BLASTX nr result

ID: Papaver23_contig00028188 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Papaver23_contig00028188
         (587 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

emb|CAN69116.1| hypothetical protein VITISV_031843 [Vitis vinifera]    94   2e-17
ref|XP_002284795.1| PREDICTED: F-box protein SKIP23-like [Vitis ...    92   6e-17
ref|XP_002300674.1| predicted protein [Populus trichocarpa] gi|2...    87   3e-15
ref|XP_002510618.1| ubiquitin-protein ligase, putative [Ricinus ...    82   5e-14
ref|XP_002510609.1| conserved hypothetical protein [Ricinus comm...    74   2e-11

>emb|CAN69116.1| hypothetical protein VITISV_031843 [Vitis vinifera]
          Length = 389

 Score = 93.6 bits (231), Expect = 2e-17
 Identities = 69/196 (35%), Positives = 102/196 (52%), Gaps = 7/196 (3%)
 Frame = +3

Query: 21  QDVIFHKDQFYALDACGRVGILDFNSTNDSPKLVRISYDNNSGQLICGDKEYLVEDSSGS 200
           +DVIFH+  FYA++  G + + D + +  SP++  I      G    GD +YLVE S   
Sbjct: 210 EDVIFHRGLFYAVNKYGSIAVCDVSGS--SPRVSIIEMPQQFG----GDLQYLVE-SGEE 262

Query: 201 LLLVTR--SISYLRKGHQA-----TRSFNVFKIEEQSGSLYVFKVNSIGGDAIFLGPNSS 359
           LLLVTR   ++Y  +  Q      T  F V +++ ++    V  V+S+G  A+FLG N S
Sbjct: 263 LLLVTRYLDLTYDVEXDQTSLIYRTTRFQVCRLDSKAPRWEV--VSSLGDRALFLGENLS 320

Query: 360 VCMFIEEGLIRAGGCQRNCIYFSDTPDTWVHPSTSRFHDLGVFDLEDGSIKPLPIHEQQH 539
           + +      +   GC+ NCIY++D      +       DLG+F+LEDGSI+PLP      
Sbjct: 321 LSL----SSVDFPGCKGNCIYYTDDYSEDNYDGIGGEQDLGIFNLEDGSIEPLPCSH--- 373

Query: 540 PKFCLNHQMPTWVTPN 587
             F +    P WVTPN
Sbjct: 374 --FRIRWPPPLWVTPN 387


>ref|XP_002284795.1| PREDICTED: F-box protein SKIP23-like [Vitis vinifera]
          Length = 389

 Score = 92.0 bits (227), Expect = 6e-17
 Identities = 69/196 (35%), Positives = 102/196 (52%), Gaps = 7/196 (3%)
 Frame = +3

Query: 21  QDVIFHKDQFYALDACGRVGILDFNSTNDSPKLVRISYDNNSGQLICGDKEYLVEDSSGS 200
           +DVIFH+  FYA++  G + + D + +  SP++  I      G    GD +YLVE S   
Sbjct: 210 EDVIFHRGLFYAVNKYGSIAVCDVSGS--SPRVSIIEMPQQFG----GDLQYLVE-SGEE 262

Query: 201 LLLVTR--SISYLRKGHQA-----TRSFNVFKIEEQSGSLYVFKVNSIGGDAIFLGPNSS 359
           LLLVTR   ++Y  +  Q      T  F V +++ ++    V  V+S+G  A+FLG N S
Sbjct: 263 LLLVTRYLDLTYDVEPDQTSLIYRTTRFQVCRLDLKAPRWEV--VSSLGDRALFLGENLS 320

Query: 360 VCMFIEEGLIRAGGCQRNCIYFSDTPDTWVHPSTSRFHDLGVFDLEDGSIKPLPIHEQQH 539
           + +      +   GC+ NCIY++D      +       DLG+F+LEDGSI+PLP      
Sbjct: 321 LSL----SSVDFPGCKGNCIYYTDDYSEDNYDGIGGEQDLGIFNLEDGSIEPLPCSH--- 373

Query: 540 PKFCLNHQMPTWVTPN 587
             F +    P WVTPN
Sbjct: 374 --FRIRWPPPLWVTPN 387


>ref|XP_002300674.1| predicted protein [Populus trichocarpa] gi|222842400|gb|EEE79947.1|
           predicted protein [Populus trichocarpa]
          Length = 393

 Score = 86.7 bits (213), Expect = 3e-15
 Identities = 67/196 (34%), Positives = 101/196 (51%), Gaps = 7/196 (3%)
 Frame = +3

Query: 21  QDVIFHKDQFYALDACGRVGILDFNSTNDSPKLVRISYDNNSGQLICGDKEYLVEDSSGS 200
           +DVI+    FYA++  G++ + D N   +SPK+  I      G    GD +YLV    G 
Sbjct: 214 EDVIYFNGLFYAVNKAGQIVVCDVNG--NSPKVSFIETPRQIG----GDMQYLVSSGDG- 266

