BLASTX nr result

ID: Papaver23_contig00029158 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Papaver23_contig00029158
         (843 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

emb|CAN83506.1| hypothetical protein VITISV_027576 [Vitis vinifera]   186   7e-45
emb|CAN77680.1| hypothetical protein VITISV_040762 [Vitis vinifera]   176   8e-42
gb|ABG00000.1| retrotransposon protein, putative, Ty1-copia subc...   172   1e-40
gb|ABA98049.1| retrotransposon protein, putative, Ty1-copia subc...   168   1e-39
gb|AAU43956.1| unknown protein [Oryza sativa Japonica Group] gi|...   167   2e-39

>emb|CAN83506.1| hypothetical protein VITISV_027576 [Vitis vinifera]
          Length = 1172

 Score =  186 bits (471), Expect = 7e-45
 Identities = 95/227 (41%), Positives = 138/227 (60%), Gaps = 4/227 (1%)
 Frame = +1

Query: 172 WVPDSGATHHITSEMSNLNLHSEYQGFDQVKVGNGSGLTITHVGSSTLHNDSVRFTILNV 351
           W+ DSGA+HHITS++SNL++H+ Y G D + + +G+GL ITH GS +LH  + +F++ NV
Sbjct: 233 WLLDSGASHHITSDLSNLSIHAPYNGSDDIMIDDGTGLPITHTGSLSLHTSNAQFSLTNV 292

Query: 352 LHVSSITKNLIRVLQFIKENNCYFEFYSDKFLIKDLVTHKVLLTGPVKDGLYHMEFTKEQ 531
           L V  + KNLI + +    NN    F    FL+KDL T   LL G  KDG+Y    +   
Sbjct: 293 LCVPGMKKNLISISKLXISNNVSITFLPSSFLVKDLRTGATLLKGKTKDGVYEWLVSSPL 352

Query: 532 LKQAFXXXXXXXXXWHNKLGHPSYKTLKHVLSSVNEVIDS----HFTSTLCSYFQTAKSH 699
           L  AF         WH++LGHP++  LKHV+S+ N  + S    HF+   C      KSH
Sbjct: 353 L--AFSSVKTSSSEWHHRLGHPAFPILKHVISTNNLALSSSSLLHFSCNTC---HCNKSH 407

Query: 700 ALPYPHSSPNNMYGPLDLVYSDVWVSPLCSVNGYKYYVSFIDSFSRF 840
            L + +S+ N+   PL ++YSDVW SP+ S +G+KYYV F+D F+++
Sbjct: 408 KLSFSNSTINSS-RPLQILYSDVWTSPIISYDGFKYYVIFVDYFTKY 453


>emb|CAN77680.1| hypothetical protein VITISV_040762 [Vitis vinifera]
          Length = 590

 Score =  176 bits (445), Expect = 8e-42
 Identities = 95/225 (42%), Positives = 135/225 (60%), Gaps = 2/225 (0%)
 Frame = +1

Query: 172 WVPDSGATHHITSEMSNLNLHSEYQGFDQVKVGNGSGLTITHVGSSTLHNDSVRFTILNV 351
           W+ DS A+H+ITS++SNL  HSEY G D+V +G+GSGL ITH GS TL   + +F + + 
Sbjct: 297 WLIDSAASHNITSQVSNLQFHSEYDGTDEVIIGDGSGLPITHSGSLTLSFPNRKFQVEDT 356

Query: 352 LHVSSITKNLIRVLQFIKENNCYFEFYSDKFLIKDLVTHKVLLTGPVKDGLYHMEFTKEQ 531
           L V +I KNLI V  F K+NN   EF+   FL+KD  T ++LL GP ++G+Y M  +   
Sbjct: 357 LCVPTINKNLISVHHFTKQNNVILEFHPTYFLVKDRRTGEILLQGPCENGVYPMPSSPAA 416

Query: 532 LKQAFXXXXXXXXXWHNKLGHPSYKTLKHVLSSVNEVIDSHFT-STLCSYFQTAKSHALP 708
              AF         WH +LGHPS+K +  ++SS +    S  + S  C      K+H LP
Sbjct: 417 TPIAFVHERTSVTGWHQRLGHPSFKVVTRLISSFSLPTTSCLSGSNNCHSCSINKAHQLP 476

Query: 709 YPHSSPNNMYGPLDLVYSDVW-VSPLCSVNGYKYYVSFIDSFSRF 840
           + H        P DL+Y+DVW  SP  S+NG++YYV F+D F+++
Sbjct: 477 F-HKHGLTSTTPFDLLYTDVWGPSPTPSLNGHRYYVIFVDHFTKY 520


>gb|ABG00000.1| retrotransposon protein, putative, Ty1-copia subclass [Oryza sativa
            Japonica Group]
          Length = 2074

 Score =  172 bits (435), Expect = 1e-40
 Identities = 102/259 (39%), Positives = 136/259 (52%), Gaps = 5/259 (1%)
 Frame = +1

Query: 82   GDVYDDYWYPEPEVFVVYQXXXXXXXXXXX--WVPDSGATHHITSEMSNLNLHSEYQGFD 255
            G V  D WY   E F+                W  D+GAT HIT E+  L  H +Y G +
Sbjct: 1249 GHVVADCWYRYDENFIPDSKTAAAASYGVDTNWYMDTGATDHITGELDKLTTHEKYNGKE 1308

Query: 256  QVKVGNGSGLTITHVGSSTLHNDSVRFTILNVLHVSSITKNLIRVLQFIKENNCYFEFYS 435
            Q+   +G+G+ I HVG S +H       + N+LHV    KNLI   +   +N+ + E + 
Sbjct: 1309 QIHTASGAGMDIKHVGHSIIHTPICNIQLKNILHVPKAEKNLISAHRLAVDNHAFVEVHP 1368

