BLASTX nr result
ID: Papaver23_contig00027022
seq
BLASTX 2.2.25 [Feb-01-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= Papaver23_contig00027022
(709 letters)
Database: ./nr
23,641,837 sequences; 8,123,359,852 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
ref|XP_003542805.1| PREDICTED: DNA-directed RNA polymerase I sub... 248 1e-63
ref|XP_003550091.1| PREDICTED: DNA-directed RNA polymerase I sub... 245 7e-63
ref|XP_004163996.1| PREDICTED: probable DNA-directed RNA polymer... 227 2e-57
ref|XP_004146776.1| PREDICTED: DNA-directed RNA polymerase I sub... 226 4e-57
ref|XP_003574126.1| PREDICTED: DNA-directed RNA polymerase I sub... 223 2e-56
>ref|XP_003542805.1| PREDICTED: DNA-directed RNA polymerase I subunit RPA2-like [Glycine
max]
Length = 1175
Score = 248 bits (632), Expect = 1e-63
Identities = 123/206 (59%), Positives = 158/206 (76%), Gaps = 5/206 (2%)
Frame = +1
Query: 106 EFENLRELFKPHIESFNYFTGDGIEKILVNIKPVEINSD--GHTLRIWFDNHKLDSPVRD 279
+FE LRELFK HIESF+Y G++ +L +IKPVE+ D LRIW DN L P ++
Sbjct: 10 DFEALRELFKHHIESFDYMVDAGLDTMLGHIKPVEVFDDFTSTKLRIWLDNPVLYPPQKE 69
Query: 280 K---GLDVKLYPYECRQAGISYEGKINIGVCYQYDKGPVIRKDISFGKIPIMLMSNKCNL 450
+ + L P+ECRQA ISY GKI I VC+QY+ GP+IR++++FG+ PIML S CNL
Sbjct: 70 RISRTMREALLPFECRQAKISYSGKITIDVCFQYNDGPIIRENVNFGQFPIMLQSKLCNL 129
Query: 451 EGADPAKLVSYKEEATEMGGYFIAKGLERLVRMNIMQKRNFPMNVERSSFREKQDGYTDK 630
GADP KLVSYKEEA+EMGGYFI GLER+VR+ I+ KRN+PM++ R+SF ++++GYTDK
Sbjct: 130 RGADPQKLVSYKEEASEMGGYFILNGLERVVRLLILPKRNYPMSMVRNSFSDRREGYTDK 189
Query: 631 AVVIRCVREDMSSLTLRLYYLQNGSA 708
AVVIRCVR D SSL++RLYYL+NGSA
Sbjct: 190 AVVIRCVRADQSSLSVRLYYLRNGSA 215
>ref|XP_003550091.1| PREDICTED: DNA-directed RNA polymerase I subunit RPA2-like [Glycine
max]
Length = 1175
Score = 245 bits (625), Expect = 7e-63
Identities = 121/206 (58%), Positives = 157/206 (76%), Gaps = 5/206 (2%)
Frame = +1
Query: 106 EFENLRELFKPHIESFNYFTGDGIEKILVNIKPVEINSD--GHTLRIWFDNHKLDSPVRD 279
+FE LRELFK HIESF+Y G+E +L +IKP+E+ D LRIW DN L P ++
Sbjct: 10 DFEALRELFKHHIESFDYMADAGLETMLRHIKPIEVFDDFTSTKLRIWLDNPVLYPPQKE 69
Query: 280 K---GLDVKLYPYECRQAGISYEGKINIGVCYQYDKGPVIRKDISFGKIPIMLMSNKCNL 450
+ + L P+ECRQA ISY GKI I VC+QY+ GP+IR++I+FG+ PIML S CNL
Sbjct: 70 RISRTMREALLPFECRQAKISYAGKITIDVCFQYNDGPIIRENINFGQFPIMLQSKLCNL 129
Query: 451 EGADPAKLVSYKEEATEMGGYFIAKGLERLVRMNIMQKRNFPMNVERSSFREKQDGYTDK 630
GADP KLVSY+EEA+EMGGYFI GLER++R+ I+ KRN PM++ R+SF ++++GYTDK
Sbjct: 130 RGADPQKLVSYREEASEMGGYFILNGLERVIRLLILPKRNHPMSMVRNSFSDRREGYTDK 189
Query: 631 AVVIRCVREDMSSLTLRLYYLQNGSA 708
A+VIRCVR D SSL++RLYYL+NGSA
Sbjct: 190 AIVIRCVRADQSSLSVRLYYLRNGSA 215
>ref|XP_004163996.1| PREDICTED: probable DNA-directed RNA polymerase I subunit
RPA2-like, partial [Cucumis sativus]
Length = 948
Score = 227 bits (578), Expect = 2e-57
