BLASTX nr result

ID: Papaver23_contig00028464 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Papaver23_contig00028464
         (456 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

emb|CCA66044.1| hypothetical protein [Beta vulgaris subsp. vulga...    89   3e-26
gb|AFP55574.1| non-ltr retroelement reverse transcriptase [Rosa ...    87   6e-25
gb|AAD20714.1| putative non-LTR retroelement reverse transcripta...    77   1e-24
gb|AAD24831.1| putative non-LTR retroelement reverse transcripta...    77   1e-24
emb|CAB75484.1| putative protein [Arabidopsis thaliana]                79   1e-24

>emb|CCA66044.1| hypothetical protein [Beta vulgaris subsp. vulgaris]
          Length = 1355

 Score = 88.6 bits (218), Expect(2) = 3e-26
 Identities = 40/80 (50%), Positives = 55/80 (68%)
 Frame = +2

Query: 11  SQINHTHLTLIPKTKNPENPSQFRPIGLCNVSYKVISKIIVAXXXXXXXXXINPHQSAFI 190
           S INHT++ LIPK KNP  P++FRPI LCNV YK++SK +V          ++ +QSAF+
Sbjct: 486 SCINHTNIALIPKVKNPTTPAEFRPIALCNVVYKLVSKALVIRLKDFLPRLVSENQSAFV 545

Query: 191 PNRSIQDNIAMAMELFHMIR 250
           P R I DN  +AME+FH ++
Sbjct: 546 PGRLITDNALIAMEVFHSMK 565



 Score = 55.1 bits (131), Expect(2) = 3e-26
 Identities = 28/63 (44%), Positives = 41/63 (65%)
 Frame = +1

Query: 259 TRKTTKIALKLDIHKAYDKLDWKFIERAMNTLGLPNWLVNRIMFCIKSVSLAVKINGAPH 438
           +RK T IA+KLD+ KAYD+++W F+ + + T+G     VN IM C+ SVS +  ING   
Sbjct: 570 SRKGT-IAMKLDMSKAYDRVEWGFLRKLLLTMGFDGRWVNLIMSCVSSVSYSFIINGGVC 628

Query: 439 GFI 447
           G +
Sbjct: 629 GSV 631


>gb|AFP55574.1| non-ltr retroelement reverse transcriptase [Rosa rugosa]
          Length = 1656

 Score = 86.7 bits (213), Expect(2) = 6e-25
 Identities = 38/81 (46%), Positives = 56/81 (69%)
 Frame = +2

Query: 17   INHTHLTLIPKTKNPENPSQFRPIGLCNVSYKVISKIIVAXXXXXXXXXINPHQSAFIPN 196
            +N THL LIPK K P +PS +RPI LCN SYK+++KII +         I+ +QSAF+ N
Sbjct: 1093 MNRTHLALIPKVKAPTHPSHYRPIALCNFSYKILTKIIASRLQPFMSELISDNQSAFVSN 1152

Query: 197  RSIQDNIAMAMELFHMIRTSQ 259
            R IQDN+ +A E++H ++ ++
Sbjct: 1153 RQIQDNVIIAHEIYHHLKLTR 1173



 Score = 52.4 bits (124), Expect(2) = 6e-25
 Identities = 21/51 (41%), Positives = 35/51 (68%)
 Frame = +1

Query: 283  LKLDIHKAYDKLDWKFIERAMNTLGLPNWLVNRIMFCIKSVSLAVKINGAP 435
            LKLD++KAYD+++W F+E  +  +G  +  +  +M C+ + SL+V ING P
Sbjct: 1182 LKLDMNKAYDRVEWNFLEAVLRKMGFVDSWIGLVMSCVTTSSLSVLINGKP 1232


>gb|AAD20714.1| putative non-LTR retroelement reverse transcriptase [Arabidopsis
            thaliana]
          Length = 1750

 Score = 76.6 bits (187), Expect(2) = 1e-24
 Identities = 36/78 (46%), Positives = 49/78 (62%)
 Frame = +2

