BLASTX nr result
ID: Papaver23_contig00028081
seq
BLASTX 2.2.25 [Feb-01-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= Papaver23_contig00028081
(773 letters)
Database: ./nr
23,641,837 sequences; 8,123,359,852 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
ref|XP_002278166.1| PREDICTED: pentatricopeptide repeat-containi... 224 2e-56
ref|XP_004160350.1| PREDICTED: pentatricopeptide repeat-containi... 212 8e-53
ref|XP_004137884.1| PREDICTED: pentatricopeptide repeat-containi... 212 8e-53
ref|XP_002512699.1| pentatricopeptide repeat-containing protein,... 189 4e-46
ref|XP_002303738.1| predicted protein [Populus trichocarpa] gi|2... 187 2e-45
>ref|XP_002278166.1| PREDICTED: pentatricopeptide repeat-containing protein At4g18750,
chloroplastic-like [Vitis vinifera]
Length = 662
Score = 224 bits (570), Expect = 2e-56
Identities = 118/212 (55%), Positives = 156/212 (73%), Gaps = 2/212 (0%)
Frame = +2
Query: 143 KVFEVIPDLENINSTYAWNNLIKTHL--GHHHYVLFIYQNMLLRGFRPDKHTFPRILTAS 316
++F+ IP +++T+AWNNLI+THL G V+ Y+ MLLRG RPDKHT PRILTA+
Sbjct: 48 QLFDEIP----VSNTFAWNNLIQTHLTNGDSDRVVSTYRQMLLRGVRPDKHTIPRILTAA 103
Query: 317 RNFDTLCSGKQIHAHALKFGFGSDKYVITALMELYGLFEGADSARRVFDQFSSQKNSVSW 496
R+ + GKQ+H HALK G S+ YVI+AL+E+YG +GA++A+ VF + S+++NSVSW
Sbjct: 104 RHTSSFSFGKQVHGHALKLGLSSESYVISALLEMYGRLDGANAAKLVFCK-SARRNSVSW 162
Query: 497 TLMARLYSREDKPGLAIETFHQMVTLGASGEERDLSVIDAVALSTVLVACGRLKALLEGK 676
TL++RLY EDKPGLA++ F QMV S ID +AL T +VACG LK+L EG+
Sbjct: 163 TLISRLYIMEDKPGLAVDMFKQMV--------ESKSEIDPLALVTAIVACGMLKSLQEGR 214
Query: 677 KIHEIARKSELESAVLVSNSLLKMYLDCGSIK 772
+HEIA+K LE+ VLVSNSLLKMY+DCGSIK
Sbjct: 215 YVHEIAKKCGLEADVLVSNSLLKMYIDCGSIK 246
Score = 70.1 bits (170), Expect = 5e-10
Identities = 47/148 (31%), Positives = 77/148 (52%)
Frame = +2
Query: 329 TLCSGKQIHAHALKFGFGSDKYVITALMELYGLFEGADSARRVFDQFSSQKNSVSWTLMA 508
+L G+ +H A K G +D V +L+++Y AR VFD+ S K+ +SWT +
Sbjct: 209 SLQEGRYVHEIAKKCGLEADVLVSNSLLKMYIDCGSIKDARAVFDRMPS-KDVISWTEIF 267
Query: 509 RLYSREDKPGLAIETFHQMVTLGASGEERDLSVIDAVALSTVLVACGRLKALLEGKKIHE 688
R Y + ++ F QM G D++A+S++L ACGR A +GK+IH
Sbjct: 268 RGYVKNGGFNEGLKLFRQMSMEGVKP--------DSLAISSILPACGRGAAHKQGKEIHA 319
Query: 689 IARKSELESAVLVSNSLLKMYLDCGSIK 772
++ ++ V V N++L MY+ G I+