Identities = 113/209 (54%), Positives = 151/209 (72%), Gaps = 5/209 (2%)
Frame = +1
Query: 97 QKKEFENLRELFKPHIESFNYFTGDGIEKILVNIKPVEINSD--GHTLRIWFDNHKLDSP 270
+ +++E LRELF+ HIESF++ G+E ++ +IKPVEI LRIW +L P
Sbjct: 7 ENEDYEALRELFRHHIESFDHLVDAGLETLMNSIKPVEIYDSFTNKKLRIWLGKPELYPP 66
Query: 271 VRDKGLDV---KLYPYECRQAGISYEGKINIGVCYQYDKGPVIRKDISFGKIPIMLMSNK 441
+++ L L PYECRQA ISY GK VC+QYD+ VIR+ ++FG+ PIML S
Sbjct: 67 QKERNLRTIREALLPYECRQAKISYTGKFMADVCFQYDEKAVIREKLNFGQFPIMLKSKL 126
Query: 442 CNLEGADPAKLVSYKEEATEMGGYFIAKGLERLVRMNIMQKRNFPMNVERSSFREKQDGY 621
C+L G DP KLVSY EEA+EMGGYF+ GLER+VR+ I KRN+P ++ R+SF ++++GY
Sbjct: 127 CHLRGLDPKKLVSYNEEASEMGGYFVMNGLERVVRLLIAPKRNYPTSMVRNSFSDRREGY 186
Query: 622 TDKAVVIRCVREDMSSLTLRLYYLQNGSA 708
TDKAVVIRCVRED SS+T++LYYL+NGSA
Sbjct: 187 TDKAVVIRCVREDQSSVTVKLYYLRNGSA 215
>ref|XP_004146776.1| PREDICTED: DNA-directed RNA polymerase I subunit RPA2-like [Cucumis
sativus]
Length = 1173
Score = 226 bits (576), Expect = 4e-57
Identities = 113/209 (54%), Positives = 150/209 (71%), Gaps = 5/209 (2%)
Frame = +1
Query: 97 QKKEFENLRELFKPHIESFNYFTGDGIEKILVNIKPVEINSD--GHTLRIWFDNHKLDSP 270
+ +++E LRELF+ HIESF++ G+E ++ +IKPVEI LRIW +L P
Sbjct: 7 ENEDYEALRELFRHHIESFDHLVDAGLETLMNSIKPVEIYDSFTNKKLRIWLGKPELYPP 66
Query: 271 VRDKGLDV---KLYPYECRQAGISYEGKINIGVCYQYDKGPVIRKDISFGKIPIMLMSNK 441
+++ L L PYECRQA ISY GK VC+QYD+ VIR+ +FG+ PIML S
Sbjct: 67 QKERNLRTIREALLPYECRQAKISYTGKFMADVCFQYDEKAVIREKFNFGQFPIMLKSKL 126
Query: 442 CNLEGADPAKLVSYKEEATEMGGYFIAKGLERLVRMNIMQKRNFPMNVERSSFREKQDGY 621
C+L G DP KLVSY EEA+EMGGYF+ GLER+VR+ I KRN+P ++ R+SF ++++GY
Sbjct: 127 CHLRGLDPKKLVSYNEEASEMGGYFVMNGLERVVRLLIAPKRNYPTSMVRNSFSDRREGY 186
Query: 622 TDKAVVIRCVREDMSSLTLRLYYLQNGSA 708
TDKAVVIRCVRED SS+T++LYYL+NGSA
Sbjct: 187 TDKAVVIRCVREDQSSVTVKLYYLRNGSA 215
>ref|XP_003574126.1| PREDICTED: DNA-directed RNA polymerase I subunit RPA2 [Brachypodium
distachyon]
Length = 1181
Score = 223 bits (569), Expect = 2e-56
Identities = 106/203 (52%), Positives = 151/203 (74%), Gaps = 2/203 (0%)
Frame = +1
Query: 106 EFENLRELFKPHIESFNYFTGDGIEKILVNIKPVEIN--SDGHTLRIWFDNHKLDSPVRD 279
E+ LREL++PHIESF+YF +G++K+L++I+P++I+ S TLRI + L P+RD
Sbjct: 19 EYATLRELYRPHIESFDYFLDEGLDKMLLSIRPMDISHPSSSDTLRISLEKGHLLPPLRD 78
Query: 280 KGLDVKLYPYECRQAGISYEGKINIGVCYQYDKGPVIRKDISFGKIPIMLMSNKCNLEGA 459
+ LYP ECRQA ISY G+ + +Q++ G +R+ +FG +PIMLMS C+L GA
Sbjct: 79 VRMAKPLYPQECRQARISYSGEFKVDTLFQFNNGAPMRQTFNFGHLPIMLMSKLCHLRGA 138
Query: 460 DPAKLVSYKEEATEMGGYFIAKGLERLVRMNIMQKRNFPMNVERSSFREKQDGYTDKAVV 639
D KL+ + EEATEMGGYFI G+ERL+R+ ++QKRN+PM + R +F ++ GYTDKAVV
Sbjct: 139 DSRKLIYHGEEATEMGGYFINGGMERLIRILVLQKRNYPMGMVRGAFEKRGPGYTDKAVV 198
Query: 640 IRCVREDMSSLTLRLYYLQNGSA 708
IRCV++D +S+T++LYYLQNGSA
Sbjct: 199 IRCVQQDQTSVTVKLYYLQNGSA 221