BLASTX nr result

ID: Papaver23_contig00027193 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Papaver23_contig00027193
         (812 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002305447.1| chromatin remodeling complex subunit [Populu...   129   6e-28
ref|XP_002273814.1| PREDICTED: DNA repair and recombination prot...   112   7e-23
emb|CAN62867.1| hypothetical protein VITISV_015925 [Vitis vinifera]   112   7e-23
ref|XP_002275596.1| PREDICTED: DNA repair and recombination prot...   110   4e-22
emb|CBI38030.3| unnamed protein product [Vitis vinifera]              110   5e-22

>ref|XP_002305447.1| chromatin remodeling complex subunit [Populus trichocarpa]
            gi|222848411|gb|EEE85958.1| chromatin remodeling complex
            subunit [Populus trichocarpa]
          Length = 630

 Score =  129 bits (325), Expect = 6e-28
 Identities = 101/267 (37%), Positives = 141/267 (52%), Gaps = 19/267 (7%)
 Frame = -2

Query: 811  FNILNFVLPEFLKLDTSKNVLRRITSGVQI-AVRKQIKSGEADVMF*DLVEETVQNDQDF 635
            FN+LN V P+FL++DTS+ +++RI S V I   RKQ K+G AD  F DLVE+T+Q DQDF
Sbjct: 277  FNVLNLVRPKFLRMDTSRAIVKRILSKVNIPGARKQFKAG-ADAAFYDLVEQTIQKDQDF 335

Query: 634  QRKVTMIQNLCEMR-------QGGSLDELPGLVGFTVLLTLNPKQKHAVVKMKKLD-TFK 479
            +RKVT+I++L EM        +G  LDELPGLV FT++L L+ +QKH V K+KKL   FK
Sbjct: 336  KRKVTVIRDLHEMTSKVLHYYKGDFLDELPGLVDFTLMLNLSSRQKHEVKKLKKLAMKFK 395

Query: 478  RSSISRTC*SDCTSHF*LQTETCSRENEKINTFKRSSMKSSVCVRPHLKEYSES*TTEDK 299
            RSS+                 +    + K+N+F ++S  +   +   L+        + K
Sbjct: 396  RSSVG----------------SAVYLHPKLNSFSKNSAITDDMMDDLLETVDVRDGVKAK 439

Query: 298  GHIN---------EAIFFFFDYIAAL*ICCR*SF-*RGWW*RLEVEA*GRK*SSSRPPQA 149
              +N         E +  F  Y+  L    R     +GW    E+     + SS      
Sbjct: 440  FFLNILSLCESAGEKLLVFSQYLTPLKFLERLVMKVKGWILGKEIFVISGESSSD----- 494

Query: 148  RSKGKYQGFNNSKDAKVFFVSIKAC*E 68
              +   + FNNS DAKVFF SIKAC E
Sbjct: 495  HREWSMERFNNSMDAKVFFGSIKACGE 521



 Score = 66.6 bits (161), Expect = 6e-09
 Identities = 43/86 (50%), Positives = 56/86 (65%), Gaps = 6/86 (6%)
 Frame = -1

Query: 242 LLPLKFLERLVVKTRG*SLGKEVVVISAASS*EQRE--ISGF*QF*RCK----SLLCFNK 81
           L PLKFLERLV+K +G  LGKE+ VIS  SS + RE  +  F      K    S+    +
Sbjct: 462 LTPLKFLERLVMKVKGWILGKEIFVISGESSSDHREWSMERFNNSMDAKVFFGSIKACGE 521

Query: 80  GMLGIMGASRLVILDIHLNPSVTRQA 3
           G + ++GASR++ILD+HLNPSVT QA
Sbjct: 522 G-ISLVGASRIIILDVHLNPSVTCQA 546


>ref|XP_002273814.1| PREDICTED: DNA repair and recombination protein RAD54-like [Vitis
            vinifera]
          Length = 903