Sbjct: 320 YLLRNGIDLNVTVQNAVLDMYVKSGFIE 347
Score = 63.2 bits (152), Expect = 6e-08
Identities = 48/189 (25%), Positives = 91/189 (48%), Gaps = 1/189 (0%)
Frame = +2
Query: 113 LNSSKLSTAPKVFEVIPDLENINSTYAWNNLIKTHLGHHHYVLFIYQNMLLRGFRPDKHT 292
++ + A VF+ +P + I+ T + +K G + L +++ M + G +PD
Sbjct: 240 IDCGSIKDARAVFDRMPSKDVISWTEIFRGYVKN--GGFNEGLKLFRQMSMEGVKPDSLA 297
Query: 293 FPRILTASRNFDTLCSGKQIHAHALKFGFGSDKYVITALMELYGLFEGADSARRVFDQFS 472
IL A GK+IHA+ L+ G + V A++++Y +SA ++F
Sbjct: 298 ISSILPACGRGAAHKQGKEIHAYLLRNGIDLNVTVQNAVLDMYVKSGFIESAAKIFAGM- 356
Query: 473 SQKNSVSWTLMARLYSREDKPGLAIETFHQMVTLGASGEERDLSV-IDAVALSTVLVACG 649
++++SWT+M YS + L ++ F +M E++ SV ID +A + L AC
Sbjct: 357 KDRDAISWTVMILGYSLHGQGELGVDLFRKM--------EKNSSVEIDQIAYAAALHACT 408
Query: 650 RLKALLEGK 676
+ + +G+
Sbjct: 409 TARLVEQGR 417
>ref|XP_004160350.1| PREDICTED: pentatricopeptide repeat-containing protein At4g18750,
chloroplastic-like [Cucumis sativus]
Length = 429
Score = 212 bits (539), Expect = 8e-53
Identities = 116/221 (52%), Positives = 152/221 (68%), Gaps = 2/221 (0%)
Frame = +2
Query: 116 NSSKLSTAPKVFEVIPDLENINSTYAWNNLIKTHL--GHHHYVLFIYQNMLLRGFRPDKH 289
N + L A +VF+ IP I T+AWNNLI+THL G +V+ Y+ ML RG RPDKH
Sbjct: 5 NYANLCVAHQVFDDIP----IWDTFAWNNLIQTHLTNGDLGHVISTYRQMLFRGVRPDKH 60
Query: 290 TFPRILTASRNFDTLCSGKQIHAHALKFGFGSDKYVITALMELYGLFEGADSARRVFDQF 469
T PRI+ A+R + L GKQ+HA A K GF S+ YV+T+L+ELYG+ + AD+A+ + D+
Sbjct: 61 TLPRIICATRQYGDLQVGKQLHAQAFKLGFSSNLYVLTSLIELYGILDSADTAKWLHDK- 119
Query: 470 SSQKNSVSWTLMARLYSREDKPGLAIETFHQMVTLGASGEERDLSVIDAVALSTVLVACG 649
S+ +NSVSWT++A+LY REDKP LA++ F+QMV L IDAVAL+T + ACG
Sbjct: 120 STCRNSVSWTVLAKLYLREDKPSLALDLFYQMVELADD--------IDAVALATAIGACG 171
Query: 650 RLKALLEGKKIHEIARKSELESAVLVSNSLLKMYLDCGSIK 772
LK L G+ IH +AR LE +LVSNSLLKMY+DC SIK
Sbjct: 172 ALKMLHHGRNIHHLARVHGLEFNILVSNSLLKMYIDCDSIK 212
Score = 67.4 bits (163), Expect = 3e-09
Identities = 55/205 (26%), Positives = 91/205 (44%), Gaps = 2/205 (0%)
Frame = +2
Query: 164 DLENINSTYAWNNLIKTHLGHHH--YVLFIYQNMLLRGFRPDKHTFPRILTASRNFDTLC 337
D ++ +W L K +L L ++ M+ D + A L
Sbjct: 118 DKSTCRNSVSWTVLAKLYLREDKPSLALDLFYQMVELADDIDAVALATAIGACGALKMLH 177
Query: 338 SGKQIHAHALKFGFGSDKYVITALMELYGLFEGADSARRVFDQFSSQKNSVSWTLMARLY 517
