BLASTX nr result

ID: Papaver23_contig00029107 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Papaver23_contig00029107
         (511 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_004156647.1| PREDICTED: LOW QUALITY PROTEIN: E3 ubiquitin...    63   3e-08
ref|XP_004137939.1| PREDICTED: LOW QUALITY PROTEIN: E3 ubiquitin...    63   3e-08
ref|XP_002270537.2| PREDICTED: E3 ubiquitin-protein ligase UBR2-...    62   4e-08
emb|CBI30552.3| unnamed protein product [Vitis vinifera]               62   4e-08
ref|XP_002532325.1| ubiquitin ligase E3 alpha, putative [Ricinus...    57   2e-06

>ref|XP_004156647.1| PREDICTED: LOW QUALITY PROTEIN: E3 ubiquitin-protein ligase
           UBR1-like [Cucumis sativus]
          Length = 2089

 Score = 62.8 bits (151), Expect = 3e-08
 Identities = 39/101 (38%), Positives = 60/101 (59%)
 Frame = +3

Query: 207 EIDSSYPSTGLAGLDPRDRILLKLSKIGVPEDRIEQGERGLVAYLKENKSKLHDVVLYGV 386
           E+D   PS   A L PRDRIL +L+ +GVP++ ++Q  RGLV ++K+NK  + ++V   +
Sbjct: 3   EMDIGSPSES-APLKPRDRILRRLAVLGVPDELLDQLFRGLVTFVKDNKFLIPELV-SAI 60

Query: 387 LPSDEEVIETIAVSKIENGEGGVIMKKGPKLKELFKECVHW 509
           LP+D EV+E I     +   G      GP +K  F+E + W
Sbjct: 61  LPTDVEVVEVIR----DAIPGAKKSLAGPTMKANFRESMMW 97


>ref|XP_004137939.1| PREDICTED: LOW QUALITY PROTEIN: E3 ubiquitin-protein ligase
           UBR1-like [Cucumis sativus]
          Length = 2099

 Score = 62.8 bits (151), Expect = 3e-08
 Identities = 39/101 (38%), Positives = 60/101 (59%)
 Frame = +3

Query: 207 EIDSSYPSTGLAGLDPRDRILLKLSKIGVPEDRIEQGERGLVAYLKENKSKLHDVVLYGV 386
           E+D   PS   A L PRDRIL +L+ +GVP++ ++Q  RGLV ++K+NK  + ++V   +
Sbjct: 3   EMDIGSPSES-APLKPRDRILRRLAVLGVPDELLDQLFRGLVTFVKDNKFLIPELV-SAI 60

Query: 387 LPSDEEVIETIAVSKIENGEGGVIMKKGPKLKELFKECVHW 509
           LP+D EV+E I     +   G      GP +K  F+E + W
Sbjct: 61  LPTDVEVVEVIR----DAIPGAKKSLAGPTMKANFRESMMW 97


>ref|XP_002270537.2| PREDICTED: E3 ubiquitin-protein ligase UBR2-like [Vitis vinifera]
          Length = 2048

 Score = 62.4 bits (150), Expect = 4e-08
 Identities = 41/98 (41%), Positives = 59/98 (60%)
 Frame = +3

Query: 204 MEIDSSYPSTGLAGLDPRDRILLKLSKIGVPEDRIEQGERGLVAYLKENKSKLHDVVLYG 383
           M+IDS   S  L    PR RI+ +LS  GVPE+ +E+ E GLVAY+KENK ++ ++V   
Sbjct: 1   MDIDSPAESNSLP---PRYRIVQRLSLQGVPEEHLERLEPGLVAYVKENKFRVPELV-SA 56

Query: 384 VLPSDEEVIETIAVSKIENGEGGVIMKKGPKLKELFKE 497
           +LP++EEV+E     K  + E  V     P + E F+E
Sbjct: 57  ILPTEEEVLEAYKECKASSKEDLV----SPTMTEQFRE 90


>emb|CBI30552.3| unnamed protein product [Vitis vinifera]
          Length = 400

 Score = 62.4 bits (150), Expect = 4e-08
 Identities = 41/98 (41%), Positives = 59/98 (60%)
 Frame = +3

Query: 204 MEIDSSYPSTGLAGLDPRDRILLKLSKIGVPEDRIEQGERGLVAYLKENKSKLHDVVLYG 383
           M+IDS   S  L    PR RI+ +LS  GVPE+ +E+ E GLVAY+KENK ++ ++V   
Sbjct: 3   MDIDSPAESNSLP---PRYRIVQRLSLQGVPEEHLERLEPGLVAYVKENKFRVPELV-SA 58

Query: 384 VLPSDEEVIETIAVSKIENGEGGVIMKKGPKLKELFKE 497
           +LP++EEV+E     K  + E  V     P + E F+E
Sbjct: 59  ILPTEEEVLEAYKECKASSKEDLV----SPTMTEQFRE 92


>ref|XP_002532325.1| ubiquitin ligase E3 alpha, putative [Ricinus communis]
           gi|223527968|gb|EEF30052.1| ubiquitin ligase E3 alpha,
           putative [Ricinus communis]
          Length = 2073

 Score = 56.6 bits (135), Expect = 2e-06
 Identities = 34/103 (33%), Positives = 62/103 (60%), Gaps = 1/103 (0%)
 Frame = +3

Query: 204 MEIDSSYPSTGLAGLDPRDRILLKLSKIGVPEDRIEQGER-GLVAYLKENKSKLHDVVLY 380
           M+IDS  P   +  + PRDR++ +L ++G+ E+ +++    G+VA+L +N S + ++V  
Sbjct: 1   MDIDS--PPETINPIKPRDRVMRRLVQLGIGEEYLQRRYYPGIVAFLMDNPSWIPELVS- 57

Query: 381 GVLPSDEEVIETIAVSKIENGEGGVIMKKGPKLKELFKECVHW 509
            +LP DEEV E +  +K E+ +      + P +K  F+EC+ W
Sbjct: 58  SILPLDEEVAEALQQNKSESKK-----VQSPTMKRYFRECMVW 95


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