Query: 17   INHTHLTLIPKTKNPENPSQFRPIGLCNVSYKVISKIIVAXXXXXXXXXINPHQSAFIPN 196
            INHT++ +IPK  NP   S +RPI LCNV YKVISK +V          ++  Q+AFIP 
Sbjct: 866  INHTNICMIPKITNPTTLSDYRPIALCNVLYKVISKCLVNRLKSHLNSIVSDSQAAFIPG 925

Query: 197  RSIQDNIAMAMELFHMIR 250
            R I DN+ +A E+ H ++
Sbjct: 926  RIINDNVMIAHEVMHSLK 943



 Score = 61.2 bits (147), Expect(2) = 1e-24
 Identities = 27/59 (45%), Positives = 39/59 (66%)
 Frame = +1

Query: 271  TKIALKLDIHKAYDKLDWKFIERAMNTLGLPNWLVNRIMFCIKSVSLAVKINGAPHGFI 447
            T +A+K D+ KAYD+++W F+E  M   G  N  +  IM  +KSV  +V ING+PHG+I
Sbjct: 951  TYMAVKTDVSKAYDRVEWDFLETTMRLFGFCNKWIGWIMAAVKSVHYSVLINGSPHGYI 1009


>gb|AAD24831.1| putative non-LTR retroelement reverse transcriptase [Arabidopsis
           thaliana]
          Length = 1524

 Score = 76.6 bits (187), Expect(2) = 1e-24
 Identities = 36/78 (46%), Positives = 49/78 (62%)
 Frame = +2

Query: 17  INHTHLTLIPKTKNPENPSQFRPIGLCNVSYKVISKIIVAXXXXXXXXXINPHQSAFIPN 196
           INHT++ +IPK  NP   S +RPI LCNV YKVISK +V          ++  Q+AFIP 
Sbjct: 640 INHTNICMIPKITNPTTLSDYRPIALCNVLYKVISKCLVNRLKSHLNSIVSDSQAAFIPG 699

Query: 197 RSIQDNIAMAMELFHMIR 250
           R I DN+ +A E+ H ++
Sbjct: 700 RIINDNVMIAHEVMHSLK 717



 Score = 61.2 bits (147), Expect(2) = 1e-24
 Identities = 27/59 (45%), Positives = 39/59 (66%)
 Frame = +1

Query: 271 TKIALKLDIHKAYDKLDWKFIERAMNTLGLPNWLVNRIMFCIKSVSLAVKINGAPHGFI 447
           T +A+K D+ KAYD+++W F+E  M   G  N  +  IM  +KSV  +V ING+PHG+I
Sbjct: 725 TYMAVKTDVSKAYDRVEWDFLETTMRLFGFCNKWIGWIMAAVKSVHYSVLINGSPHGYI 783


>emb|CAB75484.1| putative protein [Arabidopsis thaliana]
          Length = 851

 Score = 78.6 bits (192), Expect(2) = 1e-24
 Identities = 35/80 (43%), Positives = 52/80 (65%)
 Frame = +2

Query: 11  SQINHTHLTLIPKTKNPENPSQFRPIGLCNVSYKVISKIIVAXXXXXXXXXINPHQSAFI 190
           + +NHT++ +IPK +NP+  S +RPI LCNV YKVISK +V          ++  Q+AFI
Sbjct: 103 TSVNHTNICMIPKIQNPQTLSDYRPIALCNVLYKVISKCMVNRLKAHLNSIVSDSQAAFI 162

Query: 191 PNRSIQDNIAMAMELFHMIR 250
           P R I DN+ +A E+ H ++
Sbjct: 163 PGRIINDNVMIAHEIMHSLK 182



 Score = 59.3 bits (142), Expect(2) = 1e-24
 Identities = 26/59 (44%), Positives = 39/59 (66%)
 Frame = +1

Query: 271 TKIALKLDIHKAYDKLDWKFIERAMNTLGLPNWLVNRIMFCIKSVSLAVKINGAPHGFI 447
           T +A+K D+ KAYD+++W F+E  M   G  +  +  IM  +KSV  +V ING+PHG+I
Sbjct: 190 TYMAVKTDVSKAYDRVEWDFLETTMRLFGFCDKWIGWIMAAVKSVHYSVLINGSPHGYI 248


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