G+ IH A G + V +L+++Y + AR FDQ S K+ +SWT + +Y
Sbjct: 178 HGRNIHHLARVHGLEFNILVSNSLLKMYIDCDSIKDARGFFDQMPS-KDIISWTELIHMY 236
Query: 518 SREDKPGLAIETFHQMVTLGASGEERDLSVIDAVALSTVLVACGRLKALLEGKKIHEIAR 697
++ A + F QM GE + D +S++L ACGR+ A GK+IH
Sbjct: 237 VKKGGINEAFKLFRQM---NMDGELKP----DPRTISSILPACGRMAAHKHGKEIHGYVV 289
Query: 698 KSELESAVLVSNSLLKMYLDCGSIK 772
K+ + ++V N+L+ MY+ G I+
Sbjct: 290 KNAFDENLIVQNALVDMYVKSGCIQ 314
>ref|XP_004137884.1| PREDICTED: pentatricopeptide repeat-containing protein At4g18750,
chloroplastic-like [Cucumis sativus]
Length = 629
Score = 212 bits (539), Expect = 8e-53
Identities = 116/221 (52%), Positives = 152/221 (68%), Gaps = 2/221 (0%)
Frame = +2
Query: 116 NSSKLSTAPKVFEVIPDLENINSTYAWNNLIKTHL--GHHHYVLFIYQNMLLRGFRPDKH 289
N + L A +VF+ IP I T+AWNNLI+THL G +V+ Y+ ML RG RPDKH
Sbjct: 5 NYANLCVAHQVFDDIP----IWDTFAWNNLIQTHLTNGDLGHVISTYRQMLFRGVRPDKH 60
Query: 290 TFPRILTASRNFDTLCSGKQIHAHALKFGFGSDKYVITALMELYGLFEGADSARRVFDQF 469
T PRI+ A+R + L GKQ+HA A K GF S+ YV+T+L+ELYG+ + AD+A+ + D+
Sbjct: 61 TLPRIICATRQYGDLQVGKQLHAQAFKLGFSSNLYVLTSLIELYGILDSADTAKWLHDK- 119
Query: 470 SSQKNSVSWTLMARLYSREDKPGLAIETFHQMVTLGASGEERDLSVIDAVALSTVLVACG 649
S+ +NSVSWT++A+LY REDKP LA++ F+QMV L IDAVAL+T + ACG
Sbjct: 120 STCRNSVSWTVLAKLYLREDKPSLALDLFYQMVELADD--------IDAVALATAIGACG 171
Query: 650 RLKALLEGKKIHEIARKSELESAVLVSNSLLKMYLDCGSIK 772
LK L G+ IH +AR LE +LVSNSLLKMY+DC SIK
Sbjct: 172 ALKMLHHGRNIHHLARVHGLEFNILVSNSLLKMYIDCDSIK 212
Score = 67.4 bits (163), Expect = 3e-09
Identities = 55/205 (26%), Positives = 91/205 (44%), Gaps = 2/205 (0%)
Frame = +2
Query: 164 DLENINSTYAWNNLIKTHLGHHH--YVLFIYQNMLLRGFRPDKHTFPRILTASRNFDTLC 337
D ++ +W L K +L L ++ M+ D + A L
Sbjct: 118 DKSTCRNSVSWTVLAKLYLREDKPSLALDLFYQMVELADDIDAVALATAIGACGALKMLH 177
Query: 338 SGKQIHAHALKFGFGSDKYVITALMELYGLFEGADSARRVFDQFSSQKNSVSWTLMARLY 517
G+ IH A G + V +L+++Y + AR FDQ S K+ +SWT + +Y
Sbjct: 178 HGRNIHHLARVHGLEFNILVSNSLLKMYIDCDSIKDARGFFDQMPS-KDIISWTELIHMY 236
Query: 518 SREDKPGLAIETFHQMVTLGASGEERDLSVIDAVALSTVLVACGRLKALLEGKKIHEIAR 697
++ A + F QM GE + D +S++L ACGR+ A GK+IH
Sbjct: 237 VKKGGINEAFKLFRQM---NMDGELKP----DPRTISSILPACGRMAAHKHGKEIHGYVV 289
Query: 698 KSELESAVLVSNSLLKMYLDCGSIK 772
K+ + ++V N+L+ MY+ G I+
Sbjct: 290 KNAFDENLIVQNALVDMYVKSGCIQ 314
