BLASTX nr result

ID: Papaver23_contig00027172 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Papaver23_contig00027172
         (462 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002275953.1| PREDICTED: succinyl-CoA ligase [ADP-forming]...    47   6e-06

>ref|XP_002275953.1| PREDICTED: succinyl-CoA ligase [ADP-forming] subunit beta,
           mitochondrial [Vitis vinifera]
           gi|147782941|emb|CAN72294.1| hypothetical protein
           VITISV_037293 [Vitis vinifera]
           gi|297744178|emb|CBI37148.3| unnamed protein product
           [Vitis vinifera]
          Length = 423

 Score = 47.0 bits (110), Expect(2) = 6e-06
 Identities = 35/94 (37%), Positives = 47/94 (50%), Gaps = 8/94 (8%)
 Frame = +2

Query: 164 LTISCRKGGTSFEDLAEKLK***S*MSLTQFSGLEVIVKATDSVVFI*F*MYLVANNIFQ 343
           + I+CRKGGTS EDLAEK                ++IVK              V  ++FQ
Sbjct: 157 IIIACRKGGTSIEDLAEKFP--------------DMIVK--------------VPIDVFQ 188

Query: 344 GINDE--------YATKVEDKVASMEKVKKLHEI 421
           GI DE         A KV D+ AS+E+VKKL+++
Sbjct: 189 GITDEDAAKVVDGLAPKVADRNASIEQVKKLYKL 222



 Score = 27.7 bits (60), Expect(2) = 6e-06
 Identities = 11/15 (73%), Positives = 13/15 (86%)
 Frame = +1

Query: 1   MYFTIALDRTNAGPI 45
           MYF I LDR++AGPI
Sbjct: 143 MYFAITLDRSSAGPI 157


Top