BLASTX nr result

ID: Papaver23_contig00027436 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Papaver23_contig00027436
         (659 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002520840.1| DNA binding protein, putative [Ricinus commu...    74   3e-11
ref|XP_003633450.1| PREDICTED: uncharacterized protein LOC100853...    72   1e-10
emb|CAN84129.1| hypothetical protein VITISV_041872 [Vitis vinifera]    72   1e-10
ref|XP_002325813.1| predicted protein [Populus trichocarpa] gi|2...    58   2e-06

>ref|XP_002520840.1| DNA binding protein, putative [Ricinus communis]
           gi|223539971|gb|EEF41549.1| DNA binding protein,
           putative [Ricinus communis]
          Length = 209

 Score = 73.6 bits (179), Expect = 3e-11
 Identities = 33/63 (52%), Positives = 45/63 (71%)
 Frame = -2

Query: 658 GNFFDADRKGFEKWKCMSFKERSPFVIEAEKVNLAYESILLKEVQVEPLMDDEADSAMVN 479
           G   + DRKGFE W+ MS +ER P+V++AE+VN AY   L+KE+ V   +DDEADS MV 
Sbjct: 90  GKLIEIDRKGFETWRKMSKQERKPYVVKAEEVNSAYVKSLIKEIDVSSEVDDEADSMMVG 149

Query: 478 RYD 470
           ++D
Sbjct: 150 KFD 152


>ref|XP_003633450.1| PREDICTED: uncharacterized protein LOC100853686 [Vitis vinifera]
          Length = 267

 Score = 71.6 bits (174), Expect = 1e-10
 Identities = 37/71 (52%), Positives = 46/71 (64%)
 Frame = -2

Query: 658 GNFFDADRKGFEKWKCMSFKERSPFVIEAEKVNLAYESILLKEVQVEPLMDDEADSAMVN 479
           GN    DR GFE WK MS +ER P++I+AEKVN  +  ILLKE      +DDEADSAMV 
Sbjct: 92  GNPIHVDRIGFEAWKKMSMEERKPYIIQAEKVNSEHLKILLKEEHDRVEVDDEADSAMVG 151

Query: 478 RYDMDIGEDDD 446
           ++D   G  +D
Sbjct: 152 KFDKFYGFYED 162


>emb|CAN84129.1| hypothetical protein VITISV_041872 [Vitis vinifera]
          Length = 217

 Score = 71.6 bits (174), Expect = 1e-10
 Identities = 37/71 (52%), Positives = 46/71 (64%)
 Frame = -2

Query: 658 GNFFDADRKGFEKWKCMSFKERSPFVIEAEKVNLAYESILLKEVQVEPLMDDEADSAMVN 479
           GN    DR GFE WK MS +ER P++I+AEKVN  +  ILLKE      +DDEADSAMV 
Sbjct: 92  GNPIHVDRIGFEAWKKMSMEERKPYIIQAEKVNSEHLKILLKEEHDRVEVDDEADSAMVG 151

Query: 478 RYDMDIGEDDD 446
           ++D   G  +D
Sbjct: 152 KFDKFYGFYED 162


>ref|XP_002325813.1| predicted protein [Populus trichocarpa] gi|222862688|gb|EEF00195.1|
           predicted protein [Populus trichocarpa]
          Length = 164

 Score = 57.8 bits (138), Expect = 2e-06
 Identities = 25/62 (40%), Positives = 42/62 (67%)
 Frame = -2

Query: 655 NFFDADRKGFEKWKCMSFKERSPFVIEAEKVNLAYESILLKEVQVEPLMDDEADSAMVNR 476
           N  D DRKGFE W+ MS +ER P++  A+++  A+   L++++     ++DEADSA+V +
Sbjct: 91  NTIDIDRKGFETWRNMSKEERQPYITRADEIYSAHVKSLIQDIDHMSEVNDEADSAIVGK 150

Query: 475 YD 470
           +D
Sbjct: 151 FD 152


Top