>ref|XP_002512699.1| pentatricopeptide repeat-containing protein, putative [Ricinus
communis] gi|223548660|gb|EEF50151.1| pentatricopeptide
repeat-containing protein, putative [Ricinus communis]
Length = 686
Score = 189 bits (481), Expect = 4e-46
Identities = 106/218 (48%), Positives = 141/218 (64%), Gaps = 3/218 (1%)
Frame = +2
Query: 128 LSTAPKVFEVIP-DLENINSTYAWNNLIKTHLGHHH--YVLFIYQNMLLRGFRPDKHTFP 298
L +A F + P D ++ T+AWNNLI +HL + L IY +MLLRG PD+ TFP
Sbjct: 42 LKSAHSAFPLQPLDEIPLSDTFAWNNLIHSHLTNRDPFSALSIYLHMLLRGALPDRRTFP 101
Query: 299 RILTASRNFDTLCSGKQIHAHALKFGFGSDKYVITALMELYGLFEGADSARRVFDQFSSQ 478
R+L ASR L GKQIHA ALKFGF SD YVI++L++ YG + D+AR +FD S
Sbjct: 102 RVLNASRLSTNLFLGKQIHAQALKFGFSSDPYVISSLIDFYGHLDSTDAARSLFDN-SPS 160
Query: 479 KNSVSWTLMARLYSREDKPGLAIETFHQMVTLGASGEERDLSVIDAVALSTVLVACGRLK 658
KNSVSWT++ARLY ++KP + + F+QM+ S+ D VAL+T L ACG L+
Sbjct: 161 KNSVSWTVLARLYLMQNKPDVVLSLFYQMLDFN--------SLFDPVALATALRACGMLR 212
Query: 659 ALLEGKKIHEIARKSELESAVLVSNSLLKMYLDCGSIK 772
++ GK +H A+K LE +LVSNSLLKMY+DC I+
Sbjct: 213 SMHHGKILHGFAKKCRLEFDILVSNSLLKMYVDCHCIE 250
Score = 60.1 bits (144), Expect = 5e-07
Identities = 51/196 (26%), Positives = 90/196 (45%), Gaps = 2/196 (1%)
Frame = +2
Query: 182 STYAWNNLIKTHLGHHH--YVLFIYQNMLLRGFRPDKHTFPRILTASRNFDTLCSGKQIH 355
++ +W L + +L + VL ++ ML D L A ++ GK +H
Sbjct: 162 NSVSWTVLARLYLMQNKPDVVLSLFYQMLDFNSLFDPVALATALRACGMLRSMHHGKILH 221
Query: 356 AHALKFGFGSDKYVITALMELYGLFEGADSARRVFDQFSSQKNSVSWTLMARLYSREDKP 535
A K D V +L+++Y + AR F Q + K+ +SWT + Y + +
Sbjct: 222 GFAKKCRLEFDILVSNSLLKMYVDCHCIEDARATFHQMPT-KDIISWTEIINGYVKIGEF 280
Query: 536 GLAIETFHQMVTLGASGEERDLSVIDAVALSTVLVACGRLKALLEGKKIHEIARKSELES 715
A++ F QM G D+++LST+L AC R A G++IH ++ +E
Sbjct: 281 NEALKLFRQMNIAGIRP--------DSLSLSTILPACARPAAHKLGREIHAYLLRNGIEL 332
Query: 716 AVLVSNSLLKMYLDCG 763
+++ N+L+ MY+ G
Sbjct: 333 NLMLQNALIDMYVKSG 348
>ref|XP_002303738.1| predicted protein [Populus trichocarpa] gi|222841170|gb|EEE78717.1|
predicted protein [Populus trichocarpa]
Length = 663
Score = 187 bits (476), Expect = 2e-45
Identities = 101/214 (47%), Positives = 142/214 (66%), Gaps = 2/214 (0%)
Frame = +2
Query: 125 KLSTAPKVFEVIPDLENINSTYAWNNLIKTHLGHHHY--VLFIYQNMLLRGFRPDKHTFP 298