 Score =  112 bits (281), Expect = 7e-23
 Identities = 93/260 (35%), Positives = 132/260 (50%), Gaps = 12/260 (4%)
 Frame = -2

Query: 811  FNILNFVLPEFLKLDTSKNVLRRITSGVQI-AVRKQIKSGEADVMF*DLVEETVQNDQDF 635
            FNILN V P+FLKL++S+ V++RI S V I  VRKQ+KS  AD  + DLVE T+Q D +F
Sbjct: 541  FNILNLVRPKFLKLESSRAVVKRIMSKVDIMGVRKQLKSNAADAFY-DLVENTLQKDDNF 599

Query: 634  QRKVTMIQNLCEMR-------QGGSLDELPGLVGFTVLLTLNPKQKHAVVKMKKLD-TFK 479
            +RK+T+IQ+L EM        +G  LDELPGLV FTVLL L+ +QK  V  + K +  FK
Sbjct: 600  RRKITVIQDLREMTSKVLHYYKGDFLDELPGLVDFTVLLNLSARQKKEVGNLNKFERKFK 659

Query: 478  RSSISRTC*SDCTSHF*LQTETC--SRENEKINTFKRSSMKSSVCVRPHLKEYSES*TTE 305
            ++S+           +  +      S+ +E     K   +   + VR  +K         
Sbjct: 660  KNSVGSAVYLHPQLKYFAEKLAANESKTDEMTCQKKMDEILEQLDVRDGVKAKFFLNVLA 719

Query: 304  DKGHINEAIFFFFDYIAAL*ICCR*SF-*RGWW*RLEVEA*GRK*SSSRPPQARSKGKYQ 128
                  E +  F  Y+  L    + +   +GW    E+ A      S      + +   +
Sbjct: 720  LCQSSGEKLLVFSQYLLPLRFLEKLTMKVKGWSPGKEIFA-----ISGESSSEQREWSME 774

Query: 127  GFNNSKDAKVFFVSIKAC*E 68
             FN S DA+VFF SIKAC E
Sbjct: 775  RFNTSPDARVFFGSIKACGE 794



 Score = 67.4 bits (163), Expect = 4e-09
 Identities = 42/86 (48%), Positives = 55/86 (63%), Gaps = 6/86 (6%)
 Frame = -1

Query: 242 LLPLKFLERLVVKTRG*SLGKEVVVISAASS*EQREISGF*QF*RCKSLLCFNKGM---- 75
           LLPL+FLE+L +K +G S GKE+  IS  SS EQRE S   +F        F   +    
Sbjct: 735 LLPLRFLEKLTMKVKGWSPGKEIFAISGESSSEQREWS-MERFNTSPDARVFFGSIKACG 793

Query: 74  --LGIMGASRLVILDIHLNPSVTRQA 3
             + ++GASR++ILD+HLNPSVTRQA
Sbjct: 794 EGISLVGASRVLILDVHLNPSVTRQA 819


>emb|CAN62867.1| hypothetical protein VITISV_015925 [Vitis vinifera]
          Length = 1187

 Score =  112 bits (281), Expect = 7e-23
 Identities = 93/260 (35%), Positives = 132/260 (50%), Gaps = 12/260 (4%)
 Frame = -2

Query: 811  FNILNFVLPEFLKLDTSKNVLRRITSGVQI-AVRKQIKSGEADVMF*DLVEETVQNDQDF 635
            FNILN V P+FLKL++S+ V++RI S V I  VRKQ+KS  AD  + DLVE T+Q D +F
Sbjct: 767  FNILNLVRPKFLKLESSRAVVKRIMSKVDIMGVRKQLKSNAADAFY-DLVENTLQKDDNF 825

Query: 634  QRKVTMIQNLCEMR-------QGGSLDELPGLVGFTVLLTLNPKQKHAVVKMKKLD-TFK 479
            +RK+T+IQ+L EM        +G  LDELPGLV FTVLL L+ +QK  V  + K +  FK
Sbjct: 826  RRKITVIQDLREMTSKVLHYYKGDFLDELPGLVDFTVLLNLSARQKKEVGNLNKFERKFK 885