Query: 436  DKFLIKDLVTHKVLLTGPVKDGLYHMEFTK-EQLKQAFXXXXXXXXXWHNKLGHPSYKTL 612
              F IKD VT  +LL GP ++GLY +  +     KQ           WH++LGHPS   +
Sbjct: 1369 RFFAIKDQVTKNLLLRGPCRNGLYPLPTSSLATSKQVLGAIKPTMSRWHSRLGHPSLAIV 1428

Query: 613  KHVLSSVN-EVIDSHFTSTLCSYFQTAKSHALPYPHS-SPNNMYGPLDLVYSDVWVSPLC 786
            + V+SS N   +     S +C+  Q AKSH LPYP S S +N   PL+LV+SDVW     
Sbjct: 1429 QKVVSSNNLPCLGDVNESGVCNACQQAKSHQLPYPKSFSVSN--NPLELVFSDVWGPAPT 1486

Query: 787  SVNGYKYYVSFIDSFSRFT 843
            SV G KYYVSFID FS+FT
Sbjct: 1487 SVGGRKYYVSFIDDFSKFT 1505


>gb|ABA98049.1| retrotransposon protein, putative, Ty1-copia subclass [Oryza sativa
            Japonica Group]
          Length = 1460

 Score =  168 bits (426), Expect = 1e-39
 Identities = 95/260 (36%), Positives = 141/260 (54%), Gaps = 6/260 (2%)
 Frame = +1

Query: 82   GDVYDDYWYPEPEVFV-----VYQXXXXXXXXXXXWVPDSGATHHITSEMSNLNLHSEYQ 246
            G    D WY   E +V     V             W  D+GAT H+T E+  L +  +Y 
Sbjct: 285  GHTAADCWYRYDEDYVPDAKHVAAAAVNSYGVDTNWYIDTGATDHVTGELDKLTMKEKYN 344

Query: 247  GFDQVKVGNGSGLTITHVGSSTLHNDSVR-FTILNVLHVSSITKNLIRVLQFIKENNCYF 423
            G +Q+   +G+G+ I+H+G + +HN + R   + NVL+V    KNL+ V + + +N+ + 
Sbjct: 345  GGEQIHTASGAGMDISHIGHAIVHNPNSRNIHLRNVLYVPQAKKNLVSVHRLVNDNSAFL 404

Query: 424  EFYSDKFLIKDLVTHKVLLTGPVKDGLYHMEFTKEQLKQAFXXXXXXXXXWHNKLGHPSY 603
            E + D F +KD +T K LL G     LY +  +   LKQA+         WH++LGHPS 
Sbjct: 405  ELHRDYFFLKDQITRKTLLKGRSWRRLYPLPHS--SLKQAYSAIKLSLDRWHHRLGHPSI 462

Query: 604  KTLKHVLSSVNEVIDSHFTSTLCSYFQTAKSHALPYPHSSPNNMYGPLDLVYSDVWVSPL 783
             T+K V++  +       + ++C+  Q AKSH LP+P SS  + + PL+LV+SDVW    
Sbjct: 463  TTVKQVVNKFSLPCSDLSSESVCNACQQAKSHQLPFPISSSVSKH-PLELVFSDVWGPAP 521

Query: 784  CSVNGYKYYVSFIDSFSRFT 843
             SV   KYYVSFID FS+FT
Sbjct: 522  ESVGRKKYYVSFIDDFSKFT 541


>gb|AAU43956.1| unknown protein [Oryza sativa Japonica Group]
            gi|52353503|gb|AAU44069.1| putative polyprotein [Oryza
            sativa Japonica Group]
          Length = 1447

 Score =  167 bits (424), Expect = 2e-39
 Identities = 92/256 (35%), Positives = 135/256 (52%), Gaps = 9/256 (3%)
 Frame = +1

Query: 103  WYPEPEVFVV---YQXXXXXXXXXXXWVPDSGATHHITSEMSNLNLHSEYQGFDQVKVGN 273
            WY   E FV    Y            W  D+ AT H+T E+  L +   Y+G DQV   +
Sbjct: 293  WYRYDEDFVPDEKYAGSATSYGIDTNWYVDTSATDHVTGELDKLTVRDRYKGQDQVHTAS 352

Query: 274  GSGLTITHVGSSTLHNDSVRFTILNVLHVSSITKNLIRVLQFIKENNCYFEFYSDKFLIK 453
            G+G+ I+H+G ST+   +    + N+L+V +  KNL+   + + +N+ Y E YS  F +K
Sbjct: 353  GAGMEISHIGHSTVRTPNRDIHLRNILYVPNANKNLVSANRLVSDNSAYMELYSKYFNLK 412

Query: 454  DLVTHKVLLTGPVKDGLYHMEFTK-----EQLKQAFXXXXXXXXXWHNKLGHPSYKTLKH 618
            DL T K+L  GP +  LY +  +        LK+AF         WH++LGHP+   ++ 
Sbjct: 413  DLATKKLLFRGPCRGRLYALPSSSPHERPRPLKEAFGAIKPSFERWHSRLGHPASPIVEK 472

Query: 619  VLSSVN-EVIDSHFTSTLCSYFQTAKSHALPYPHSSPNNMYGPLDLVYSDVWVSPLCSVN 795
            V+S  N   +      ++C   Q  KSH LPY  SS  + + PL+L+YSDVW   L SV 
Sbjct: 473  VISKNNLPCLAESNKQSVCDACQQGKSHQLPYSRSSSMSSH-PLELIYSDVWGPALTSVG 531

Query: 796  GYKYYVSFIDSFSRFT 843
            G +YYVSFI  +S+FT
Sbjct: 532  GKQYYVSFIGDYSKFT 547


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