Query: 201 LLLVTRSIS-------YLRKGHQATRSFNVFKIEEQSGSLYVFKVNSIGGDAIFLGPNSS 359
           LLLVTR +        ++ K    T  F VFK++  +G  +  +V S+G   +F+G NSS
Sbjct: 267 LLLVTRYLDLDVEFDIFIYK----TARFEVFKLD-LNGPRWE-RVTSLGDMMLFIGENSS 320

Query: 360 VCMFIEEGLIRAGGCQRNCIYFSDTPDTWVHPSTSRFHDLGVFDLEDGSIKPLPIHEQQH 539
           + +    GL    GC  +CIY++D      +      HDLG+F L DGSI+PLP +  ++
Sbjct: 321 LALSAS-GL---SGCMGDCIYYTDDYSANNYDGHIGEHDLGIFKLSDGSIEPLPCY-PRN 375

Query: 540 PKFCLNHQMPTWVTPN 587
               L    P W++PN
Sbjct: 376 SYSRLQWPPPLWISPN 391


>ref|XP_002510618.1| ubiquitin-protein ligase, putative [Ricinus communis]
           gi|223551319|gb|EEF52805.1| ubiquitin-protein ligase,
           putative [Ricinus communis]
          Length = 398

 Score = 82.4 bits (202), Expect = 5e-14
 Identities = 64/198 (32%), Positives = 104/198 (52%), Gaps = 9/198 (4%)
 Frame = +3

Query: 21  QDVIFHKDQFYALDACGRVGILDFNSTNDSPKLVRISYDNNSGQLICGDKEYLVEDSSGS 200
           +DVIF    FYA++  G++ I D +S  DSP++  +     +G    GD +YLV +S   
Sbjct: 213 EDVIFVNGMFYAVNKAGQIVICDISS--DSPRVSFMETPRQAG----GDMQYLV-NSGDE 265

Query: 201 LLLVTRSISYL-------RKGHQATRS--FNVFKIEEQSGSLYVFKVNSIGGDAIFLGPN 353
           LLLVTR +           + H   R+  F VF+++  +G  ++ +++++G  A+F+G N
Sbjct: 266 LLLVTRYLDLEYEFDHPDMEPHLIYRTIRFEVFRLD-WNGPQWL-RMSTLGDKALFIGEN 323

Query: 354 SSVCMFIEEGLIRAGGCQRNCIYFSDTPDTWVHPSTSRFHDLGVFDLEDGSIKPLPIHEQ 533
           SS+ +   +      GC  NCIY++D      +      HDLG+F L D +I+PLP + +
Sbjct: 324 SSLSLSATD----FSGCMGNCIYYTDDYLDANYDGHFGDHDLGIFKLCDETIEPLPCYPR 379

Query: 534 QHPKFCLNHQMPTWVTPN 587
                 L    P WV+PN
Sbjct: 380 NFTS-PLQWSPPLWVSPN 396


>ref|XP_002510609.1| conserved hypothetical protein [Ricinus communis]
           gi|223551310|gb|EEF52796.1| conserved hypothetical
           protein [Ricinus communis]
          Length = 406

 Score = 73.6 bits (179), Expect = 2e-11
 Identities = 56/173 (32%), Positives = 88/173 (50%), Gaps = 3/173 (1%)
 Frame = +3

Query: 9   EFNIQDVIFHKDQFYALDACGRVGILDFNSTNDSPKLVRISYDNNSGQLICGDKEYLVED 188
           E + QDV+FH+ +FY ++  GRV I     T+ +P  V    D     L+ G K++ +  
Sbjct: 204 EIHYQDVMFHRGKFYMVNDKGRVSIC---ITDINPPSVIHVADPPPVPLLMGYKQWYLAT 260

Query: 189 SSGSLLLVTRSISYLRKGHQ-ATRSFNVFKIEEQSGSLYVFKVNSIGGDAIFLGPNSSVC 365
            +  L+LV R  +Y   G++  T  F V+K++  S +    K++ +G    FLG N    
Sbjct: 261 LNEDLILVGRFRNYRVSGYEYQTHKFIVYKLDSSSSNW--SKLDGLGDMIFFLGWN---- 314

Query: 366 MFIEEGLIRAGGCQRNCIYFSDTPDTWVHPSTSRF--HDLGVFDLEDGSIKPL 518
            F        G C  NCIYF+D  D ++  S   +  HD GVF+ +DGS++ L
Sbjct: 315 CFDSISAHNCGNCSGNCIYFTD--DNFIVDSDFSWEGHDYGVFNFDDGSVRRL 365


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