Query: 478  RSSISRTC*SDCTSHF*LQTETC--SRENEKINTFKRSSMKSSVCVRPHLKEYSES*TTE 305
            ++S+           +  +      S+ +E     K   +   + VR  +K         
Sbjct: 886  KNSVGSAVYLHPQLKYFAEKLAANESKTDEMTCQKKMDEILEQLDVRDGVKAKFFLNVLA 945

Query: 304  DKGHINEAIFFFFDYIAAL*ICCR*SF-*RGWW*RLEVEA*GRK*SSSRPPQARSKGKYQ 128
                  E +  F  Y+  L    + +   +GW    E+ A      S      + +   +
Sbjct: 946  LCQSSGEKLLVFSQYLLPLRFLEKLTMKVKGWSPGKEIFA-----ISGESSSEQREWSME 1000

Query: 127  GFNNSKDAKVFFVSIKAC*E 68
             FN S DA+VFF SIKAC E
Sbjct: 1001 RFNTSPDARVFFGSIKACGE 1020



 Score = 67.4 bits (163), Expect = 4e-09
 Identities = 42/86 (48%), Positives = 55/86 (63%), Gaps = 6/86 (6%)
 Frame = -1

Query: 242  LLPLKFLERLVVKTRG*SLGKEVVVISAASS*EQREISGF*QF*RCKSLLCFNKGM---- 75
            LLPL+FLE+L +K +G S GKE+  IS  SS EQRE S   +F        F   +    
Sbjct: 961  LLPLRFLEKLTMKVKGWSPGKEIFAISGESSSEQREWS-MERFNTSPDARVFFGSIKACG 1019

Query: 74   --LGIMGASRLVILDIHLNPSVTRQA 3
              + ++GASR++ILD+HLNPSVTRQA
Sbjct: 1020 EGISLVGASRVLILDVHLNPSVTRQA 1045


>ref|XP_002275596.1| PREDICTED: DNA repair and recombination protein RAD54-like [Vitis
            vinifera]
          Length = 944

 Score =  110 bits (275), Expect = 4e-22
 Identities = 91/260 (35%), Positives = 130/260 (50%), Gaps = 12/260 (4%)
 Frame = -2

Query: 811  FNILNFVLPEFLKLDTSKNVLRRITSGVQI-AVRKQIKSGEADVMF*DLVEETVQNDQDF 635
            FNILN V P+FLKL++S+ +++RI S V I  VRKQ+KS  AD  + DLVE T+Q D +F
Sbjct: 582  FNILNLVRPKFLKLESSRAIVKRIMSKVDIMGVRKQLKSNAADAFY-DLVENTLQKDDNF 640

Query: 634  QRKVTMIQNLCEMR-------QGGSLDELPGLVGFTVLLTLNPKQKHAVVKMKKLD-TFK 479
            +RK+T+IQ+L EM        +G  LDELPGLV FTVLL L+ +QK  V  + K +  FK
Sbjct: 641  RRKITVIQDLREMTSKVLHYYKGDFLDELPGLVDFTVLLNLSARQKKEVGNLNKFERKFK 700

Query: 478  RSSISRTC*SDCTSHF*LQTETC--SRENEKINTFKRSSMKSSVCVRPHLKEYSES*TTE 305
            ++S+           +  +      S+ +E     K   +   + VR  +K         
Sbjct: 701  KNSVGSAVYLHPQLKYFAEKLAANESKTDEMTYQKKMDEILEQLDVREGVKVKFFLNVLA 760

Query: 304  DKGHINEAIFFFFDYIAAL*ICCR*SF-*RGWW*RLEVEA*GRK*SSSRPPQARSKGKYQ 128
                  E +  F  Y+  L    + +    GW    E+        S      + +   +
Sbjct: 761  LCQSAGEKLLVFSQYLLPLRFLEKLTMKVNGWSSGKEIFV-----ISGESSSEQREWSME 815

