1| hypothetical protein OsI_03168 [Oryza sativa Indi...    79   1e-12
emb|CCA65997.1| hypothetical protein [Beta vulgaris subsp. vulga...    77   7e-12
ref|NP_187562.1| RNase H domain-containing protein [Arabidopsis ...    72   3e-10

>dbj|BAE79382.1| unnamed protein product [Ipomoea batatas]
          Length = 1366

 Score = 87.0 bits (214), Expect = 7e-15
 Identities = 81/335 (24%), Positives = 139/335 (41%), Gaps = 9/335 (2%)
 Frame = -1

Query: 1023 WKFKVPYKFQIFMWKTLHNAIPVKVRIFNHDNSDNQLFVLCNTQHPEDVDHLFLHCPFAQ 844
            W+     K ++FMWK + N + V V       +D     +C  +  E +DHLF  C  A+
Sbjct: 1041 WRATCTEKIKLFMWKIVKNGLMVNVERKRRGLADAASCPVCG-EEDETLDHLFRRCLLAE 1099

Query: 843  AIWRYFLPQHYTSIVQHSTVLTWIQ---TWQSKDSYINIFNTADRIHVTLCIIHHI*KLG 673
            A W   +P        H  + +W++   + Q KD Y   ++      +   I+ ++ K  
Sbjct: 1100 ACWDSAVPPLTFQTSNHLHMHSWMKAACSSQQKDGYSTNWSL-----IFPYILWNLWKAR 1154

Query: 672  CRVIFSS--TNPNTVIHHVNSYIAFHHLGNPSVNTMSINRSILMLNLP----WKPPPPGY 511
             R++F +  T P+ +++          + +     +   R+ L         W PP  G+
Sbjct: 1155 NRLVFDNNITAPSDILNR-------SFMESSEARCLLAKRTGLQTAFQTWVVWSPPAAGF 1207

Query: 510  LKINIDASFNKVSLLADIGIITSYHAGFYMMGK*CLKRAQNVNQAESWAMFEAMQLATSY 331
             K+N D +    S LA  G +     G ++ G  C     N   AE W + E + LA + 
Sbjct: 1208 TKLNSDGACKSHSHLASAGGLLRNENGLWVAGYTCNIGTANSFLAELWGLREGLLLAKNR 1267

Query: 330  GWSRVIFETDNLNISSYLQKHSPLPPWQSMPLLTQCEKKCNINSSWSCVFVYRSCNKTAN 151
            G++++I ETD+  +   L+K  P+ P  S+ L+  C+   +         + R  N+ A+
Sbjct: 1268 GFTKLIAETDSEAVVQVLRKDGPVTPDASI-LVKDCKLLLDHFQEIKVTHILREGNQCAD 1326

Query: 150  ALAKAARRFHLCWEWLTYPPHLLIPHLTCDVNSLA 46
             LA   +        L  PP  L   L  D   LA
Sbjct: 1327 FLANLGQSSSWGTTILERPPDDLRIFLQRDAIGLA 1361


>gb|EEE55133.1| hypothetical protein OsJ_02920 [Oryza sativa Japonica Group]
          Length = 1049

 Score = 84.0 bits (206), Expect = 6e-14
 Identities = 66/270 (24%), Positives = 119/270 (44%), Gaps = 10/270 (3%)
 Frame = -1

Query: 1053 NLSPQFWLRFWKFKVPYKFQIFMWKTLHNAIPVKVRIFNHDNSDNQLFVLCNTQHPEDVD 874
            N+  QFW   W    P K  I +W+++H+ +P   ++        +  + C   H + ++
Sbjct: 765  NVDSQFWKALWTINAPGKMLIHLWRSVHDCLPTGFQLRRRHVPATEGCIFCG--HDDRIE 822

Query: 873  HLFLHCPFAQAIWRYFLPQHYTSIVQHS--TVLTWIQTWQSKDSYINIFNTADRIHVTLC 700
            H+FL CPFA  +W     +   ++ +     +  W+  + ++ S+I       +  V   
Sbjct: 823  HVFLVCPFAATVWDAIKEKFQINLCRRELCNIRQWVFDFLTRSSHI-------QKTVLAV 875

