BLASTX nr result

ID: Papaver23_contig00029200 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Papaver23_contig00029200
         (490 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

gb|AAB82639.1| putative non-LTR retroelement reverse transcripta...    66   3e-09
ref|XP_002467234.1| hypothetical protein SORBIDRAFT_01g021750 [S...    65   8e-09
gb|AAS55787.1| hypothetical protein [Oryza sativa Japonica Group...    64   1e-08
ref|XP_002464795.1| hypothetical protein SORBIDRAFT_01g026845 [S...    64   2e-08
gb|AAX95129.1| retrotransposon protein, putative, unclassified [...    62   4e-08

>gb|AAB82639.1| putative non-LTR retroelement reverse transcriptase [Arabidopsis
           thaliana]
          Length = 1374

 Score = 66.2 bits (160), Expect = 3e-09
 Identities = 31/108 (28%), Positives = 56/108 (51%)
 Frame = +3

Query: 141 VLAWNCQGLGKIEARNSLLDTLNKTNPDILFISETKQQHNAMHAIMRQLDVYNYWLVPPR 320
           +L+WNCQG+G       L +      P+++F+ ETK++ N +  ++  L  ++   V P 
Sbjct: 3   ILSWNCQGVGNTPTVRHLREIRGLYFPEVIFLCETKKRRNYLENVVGHLGFFDLHTVEPI 62

Query: 321 GSAGGLCLIWKNNLKLEIKDHAXXXXXXXXXXXXXXXEWLLTCFYGSP 464
           G +GGL L+WK+++++++                   E+ LTC YG P
Sbjct: 63  GKSGGLALMWKDSVQIKVLQ--SDKRLIDALLIWQDKEFYLTCIYGEP 108


>ref|XP_002467234.1| hypothetical protein SORBIDRAFT_01g021750 [Sorghum bicolor]
           gi|241921088|gb|EER94232.1| hypothetical protein
           SORBIDRAFT_01g021750 [Sorghum bicolor]
          Length = 426

 Score = 64.7 bits (156), Expect = 8e-09
 Identities = 32/114 (28%), Positives = 57/114 (50%), Gaps = 3/114 (2%)
 Frame = +3

Query: 135 ISVLAWNCQGLG---KIEARNSLLDTLNKTNPDILFISETKQQHNAMHAIMRQLDVYNYW 305
           +++L+WNC+G G   +    N L   L  T   + FISET+    +  +++ + +  + +
Sbjct: 1   MTLLSWNCRGSGGSLRSSKMNHLARLLTSTKSQVCFISETRNSTISRTSLINRFNALDAF 60

Query: 306 LVPPRGSAGGLCLIWKNNLKLEIKDHAXXXXXXXXXXXXXXXEWLLTCFYGSPY 467
           ++P +G +GGL LIWK +  L I D +               ++ L C YG P+
Sbjct: 61  IIPAQGQSGGLWLIWKQDFSLTIVDQSPNYIFALCNNNLDNRQFGLICLYGDPH 114


>gb|AAS55787.1| hypothetical protein [Oryza sativa Japonica Group]
           gi|54291856|gb|AAV32224.1| hypothetical protein [Oryza
           sativa Japonica Group]
          Length = 1936

 Score = 63.9 bits (154), Expect = 1e-08
 Identities = 32/110 (29%), Positives = 50/110 (45%)
 Frame = +3

Query: 135 ISVLAWNCQGLGKIEARNSLLDTLNKTNPDILFISETKQQHNAMHAIMRQLDVYNYWLVP 314
           +S LAWNC+GLG       L   + K    ++F+ ET+Q    M  + R+L    +  V 
Sbjct: 636 MSCLAWNCRGLGNTATVQDLRALIQKAGSQLVFLCETRQSVEKMSRLRRKLAFRGFVGVS 695

Query: 315 PRGSAGGLCLIWKNNLKLEIKDHAXXXXXXXXXXXXXXXEWLLTCFYGSP 464
             G +GGL L W  ++ +++KD                 +W +T  YG P
Sbjct: 696 SEGKSGGLALYWDESVSVDVKDINKRYIDAYVRLSPDEPQWHITFVYGEP 745


>ref|XP_002464795.1| hypothetical protein SORBIDRAFT_01g026845 [Sorghum bicolor]
           gi|241918649|gb|EER91793.1| hypothetical protein
           SORBIDRAFT_01g026845 [Sorghum bicolor]
          Length = 295

 Score = 63.5 bits (153), Expect = 2e-08
 Identities = 33/111 (29%), Positives = 52/111 (46%)
 Frame = +3

Query: 135 ISVLAWNCQGLGKIEARNSLLDTLNKTNPDILFISETKQQHNAMHAIMRQLDVYNYWLVP 314
           + +LAWNC+GL    A  +LL+   + NPD+LF+SET      +  + R++    + +  
Sbjct: 1   MKILAWNCRGLASHRAVRALLEVQRRENPDVLFLSETHLSKAKVENLKRKVGCEKFAIHE 60

Query: 315 PRGSAGGLCLIWKNNLKLEIKDHAXXXXXXXXXXXXXXXEWLLTCFYGSPY 467
             G +GGL ++WK  +   +                   EW LT  YG PY
Sbjct: 61  SDGRSGGLLMLWKKEV---VVRPVNISQYYIDVVMEEEEEWRLTGIYGDPY 108


>gb|AAX95129.1| retrotransposon protein, putative, unclassified [Oryza sativa
           Japonica Group] gi|62733115|gb|AAX95232.1|
           retrotransposon protein, putative, unclassified [Oryza
           sativa Japonica Group]
          Length = 1324

 Score = 62.4 bits (150), Expect = 4e-08
 Identities = 34/115 (29%), Positives = 53/115 (46%)
 Frame = +3

Query: 135 ISVLAWNCQGLGKIEARNSLLDTLNKTNPDILFISETKQQHNAMHAIMRQLDVYNYWLVP 314
           + ++AWNC+GLG       LL+   + +PDILF+S TK   N +     +L + N  +  
Sbjct: 448 MKIIAWNCRGLGNGPTVRGLLNLQKEDDPDILFLSNTKMDTNKLQCFRWKLGMPNLVVKD 507

Query: 315 PRGSAGGLCLIWKNNLKLEIKDHAXXXXXXXXXXXXXXXEWLLTCFYGSPYSPLK 479
            +G +GGL + WK  + L ++  +                W  T  YG P S  K
Sbjct: 508 CQGKSGGLAVFWKKEINLRLRTVSRLFMDVDVMEDDGFW-WRFTGVYGEPRSDKK 561


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