+L+ KV + IP ++ T+AWNNLI THL + L IY +M++RG PD+ T P
Sbjct: 43 QLALTHKVLDEIP----LSDTFAWNNLIHTHLSNRDPGGALSIYHHMMMRGACPDRRTLP 98
Query: 299 RILTASRNFDTLCSGKQIHAHALKFGFGSDKYVITALMELYGLFEGADSARRVFDQFSSQ 478
R+LTASR L GKQ+H A+K GF + YVITAL+E+YG +G ++ + +FD+ S +
Sbjct: 99 RVLTASRICGDLFLGKQLHGQAIKLGFFDEHYVITALIEIYGRLDGIEAGKWLFDK-SPR 157
Query: 479 KNSVSWTLMARLYSREDKPGLAIETFHQMVTLGASGEERDLSVIDAVALSTVLVACGRLK 658
+NSV+WT++ +LY E+KP LAI F+QMV L A ID+V L T ACG LK
Sbjct: 158 RNSVAWTMILKLYLMENKPDLAINVFYQMVELNAR--------IDSVVLITAAGACGLLK 209
Query: 659 ALLEGKKIHEIARKSELESAVLVSNSLLKMYLDC 760
++ G+++H++ARK LES +LVSNSLLKM +DC
Sbjct: 210 SVEHGRRVHDVARKFRLESDILVSNSLLKMQIDC 243
Score = 59.7 bits (143), Expect = 7e-07
Identities = 47/198 (23%), Positives = 96/198 (48%), Gaps = 2/198 (1%)
Frame = +2
Query: 182 STYAWNNLIKTHLGHHH--YVLFIYQNMLLRGFRPDKHTFPRILTASRNFDTLCSGKQIH 355
++ AW ++K +L + + ++ M+ R D A ++ G+++H
Sbjct: 159 NSVAWTMILKLYLMENKPDLAINVFYQMVELNARIDSVVLITAAGACGLLKSVEHGRRVH 218
Query: 356 AHALKFGFGSDKYVITALMELYGLFEGADSARRVFDQFSSQKNSVSWTLMARLYSREDKP 535
A KF SD V +L+++ + + AR F+Q ++ K+ +SWT + Y ++ +
Sbjct: 219 DVARKFRLESDILVSNSLLKMQIDCQRMEDARGFFNQMTT-KDVISWTEIICGYVKKGEF 277
Query: 536 GLAIETFHQMVTLGASGEERDLSVIDAVALSTVLVACGRLKALLEGKKIHEIARKSELES 715
A++ F +M G D++++S+VL AC R A GK+IH + ++ +++
Sbjct: 278 NEALKLFRKMNMDGIKP--------DSLSVSSVLPACARTVAHKNGKEIHGYSLRNGMDN 329
Query: 716 AVLVSNSLLKMYLDCGSI 769
++V N+ MY G +
Sbjct: 330 NLIVQNATTDMYAKSGLV 347
Score = 56.2 bits (134), Expect = 8e-06
Identities = 46/191 (24%), Positives = 87/191 (45%), Gaps = 3/191 (1%)
Frame = +2
Query: 191 AWNNLIKTHL--GHHHYVLFIYQNMLLRGFRPDKHTFPRILTASRNFDTLCSGKQIHAHA 364
+W +I ++ G + L +++ M + G +PD + +L A +GK+IH ++
Sbjct: 263 SWTEIICGYVKKGEFNEALKLFRKMNMDGIKPDSLSVSSVLPACARTVAHKNGKEIHGYS 322
Query: 365 LKFGFGSDKYVITALMELYGLFEGADSARRVFDQFSSQKNSVSWTLMARLYSREDKPGLA 544
L+ G ++ V A ++Y D A +VF++ +++ +SWT+M +S K L
Sbjct: 323 LRNGMDNNLIVQNATTDMYAKSGLVDYALKVFERM-KKRDVISWTVMILGFSLHGKGELG 381
Query: 545 IETFHQMVTLGASGEERDLSV-IDAVALSTVLVACGRLKALLEGKKIHEIARKSELESAV 721
+E F +M E+D V D + VL C + EGK ++ +
Sbjct: 382 VELFCRM--------EKDQRVEADQFTYAAVLHCCTAACMVEEGKFYFNCIKEPNITHYA 433
Query: 722 LVSNSLLKMYL 754
L+ + L + L
Sbjct: 434 LMVSLLARACL 444