Query: 127  GFNNSKDAKVFFVSIKAC*E 68
             FN S DA+VFF SIKAC E
Sbjct: 816  RFNTSPDARVFFGSIKACGE 835



 Score = 68.6 bits (166), Expect = 2e-09
 Identities = 43/86 (50%), Positives = 55/86 (63%), Gaps = 6/86 (6%)
 Frame = -1

Query: 242  LLPLKFLERLVVKTRG*SLGKEVVVISAASS*EQREISGF*QF*RCKSLLCFNKGM---- 75
            LLPL+FLE+L +K  G S GKE+ VIS  SS EQRE S   +F        F   +    
Sbjct: 776  LLPLRFLEKLTMKVNGWSSGKEIFVISGESSSEQREWS-MERFNTSPDARVFFGSIKACG 834

Query: 74   --LGIMGASRLVILDIHLNPSVTRQA 3
              + ++GASR++ILD+HLNPSVTRQA
Sbjct: 835  EGISLVGASRVLILDVHLNPSVTRQA 860


>emb|CBI38030.3| unnamed protein product [Vitis vinifera]
          Length = 856

 Score =  110 bits (274), Expect = 5e-22
 Identities = 90/260 (34%), Positives = 125/260 (48%), Gaps = 12/260 (4%)
 Frame = -2

Query: 811  FNILNFVLPEFLKLDTSKNVLRRITSGVQI-AVRKQIKSGEADVMF*DLVEETVQNDQDF 635
            FNILN V P+FLKL++S+ V++RI S V I  VRKQ+KS  AD  + DLVE T+Q D +F
Sbjct: 524  FNILNLVRPKFLKLESSRAVVKRIMSKVDIMGVRKQLKSNAADAFY-DLVENTLQKDDNF 582

Query: 634  QRKVTMIQNLCEMR-------QGGSLDELPGLVGFTVLLTLNPKQKHAVVKMKKLD-TFK 479
            +RK+T+IQ+L EM        +G  LDELPGLV FTVLL L+ +QK  V  + K +  FK
Sbjct: 583  RRKITVIQDLREMTSKVLHYYKGDFLDELPGLVDFTVLLNLSARQKKEVGNLNKFERKFK 642

Query: 478  RSSISR--TC*SDCTSHF*LQT-ETCSRENEKINTFKRSSMKSSVCVRPHLKEYSES*TT 308
            ++S+ +         + F L     C    EK+  F +  +      +  +K        
Sbjct: 643  KNSVGKQLDVRDGVKAKFFLNVLALCQSSGEKLLVFSQYLLPLRFLEKLTMKV------- 695

Query: 307  EDKGHINEAIFFFFDYIAAL*ICCR*SF*RGWW*RLEVEA*GRK*SSSRPPQARSKGKYQ 128
                                         +GW    E+ A      S      + +   +
Sbjct: 696  -----------------------------KGWSPGKEIFA-----ISGESSSEQREWSME 721

Query: 127  GFNNSKDAKVFFVSIKAC*E 68
             FN S DA+VFF SIKAC E
Sbjct: 722  RFNTSPDARVFFGSIKACGE 741



 Score = 67.4 bits (163), Expect = 4e-09
 Identities = 42/86 (48%), Positives = 55/86 (63%), Gaps = 6/86 (6%)
 Frame = -1

Query: 242 LLPLKFLERLVVKTRG*SLGKEVVVISAASS*EQREISGF*QF*RCKSLLCFNKGM---- 75
           LLPL+FLE+L +K +G S GKE+  IS  SS EQRE S   +F        F   +    
Sbjct: 682 LLPLRFLEKLTMKVKGWSPGKEIFAISGESSSEQREWS-MERFNTSPDARVFFGSIKACG 740

Query: 74  --LGIMGASRLVILDIHLNPSVTRQA 3
             + ++GASR++ILD+HLNPSVTRQA
Sbjct: 741 EGISLVGASRVLILDVHLNPSVTRQA 766


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