Query: 699  IIHHI*KLG--CRVIFSSTNPNTVIHHVNSYIAFHHLGNPSVNTMSINRSILMLNLP--- 535
             + HI +     R    +T+P  VIH + SY+       P       N S   L LP   
Sbjct: 876  TLRHIWEARNFSRNNPVTTHPRQVIHKIVSYVDMIVQHCPK----DRNASGCDLPLPVTK 931

Query: 534  WKPPPPGYLKINIDASFNKVSLLADIGIITSYHAGFYMMGK*CLKRAQNV---NQAESWA 364
            WKPPPPG + IN DA+  + S    +  +   H+   ++     KR   +     AE+ A
Sbjct: 932  WKPPPPGMVLINSDAALFQASNQTGLAFVIRDHSATCLLA--ANKRITGLLSPELAEALA 989

Query: 363  MFEAMQLATSYGWSRVIFETDNLNISSYLQ 274
            +  A++ A + G+  V+  +D L++   +Q
Sbjct: 990  IRFALEHAKAEGFQNVLMASDCLSVIKRIQ 1019


>gb|EEC71228.1| hypothetical protein OsI_03168 [Oryza sativa Indica Group]
          Length = 995

 Score = 79.3 bits (194), Expect = 1e-12
 Identities = 65/270 (24%), Positives = 116/270 (42%), Gaps = 10/270 (3%)
 Frame = -1

Query: 1053 NLSPQFWLRFWKFKVPYKFQIFMWKTLHNAIPVKVRIFNHDNSDNQLFVLCNTQHPEDVD 874
            N+  QFW   W    P K  I +W+++H+ +P   ++        +  + C   H + ++
Sbjct: 711  NVDSQFWKALWTINAPGKMLIHLWRSVHDCLPTGFQLRRRHVPATEGCIFCG--HDDRIE 768

Query: 873  HLFLHCPFAQAIWRYFLPQHYTSIVQHS--TVLTWIQTWQSKDSYINIFNTADRIHVTLC 700
            H+FL CPFA  +W     +   ++ +     +  W+  + ++ S+I       +  V   
Sbjct: 769  HVFLVCPFAATVWDAIKEKFQINLCRRELCNMRQWVFDFLTRSSHI-------QKTVLAV 821

Query: 699  IIHHI*KLG--CRVIFSSTNPNTVIHHVNSYIAFHHLGNPSVNTMSINRSILMLNLP--- 535
             + HI +     R     T+P  VIH + SY+       P       N S   L LP   
Sbjct: 822  TLRHIWEARNFSRNNPVITHPRQVIHKIVSYVDMIVQHCPK----DRNASGCDLPLPVTK 877

Query: 534  WKPPPPGYLKINIDASFNKVSLLADIGIITSYHAGFYMMGK*CLKRAQNV---NQAESWA 364
            W PPPPG + IN DA+  + S    +  +   H+   M+     KR   +     AE+  
Sbjct: 878  WTPPPPGMVLINSDAALFQASNQTGLAFVIRDHSATCMLA--ANKRITGLLSPELAEALV 935

Query: 363  MFEAMQLATSYGWSRVIFETDNLNISSYLQ 274
            +  A++ A + G+  V+  +D L++   +Q
Sbjct: 936  IRFALEHAKAEGFQNVLMASDCLSVIKRIQ 965


>emb|CCA65997.1| hypothetical protein [Beta vulgaris subsp. vulgaris]
          Length = 1363

 Score = 77.0 bits (188), Expect = 7e-12
 Identities = 81/312 (25%), Positives = 133/312 (42%), Gaps = 11/312 (3%)
 Frame = -1

Query: 1035 WLRFWKFKVPYKFQIFMWKTLHNAIPVKVRIFNHDNSDNQLFVLCNTQHP-EDVDHLFLH 859
            W   W+  +P+K+++ +W  +HN +P  + +    ++ N   V C+  HP ED+ HLF  
Sbjct: 1038 WRGLWRKNIPFKYKLLIWNGIHNILPTALFLAKRIHNFNPQCVACD--HPIEDMIHLFRD 1095

Query: 858  CPFAQAIWRYFLPQHYTSIVQHSTVLTWIQTW-----QSKDSYINIFNTADRIHVTLCII 694
            C  A ++W   L  H  +       L W + W        D ++  F TA          
Sbjct: 1096 CCVASSVWIEILKHHKPNNQNLFFNLEW-EEWIDFNLNQHDYWVTKFTTA---------F 1145

