BLASTX nr result

ID: Papaver23_contig00027061 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Papaver23_contig00027061
         (450 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002328907.1| predicted protein [Populus trichocarpa] gi|2...    62   5e-08
ref|XP_003605036.1| F-box protein [Medicago truncatula] gi|35550...    45   2e-07
emb|CAN75235.1| hypothetical protein VITISV_008502 [Vitis vinifera]    50   2e-07
ref|XP_002280424.1| PREDICTED: F-box/kelch-repeat protein At3g23...    50   2e-07
emb|CAN70931.1| hypothetical protein VITISV_034638 [Vitis vinifera]    47   3e-07

>ref|XP_002328907.1| predicted protein [Populus trichocarpa] gi|222839337|gb|EEE77674.1|
           predicted protein [Populus trichocarpa]
          Length = 374

 Score = 62.0 bits (149), Expect = 5e-08
 Identities = 35/107 (32%), Positives = 56/107 (52%)
 Frame = +2

Query: 125 ARNWYALITSSDFIKSHFDLTVQKNNPILMVISYNTKVIYSIDYDSLVSAISEYETYSID 304
           ++ W +LI+  +F+K+H   T +  N     I  +T    SID ++   A     T  + 
Sbjct: 32  SKTWRSLISHPEFVKNHLKRTKEDTNANHYKIFLSTDPHLSIDPEAYFDADDNLLTTQLK 91

Query: 305 NKIDYPFKSLGYDVELLGSCDGIICIWLRDNPTLRIFLCLWNPATRE 445
             + YP  S    +E+LGSC+G++C  + DNP + I    WNP+TRE
Sbjct: 92  FPVSYPEYSY---IEILGSCNGLVCGLIHDNPLIYI----WNPSTRE 131


>ref|XP_003605036.1| F-box protein [Medicago truncatula] gi|355506091|gb|AES87233.1|
           F-box protein [Medicago truncatula]
          Length = 370

 Score = 45.1 bits (105), Expect(2) = 2e-07
 Identities = 27/102 (26%), Positives = 47/102 (46%)
 Frame = +2

Query: 134 WYALITSSDFIKSHFDLTVQKNNPILMVISYNTKVIYSIDYDSLVSAISEYETYSIDNKI 313
           W ++I+   F  SHF L + K+    + IS  +  I SID+D+ ++       ++     
Sbjct: 30  WISIISDPQFANSHFQLNLTKHTRRFLCISALSPEIRSIDFDAFLNDAPASPNFNCSLPD 89

Query: 314 DYPFKSLGYDVELLGSCDGIICIWLRDNPTLRIFLCLWNPAT 439
            Y      +  E+ GSC G I ++   N      + +WNP+T
Sbjct: 90  SY------FPFEIKGSCRGFIFMYRHPN------IYIWNPST 119



 Score = 35.0 bits (79), Expect(2) = 2e-07
 Identities = 15/26 (57%), Positives = 21/26 (80%)
 Frame = +1

Query: 52  IPEEIYHEILLRLPVKSLLVCKSVCK 129
           +P+E+  + LLRLPVKSL++ K VCK
Sbjct: 3   LPQELILQTLLRLPVKSLILFKCVCK 28


>emb|CAN75235.1| hypothetical protein VITISV_008502 [Vitis vinifera]
          Length = 453

 Score = 50.1 bits (118), Expect(2) = 2e-07
 Identities = 31/111 (27%), Positives = 55/111 (49%), Gaps = 3/111 (2%)
 Frame = +2

Query: 125 ARNWYALITSSDFIKSHFDLTVQKNNPILMVISYNTKVIY---SIDYDSLVSAISEYETY 295
           +++W  +I+  DF K    +  + +  +     YN+++I    S+   S   +   YE  
Sbjct: 50  SKSWREMISDPDFEKKQLAVAARDSGEV-----YNSRLIMHYPSMKLKSCPLSCLFYEPV 104

Query: 296 SIDNKIDYPFKSLGYDVELLGSCDGIICIWLRDNPTLRIFLCLWNPATREY 448
                 +YP   LG   E++GS +G++C  +RD     IF  +WNP+TRE+
Sbjct: 105 GHSVNHEYPGSELGAMNEIIGSYNGLVCFCIRDTENDIIF--VWNPSTREF 153



 Score = 29.6 bits (65), Expect(2) = 2e-07
 Identities = 16/26 (61%), Positives = 18/26 (69%)
 Frame = +1

Query: 52  IPEEIYHEILLRLPVKSLLVCKSVCK 129
           IP+EI  EIL  LPVKSL+  K V K
Sbjct: 26  IPDEIILEILCLLPVKSLMRFKCVSK 51


>ref|XP_002280424.1| PREDICTED: F-box/kelch-repeat protein At3g23880-like [Vitis
           vinifera]
          Length = 397

 Score = 50.1 bits (118), Expect(2) = 2e-07
 Identities = 31/111 (27%), Positives = 55/111 (49%), Gaps = 3/111 (2%)
 Frame = +2

Query: 125 ARNWYALITSSDFIKSHFDLTVQKNNPILMVISYNTKVIY---SIDYDSLVSAISEYETY 295
           +++W  +I+  DF K    +  + +  +     YN+++I    S+   S   +   YE  
Sbjct: 50  SKSWREMISDPDFEKKQLAVAARDSGEV-----YNSRLIMHYPSMKLKSCPLSCLFYEPV 104

Query: 296 SIDNKIDYPFKSLGYDVELLGSCDGIICIWLRDNPTLRIFLCLWNPATREY 448
                 +YP   LG   E++GS +G++C  +RD     IF  +WNP+TRE+
Sbjct: 105 GHSVNHEYPGSELGAMNEIIGSYNGLVCFCIRDTENDIIF--VWNPSTREF 153



 Score = 29.6 bits (65), Expect(2) = 2e-07
 Identities = 16/26 (61%), Positives = 18/26 (69%)
 Frame = +1

Query: 52  IPEEIYHEILLRLPVKSLLVCKSVCK 129
           IP+EI  EIL  LPVKSL+  K V K
Sbjct: 26  IPDEIILEILCLLPVKSLMRFKCVSK 51


>emb|CAN70931.1| hypothetical protein VITISV_034638 [Vitis vinifera]
          Length = 265

 Score = 46.6 bits (109), Expect(2) = 3e-07
 Identities = 30/106 (28%), Positives = 54/106 (50%)
 Frame = +2

Query: 128 RNWYALITSSDFIKSHFDLTVQKNNPILMVISYNTKVIYSIDYDSLVSAISEYETYSIDN 307
           ++W  +I+  +F K   ++  +++  +  +          I   SL S   E   YSI++
Sbjct: 29  KSWRLMISDPEFAKKQLNVATKESGKLDKLRLILHSPYLRIKSCSLPSLFYEPFGYSINH 88

Query: 308 KIDYPFKSLGYDVELLGSCDGIICIWLRDNPTLRIFLCLWNPATRE 445
             DYP + LG   E++G  +G++CI +RD     IF  +WNP+ +E
Sbjct: 89  --DYPGRDLGVINEIVGCYNGLVCISIRDMEKDTIF--VWNPSIKE 130



 Score = 32.7 bits (73), Expect(2) = 3e-07
 Identities = 17/29 (58%), Positives = 19/29 (65%)
 Frame = +1

Query: 43  MSSIPEEIYHEILLRLPVKSLLVCKSVCK 129
           M  +P EI  EIL  LPVKSL+  K VCK
Sbjct: 1   MPHLPNEIILEILSLLPVKSLMRFKCVCK 29


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