Query: 693  HHI*KLGCRVIF--SSTNPNTVIHHVNSYIAFHHLGNPSVNTMSINRSILMLNLPWKPPP 520
             HI     + +F  +  +P    + V +   F ++    VN    N S ++L   WKPP 
Sbjct: 1146 WHIWCSRNKTVFECAVNHPKFTYNRVVADF-FTNIRAFQVNNTQGNGSKVVLR--WKPPH 1202

Query: 519  PGYLKINIDASFNKVSLLADIGIITSYHAGFYMMGK*CLKRAQNVNQAESWAMFEAMQLA 340
             G+LK+N D ++      A IG +     G + +G      A +   AE  A+ E +Q+A
Sbjct: 1203 QGFLKLNTDGAWKADWENAGIGGVFRDAVGNWELGFAKRVDAGSPEAAELMAIREGLQVA 1262

Query: 339  TSYGWSRVIFETDNLNISSYLQKHSPLPPWQSMPLLTQCEKKC-NINSSWSCVFVY--RS 169
                + ++  E D   +   L K  PL   ++ PL       C  +   WS  F++  R 
Sbjct: 1263 WDCNYHKLEVECDAKGVVQLLAK--PLEA-ENHPLGVIVMDICILLTRHWSVEFLHIKRE 1319

Query: 168  CNKTANALAKAA 133
             NK A+ LA  A
Sbjct: 1320 GNKVAHCLAAEA 1331


>ref|NP_187562.1| RNase H domain-containing protein [Arabidopsis thaliana]
            gi|6682231|gb|AAF23283.1|AC016661_8 putative non-LTR
            reverse transcriptase [Arabidopsis thaliana]
            gi|332641254|gb|AEE74775.1| RNase H domain-containing
            protein [Arabidopsis thaliana]
          Length = 484

 Score = 71.6 bits (174), Expect = 3e-10
 Identities = 80/325 (24%), Positives = 130/325 (40%), Gaps = 14/325 (4%)
 Frame = -1

Query: 1071 PPNATLNLSPQFWLRFWKFKVPYKFQIFMWKTLHNAIPVKVRIFNHDNSDNQLFVLCNTQ 892
            PP+ +++L      R W   +  K + F+W+ L  A+    R+       +     C+ +
Sbjct: 151  PPHGSIDLKT----RIWNLPIMPKLKHFLWRALSQALATTERLTTRGMRIDPSCPRCHRE 206

Query: 891  HPEDVDHLFLHCPFAQAIWRYFLPQHYTSIVQHSTVLTWIQTWQSKDSYINIFN-----T 727
            + E ++H    CPFA   WR         +   S +   + +   +++  NI N     T
Sbjct: 207  N-ESINHALFTCPFATMAWR---------LSDSSLIRNQLMSNDFEENISNILNFVQDTT 256

Query: 726  ADRIHVTLCI--IHHI*KLGCRVIFSSTNPNTVIHHVNSYIAFHHLGNPSVN---TMSIN 562
                H  L +  I  I K    V+F+    +     +++    H   N + +   T S  
Sbjct: 257  MSDFHKLLPVWLIWRIWKARNNVVFNKFRESPSKTVLSAKAETHDWLNATQSHKKTPSPT 316

Query: 561  RSILMLNLPWKPPPPGYLKINIDASFNKVSLLADIGIITSYHAGF-YMMGK*CLKRAQNV 385
            R I    + W+ PP  Y+K N DA F+   L A  G I   H G     G   L    N 
Sbjct: 317  RQIAENKIEWRNPPATYVKCNFDAGFDVQKLEATGGWIIRNHYGTPISWGSMKLAHTSNP 376

Query: 384  NQAESWAMFEAMQLATSYGWSRVIFETD---NLNISSYLQKHSPLPPWQSMPLLTQCEKK 214
             +AE+ A+  A+Q     G+++V  E D    +N+ + +  HS L        L      
Sbjct: 377  LEAETKALLAALQQTWIRGYTQVFMEGDCQTLINLINGISFHSSLANH-----LEDISFW 431

Query: 213  CNINSSWSCVFVYRSCNKTANALAK 139
             N  +S    F+ R  NK A+ LAK
Sbjct: 432  ANKFASIQFGFIRRKGNKLAHVLAK 456


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